# STOCKHOLM 1.0
#=GF ID 2.40.270.10/FF/3671
#=GF DE DNA-directed RNA polymerase
#=GF AC 2.40.270.10/FF/3671
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 39.581
#=GS A0A0P5VIK1/438-473_579-686           AC A0A0P5VIK1
#=GS A0A0P5VIK1/438-473_579-686           OS Daphnia magna
#=GS A0A0P5VIK1/438-473_579-686           DE DNA-directed RNA polymerase subunit beta
#=GS A0A0P5VIK1/438-473_579-686           DR GENE3D; 933286867cf229b3ce4c24877335bb97/438-473_579-686; 
#=GS A0A0P5VIK1/438-473_579-686           DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P5VIK1/438-473_579-686           DR EC; 2.7.7.6; 
#=GS A0A0V1IYE8/624-653_670-723_839-996   AC A0A0V1IYE8
#=GS A0A0V1IYE8/624-653_670-723_839-996   OS Trichinella pseudospiralis
#=GS A0A0V1IYE8/624-653_670-723_839-996   DE DNA-directed RNA polymerase subunit beta
#=GS A0A0V1IYE8/624-653_670-723_839-996   DR GENE3D; 2b179f27c5a24e4d823a70b6a0fb34b3/624-653_670-723_839-996; 
#=GS A0A0V1IYE8/624-653_670-723_839-996   DR ORG; Eukaryota; Metazoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella; Trichinella pseudospiralis; 
#=GS A0A0V1IYE8/624-653_670-723_839-996   DR EC; 2.7.7.6; 
#=GS A0A0V1IWY6/667-696_713-766_860-1017  AC A0A0V1IWY6
#=GS A0A0V1IWY6/667-696_713-766_860-1017  OS Trichinella pseudospiralis
#=GS A0A0V1IWY6/667-696_713-766_860-1017  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0V1IWY6/667-696_713-766_860-1017  DR GENE3D; 2b6b5b7255185a072331529d7028bd30/667-696_713-766_860-1017; 
#=GS A0A0V1IWY6/667-696_713-766_860-1017  DR ORG; Eukaryota; Metazoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella; Trichinella pseudospiralis; 
#=GS A0A0V1IWY6/667-696_713-766_860-1017  DR EC; 2.7.7.6; 
#=GS A0A0V1HFZ4/468-497_514-567_673-830   AC A0A0V1HFZ4
#=GS A0A0V1HFZ4/468-497_514-567_673-830   OS Trichinella pseudospiralis
#=GS A0A0V1HFZ4/468-497_514-567_673-830   DE DNA-directed RNA polymerase subunit beta
#=GS A0A0V1HFZ4/468-497_514-567_673-830   DR GENE3D; 2fc8b4eecee709ff361969c7b9cbb244/468-497_514-567_673-830; 
#=GS A0A0V1HFZ4/468-497_514-567_673-830   DR ORG; Eukaryota; Metazoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella; Trichinella pseudospiralis; 
#=GS A0A0V1HFZ4/468-497_514-567_673-830   DR EC; 2.7.7.6; 
#=GS A0A0V1IX03/667-696_713-766_882-1039  AC A0A0V1IX03
#=GS A0A0V1IX03/667-696_713-766_882-1039  OS Trichinella pseudospiralis
#=GS A0A0V1IX03/667-696_713-766_882-1039  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0V1IX03/667-696_713-766_882-1039  DR GENE3D; 96d67454f7bbb432134ceefb76e43ea8/667-696_713-766_882-1039; 
#=GS A0A0V1IX03/667-696_713-766_882-1039  DR ORG; Eukaryota; Metazoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella; Trichinella pseudospiralis; 
#=GS A0A0V1IX03/667-696_713-766_882-1039  DR EC; 2.7.7.6; 
#=GS A0A0V1HFC8/412-441_458-511_617-774   AC A0A0V1HFC8
#=GS A0A0V1HFC8/412-441_458-511_617-774   OS Trichinella pseudospiralis
#=GS A0A0V1HFC8/412-441_458-511_617-774   DE DNA-directed RNA polymerase subunit beta
#=GS A0A0V1HFC8/412-441_458-511_617-774   DR GENE3D; ba3897bfa38d601685175576b55e83a7/412-441_458-511_617-774; 
#=GS A0A0V1HFC8/412-441_458-511_617-774   DR ORG; Eukaryota; Metazoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella; Trichinella pseudospiralis; 
#=GS A0A0V1HFC8/412-441_458-511_617-774   DR EC; 2.7.7.6; 
#=GS Q95JH9/110-139_156-209_316-440       AC Q95JH9
#=GS Q95JH9/110-139_156-209_316-440       OS Macaca fascicularis
#=GS Q95JH9/110-139_156-209_316-440       DE Putative uncharacterized protein
#=GS Q95JH9/110-139_156-209_316-440       DR GENE3D; e24acd768b500e562a6064a435aee4b0/110-139_156-209_316-440; 
#=GS Q95JH9/110-139_156-209_316-440       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GF TC 207.9 1.2E-65
#=GF SQ 7
A0A0P5VIK1/438-473_579-686                   ------------------------------------------------XAMGTNAIVAVISYTGYDMEDAMVINRGSLQRGFAHPQIGDKFASRAGQKGICSQQWLTEDLPFTESGLVPDIVFNPHGFPSRMTIAMMIECMAGKSAAVHGIVHDATPFRFSEEHTAIDYHGKLLE------------------EAGYNYYGTEKLYSGVX--------------------------------
A0A0V1IYE8/624-653_670-723_839-996           AKMIPFPDHNQSPRNVYQCQMAKQTMGTPVPQSPLVKTESYDAYAIDNYPLGTNAIVAVISYTGYDMEDAMIINKASAERGFAHPFVGDKFASRHGQKGINSFLWPAENMPFTESGMVPDIIFNPHGFPSRMTVGMMIESMAGKSAALHGIKHDATPFKFSDEQPAVEYFGQLLTKGNNDLKNCLIKQLTSLIEAGYNYYGNERMYSGIDGRMLEVDIFFGVVYYQRLRHMVADKFQVRATG
A0A0V1IWY6/667-696_713-766_860-1017          AKMIPFPDHNQSPRNVYQCQMAKQTMGTPVPQSPLVKTESYDAYAIDNYPLGTNAIVAVISYTGYDMEDAMIINKASAERGFAHPFVGDKFASRHGQKGINSFLWPAENMPFTESGMVPDIIFNPHGFPSRMTVGMMIESMAGKSAALHGIKHDATPFKFSDEQPAVEYFGQLLTKGNNDLKNCLIKQLTSLIEAGYNYYGNERMYSGIDGRMLEVDIFFGVVYYQRLRHMVADKFQVRATG
A0A0V1HFZ4/468-497_514-567_673-830           AKMIPFPDHNQSPRNVYQCQMAKQTMGTPVPQSPLVKTESYDAYAIDNYPLGTNAIVAVISYTGYDMEDAMIINKASAERGFAHPFVGDKFASRHGQKGINSFLWPAENMPFTESGMVPDIIFNPHGFPSRMTVGMMIESMAGKSAALHGIKHDATPFKFSDEQPAVEYFGQLLTKGNNDLKNCLIKQLTSLIEAGYNYYGNERMYSGIDGRMLEVDIFFGVVYYQRLRHMVADKFQVRATG
A0A0V1IX03/667-696_713-766_882-1039          AKMIPFPDHNQSPRNVYQCQMAKQTMGTPVPQSPLVKTESYDAYAIDNYPLGTNAIVAVISYTGYDMEDAMIINKASAERGFAHPFVGDKFASRHGQKGINSFLWPAENMPFTESGMVPDIIFNPHGFPSRMTVGMMIESMAGKSAALHGIKHDATPFKFSDEQPAVEYFGQLLTKGNNDLKNCLIKQLTSLIEAGYNYYGNERMYSGIDGRMLEVDIFFGVVYYQRLRHMVADKFQVRATG
A0A0V1HFC8/412-441_458-511_617-774           AKMIPFPDHNQSPRNVYQCQMAKQTMGTPVPQSPLVKTESYDAYAIDNYPLGTNAIVAVISYTGYDMEDAMIINKASAERGFAHPFVGDKFASRHGQKGINSFLWPAENMPFTESGMVPDIIFNPHGFPSRMTVGMMIESMAGKSAALHGIKHDATPFKFSDEQPAVEYFGQLLTKGNNDLKNCLIKQLTSLIEAGYNYYGNERMYSGIDGRMLEVDIFFGVVYYQRLRHMVADKFQVRATG
Q95JH9/110-139_156-209_316-440               ANFIPFSDHNQSPRNMYQCQMGKQTMGFPLPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALEYFGEMLK------------------AAGYNFYGTERLYSGISGLELEADIFIGVVYYQR---------------
#=GC scorecons                               32233323333333323333323333323233333332223323223335599999999999999999999679659369999992699999994999993924956966999999699995999999999996597995999999969972999999499695495695957931111111111111111116999979959669996232233233323333333111111111111111
#=GC scorecons_70                            ___________________________________________________************************_*__******_********_*****_*__*__*_************_************_****_*******_***_******_****__*_**_*_**___________________********_*******_________________________________
#=GC scorecons_80                            ___________________________________________________********************_**__*__******__*******_*****_*__*__*__******_****_***********__****_*******_**__******_**_*__*__*_*_**____________________*******_*__***__________________________________
#=GC scorecons_90                            ___________________________________________________********************__*__*__******__*******_*****_*__*__*__******_****_***********__*_**_*******_**__******_**_*__*__*_*__*____________________****_**_*__***__________________________________
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