# STOCKHOLM 1.0
#=GF ID 2.40.70.10/FF/10112
#=GF DE Gag-pro-pol polyprotein
#=GF AC 2.40.70.10/FF/10112
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 10.019
#=GS A7KWZ1/421-537      AC A7KWZ1
#=GS A7KWZ1/421-537      OS Bovine leukemia virus
#=GS A7KWZ1/421-537      DE Gag-pro-pol polyprotein
#=GS A7KWZ1/421-537      DR GENE3D; 1b38411fd5d2dbb632446031a5f7852c/421-537; 
#=GS A7KWZ1/421-537      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS L0PI28/421-537      AC L0PI28
#=GS L0PI28/421-537      OS Bovine leukemia virus
#=GS L0PI28/421-537      DE Gag-pro-pol polyprotein
#=GS L0PI28/421-537      DR GENE3D; 706de6431cc9d34a984d1b49b4226684/421-537; 
#=GS L0PI28/421-537      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS O91333/44-160       AC O91333
#=GS O91333/44-160       OS Bovine leukemia virus
#=GS O91333/44-160       DE Protease
#=GS O91333/44-160       DR GENE3D; 8025d00eef34ef22a5fd215492f5a792/44-160; 
#=GS O91333/44-160       DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS P10270/44-160       AC P10270
#=GS P10270/44-160       OS Bovine leukemia virus (JAPANESE ISOLATE BLV-1)
#=GS P10270/44-160       DE Protease
#=GS P10270/44-160       DR GENE3D; a61904874864005edf87f6de30ff2a16/44-160; 
#=GS P10270/44-160       DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS A0A0E3VNR8/421-537  AC A0A0E3VNR8
#=GS A0A0E3VNR8/421-537  OS Bovine leukemia virus
#=GS A0A0E3VNR8/421-537  DE Polyprotein
#=GS A0A0E3VNR8/421-537  DR GENE3D; aa7b57bb1bd79401b98c95ab996c517a/421-537; 
#=GS A0A0E3VNR8/421-537  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS Q9YNE4/1-99         AC Q9YNE4
#=GS Q9YNE4/1-99         OS Bovine leukemia virus
#=GS Q9YNE4/1-99         DE Protease
#=GS Q9YNE4/1-99         DR GENE3D; b7123b2e919e0b8ad5c377bac5eea669/1-99; 
#=GS Q9YNE4/1-99         DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GF TC 230.1 9.6E-73
#=GF SQ 6
A7KWZ1/421-537              LSIPLARSRPSVAVYLSGPWLQPSQNQALMLVDTGAENTVLPQNWLVRDYPRIPAAVLGAGGVSRNRYNWLQGPLTLALKPEGPFITIPKILVDTFDKWQILGRDVLSRLQASISIP
L0PI28/421-537              LSIPLARSRPSVAVYLSGPWLQPSQNQALMLVDTGAENTVLPQNWLVRDYPRIPAAVLGAGGVSRNRYNWLQGPLTLALKPEGPFITIPKILVDTFDKWQILGRDVLSRLQASISIP
O91333/44-160               LSIPLARSRPSVAVYLSGPWLQPSQNQALMLVDTGAENTVLPQNWLVRDYPRIPAAVLGAGGVSRNRYNWLQGPLTLALKPEGPFITIPKILVDTFDKWQILGRDVLSCLQASISIP
P10270/44-160               LSIPLARSRPSVAVYLSGPWLQPSQNQALMLVDTGAENTVLPQNWLVRDYPRIPAAVLGAGGVSRNRYNWLQGPLTLALKPEGPFITIPKILVDTFDKWQILGRDVLSRLQASISIP
A0A0E3VNR8/421-537          LSIPLARSRPSVAVYLSGPWLQPSQNQALMLVDTGAENTVLPQNWLVRDYPRIPAAVLGAGGVSRNRYNWLQGPLTLALKPEGPFITIPKILVDTFDKWQILGRDVLSRLQASISIP
Q9YNE4/1-99                 ------------------PWLQPSQNQALMLVDTGAENTVLPQNWLVRDYPRIPAAVLGAGGVSRNRYNWLQGPLTLALKPEGPFITIPKILVDTFDKWQILGRDVLSRLQASISIP
#=GC scorecons              222222222222222222999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999799999999
#=GC scorecons_70           __________________***************************************************************************************************
#=GC scorecons_80           __________________******************************************************************************************_********
#=GC scorecons_90           __________________******************************************************************************************_********
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