# STOCKHOLM 1.0
#=GF ID 2.40.270.10/FF/1732
#=GF DE RNA polymerase beta subunit
#=GF AC 2.40.270.10/FF/1732
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 89.099
#=GS F7XYL5/647-699_771-810      AC F7XYL5
#=GS F7XYL5/647-699_771-810      OS Candidatus Tremblaya princeps PCIT
#=GS F7XYL5/647-699_771-810      DE DNA-directed RNA polymerase subunit beta
#=GS F7XYL5/647-699_771-810      DR GENE3D; 08409adbcc12b7aeedf24404bd04e0b8/647-699_771-810; 
#=GS F7XYL5/647-699_771-810      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS F7XYL5/647-699_771-810      DR EC; 2.7.7.6; 
#=GS G0HIH6/647-699_771-810      AC G0HIH6
#=GS G0HIH6/647-699_771-810      OS Candidatus Tremblaya princeps PCVAL
#=GS G0HIH6/647-699_771-810      DE DNA-directed RNA polymerase subunit beta
#=GS G0HIH6/647-699_771-810      DR GENE3D; 08409adbcc12b7aeedf24404bd04e0b8/647-699_771-810; 
#=GS G0HIH6/647-699_771-810      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS G0HIH6/647-699_771-810      DR EC; 2.7.7.6; 
#=GS A0A0S4PU71/662-716_785-824  AC A0A0S4PU71
#=GS A0A0S4PU71/662-716_785-824  OS Armatimonadetes bacterium GXS
#=GS A0A0S4PU71/662-716_785-824  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0S4PU71/662-716_785-824  DR GENE3D; 1bd0bec0505f89c64e7309895313a1d0/662-716_785-824; 
#=GS A0A0S4PU71/662-716_785-824  DR ORG; Bacteria; Armatimonadetes; Armatimonadetes bacterium GXS; 
#=GS A0A0S4PU71/662-716_785-824  DR EC; 2.7.7.6; 
#=GS A0A0S4MY69/662-716_785-824  AC A0A0S4MY69
#=GS A0A0S4MY69/662-716_785-824  OS Armatimonadetes bacterium GBS
#=GS A0A0S4MY69/662-716_785-824  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0S4MY69/662-716_785-824  DR GENE3D; 1bd0bec0505f89c64e7309895313a1d0/662-716_785-824; 
#=GS A0A0S4MY69/662-716_785-824  DR ORG; Bacteria; Armatimonadetes; Armatimonadetes bacterium GBS; 
#=GS A0A0S4MY69/662-716_785-824  DR EC; 2.7.7.6; 
#=GS A0A1F6YSY2/532-586_653-692  AC A0A1F6YSY2
#=GS A0A1F6YSY2/532-586_653-692  OS Candidatus Nomurabacteria bacterium RIFOXYB1_FULL_39_16
#=GS A0A1F6YSY2/532-586_653-692  DE DNA-directed RNA polymerase subunit beta
#=GS A0A1F6YSY2/532-586_653-692  DR GENE3D; 3c331cee3ff2635b50cd4bb54a634c69/532-586_653-692; 
#=GS A0A1F6YSY2/532-586_653-692  DR ORG; Bacteria; Candidatus Nomurabacteria; Candidatus Nomurabacteria bacterium RIFOXYB1_FULL_39_16; 
#=GS A0A1F6YSY2/532-586_653-692  DR EC; 2.7.7.6; 
#=GS A0A0G0TVA7/532-586_653-692  AC A0A0G0TVA7
#=GS A0A0G0TVA7/532-586_653-692  OS Candidatus Nomurabacteria bacterium GW2011_GWF2_40_12
#=GS A0A0G0TVA7/532-586_653-692  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0G0TVA7/532-586_653-692  DR GENE3D; 3c331cee3ff2635b50cd4bb54a634c69/532-586_653-692; 
#=GS A0A0G0TVA7/532-586_653-692  DR ORG; Bacteria; Candidatus Nomurabacteria; Candidatus Nomurabacteria bacterium GW2011_GWF2_40_12; 
#=GS A0A0G0TVA7/532-586_653-692  DR EC; 2.7.7.6; 
#=GS A0A143WND2/649-701_773-812  AC A0A143WND2
#=GS A0A143WND2/649-701_773-812  OS Candidatus Tremblaya princeps
#=GS A0A143WND2/649-701_773-812  DE DNA-directed RNA polymerase subunit beta
#=GS A0A143WND2/649-701_773-812  DR GENE3D; 60220f0f6d61932d59fcdae423031d13/649-701_773-812; 
#=GS A0A143WND2/649-701_773-812  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS A0A143WND2/649-701_773-812  DR EC; 2.7.7.6; 
#=GS Q8KTP8/649-701_773-812      AC Q8KTP8
#=GS Q8KTP8/649-701_773-812      OS Candidatus Tremblaya princeps
#=GS Q8KTP8/649-701_773-812      DE DNA-directed RNA polymerase subunit beta
#=GS Q8KTP8/649-701_773-812      DR GENE3D; 8ada8afde9cec20aa7b4257fb0dde5eb/649-701_773-812; 
#=GS Q8KTP8/649-701_773-812      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS Q8KTP8/649-701_773-812      DR EC; 2.7.7.6; 
#=GS Q98Q23/658-712_784-823      AC Q98Q23
#=GS Q98Q23/658-712_784-823      OS Mycoplasma pulmonis UAB CTIP
#=GS Q98Q23/658-712_784-823      DE DNA-directed RNA polymerase subunit beta
#=GS Q98Q23/658-712_784-823      DR GENE3D; 941cb361df3913c372748173e2587ec5/658-712_784-823; 
#=GS Q98Q23/658-712_784-823      DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma pulmonis; 
#=GS Q98Q23/658-712_784-823      DR EC; 2.7.7.6; 
#=GS A0A143WN21/597-649_721-760  AC A0A143WN21
#=GS A0A143WN21/597-649_721-760  OS Candidatus Tremblaya princeps
#=GS A0A143WN21/597-649_721-760  DE DNA-directed RNA polymerase subunit beta
#=GS A0A143WN21/597-649_721-760  DR GENE3D; 9c6c2ffc95b733ad73f5ad5fca95fae9/597-649_721-760; 
#=GS A0A143WN21/597-649_721-760  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS A0A143WN21/597-649_721-760  DR EC; 2.7.7.6; 
#=GS A0A0A7P995/533-587_655-694  AC A0A0A7P995
#=GS A0A0A7P995/533-587_655-694  OS Candidatus Saccharibacteria oral taxon TM7x
#=GS A0A0A7P995/533-587_655-694  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0A7P995/533-587_655-694  DR GENE3D; 9f1386dde26767963879fef1dd87e9d4/533-587_655-694; 
#=GS A0A0A7P995/533-587_655-694  DR ORG; Bacteria; Candidatus Saccharibacteria; Candidatus Saccharibacteria oral taxon TM7x; 
#=GS A0A0A7P995/533-587_655-694  DR EC; 2.7.7.6; 
#=GS A0A1C3K948/647-699_771-810  AC A0A1C3K948
#=GS A0A1C3K948/647-699_771-810  OS Candidatus Tremblaya princeps
#=GS A0A1C3K948/647-699_771-810  DE DNA-directed RNA polymerase subunit beta
#=GS A0A1C3K948/647-699_771-810  DR GENE3D; ba589b350e2f110056dae6bc473b8e05/647-699_771-810; 
#=GS A0A1C3K948/647-699_771-810  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS A0A1C3K948/647-699_771-810  DR EC; 2.7.7.6; 
#=GS A0A143WPC5/649-701_773-812  AC A0A143WPC5
#=GS A0A143WPC5/649-701_773-812  OS Candidatus Tremblaya princeps
#=GS A0A143WPC5/649-701_773-812  DE DNA-directed RNA polymerase subunit beta
#=GS A0A143WPC5/649-701_773-812  DR GENE3D; bec03b8ff3b705d93a8336b8e922657e/649-701_773-812; 
#=GS A0A143WPC5/649-701_773-812  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Tremblaya; Candidatus Tremblaya princeps; 
#=GS A0A143WPC5/649-701_773-812  DR EC; 2.7.7.6; 
#=GS A0A0S4PDL8/662-716_785-824  AC A0A0S4PDL8
#=GS A0A0S4PDL8/662-716_785-824  OS Armatimonadetes bacterium DC
#=GS A0A0S4PDL8/662-716_785-824  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0S4PDL8/662-716_785-824  DR GENE3D; d06f2eed7959fe336419dc05f8ee578e/662-716_785-824; 
#=GS A0A0S4PDL8/662-716_785-824  DR ORG; Bacteria; Armatimonadetes; Armatimonadetes bacterium DC; 
#=GS A0A0S4PDL8/662-716_785-824  DR EC; 2.7.7.6; 
#=GS C7F6V4/72-126               AC C7F6V4
#=GS C7F6V4/72-126               OS Streptococcus pneumoniae
#=GS C7F6V4/72-126               DE RNA polymerase beta subunit
#=GS C7F6V4/72-126               DR GENE3D; 5f7f6195ad50ad7c2644ddc1ca214a74/72-126; 
#=GS C7F6V4/72-126               DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS X1EYC9/1-37_102-141         AC X1EYC9
#=GS X1EYC9/1-37_102-141         OS marine sediment metagenome
#=GS X1EYC9/1-37_102-141         DE Uncharacterized protein
#=GS X1EYC9/1-37_102-141         DR GENE3D; dec0c81c8c05b746a79ccbbe802ea7b9/1-37_102-141; 
#=GS X1EYC9/1-37_102-141         DR ORG; marine sediment metagenome; 
#=GS E5LP99/33-63                AC E5LP99
#=GS E5LP99/33-63                OS Mycoplasma sp. R1
#=GS E5LP99/33-63                DE RNA polymerase beta subunit
#=GS E5LP99/33-63                DR GENE3D; 60ba1382f277eb782cf98f1b0871edcb/33-63; 
#=GS E5LP99/33-63                DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma sp. R1; 
#=GF TC 63.7 1.5E-21
#=GF SQ 17
F7XYL5/647-699_771-810              --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRQPRVLTGMEQAVAQHAMCDGGVLALGRDVLVAFMPWDGYNYEDSVAVSEELRRNSTY
G0HIH6/647-699_771-810              --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRQPRVLTGMEQAVAQHAMCDGGVLALGRDVLVAFMPWDGYNYEDSVAVSEELRRNSTY
A0A0S4PU71/662-716_785-824          QAFSVSASMIPFLEHDDAGRALMGSNMQRQGVPLLNPEAPFVHTGVESHAAEYARTENGELALGRNVLVAFLPAGGYNYEDAVFVSQRLLYDDTY
A0A0S4MY69/662-716_785-824          QAFSVSASMIPFLEHDDAGRALMGSNMQRQGVPLLNPEAPFVHTGVESHAAEYARTENGELALGRNVLVAFLPAGGYNYEDAVFVSQRLLYDDTY
A0A1F6YSY2/532-586_653-692          QAFSIATSMIPFLEHNDANRSLMGSNMQKQAVPCVLPEMPIVATGIEELASRDSGTVNGQISLGQNIFVAFLSWSGSTYEDAIIVSERLVKKSKF
A0A0G0TVA7/532-586_653-692          QAFSIATSMIPFLEHNDANRSLMGSNMQKQAVPCVLPEMPIVATGIEELASRDSGTVNGQISLGQNIFVAFLSWSGSTYEDAIIVSERLVKKSKF
A0A143WND2/649-701_773-812          --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRKPRVHTGMEQAVAQHAMSEGGVLALGRDVLVAFMPWEGYNYEDSVAVSEGLLRNGAY
Q8KTP8/649-701_773-812              --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRKPRVHTGMEQAVAQHAMSEGGVLALGRDVLVAFMPWEGYNYEDSVAVSEALLRNGAY
Q98Q23/658-712_784-823              QMTSLAASSIPFLENNDANRALMGSNMQRQAVPLLFAEAPLVATGIEADIAKFSPFKDGEMALGKNVLVGFSTWNGYNYEDAIIVSERLVKDDVF
A0A143WN21/597-649_721-760          --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRQPRVHTGMEQAVAQHAMCAGGVLALGRDVLVAFMPWEGYNYEDSVAVSEALLRNGAY
A0A0A7P995/533-587_655-694          QILGSTAALVPFIEKTRVDRALTGSNMQRQAVPLLTPESATVGTGIEKAVAENSGIAGGEIALGKNLLVAFMPWGGYNMEDAIIMSRRLVEDDRL
A0A1C3K948/647-699_771-810          --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRQPRIHTGMEQAVAQHAMSAGGVLALGLDVLVAFMPWEGYNYEDSVAVSEALLRNGAY
A0A143WPC5/649-701_773-812          --LSAATATIPFLEHNDACRALMGSNMQRQAVPCCYPRQPRVFTGMEQAVAQHAMCDGGVLALGRDVLVAFMPWEGYNYEDSVAVSEGLLRNGAY
A0A0S4PDL8/662-716_785-824          QAFSVSASMIPFLEHDDAGRALMGSNMQRQGVPLLNPEAPFVHTGVESHAAEYARTENGELALGRNVLVAFLPAGGYNYEDAVFVSQRLLYDDTY
C7F6V4/72-126                       QVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSG----------------------------------------
X1EYC9/1-37_102-141                 ------------------NRALMGSNMQRQAVPLLKTEAPLVGTGMERFVGENSSTTNGVLSLGKNVLVGFVSFDGFNFEDAIIVSEKLCKNDSF
E5LP99/33-63                        ----------------------------------------------------------------KNVLVAFTTWNGYNYEDAIILNEKLVKDDVY
#=GC scorecons                      21343443255555435436566656666656633254362626646224533422235234554566767344375657755356537334435
#=GC scorecons_70                   ___________________*_*_*_***_*_**________*_**_*_____________________*_*____*___**_______*______
#=GC scorecons_80                   ____________________________________________________________________*_*____*___**_______*______
#=GC scorecons_90                   _______________________________________________________________________________________________
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