# STOCKHOLM 1.0
#=GF ID 2.40.10.120/FF/163
#=GF DE Genome polyprotein
#=GF AC 2.40.10.120/FF/163
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 38.820
#=GS Q01299/1505-1578  AC Q01299
#=GS Q01299/1505-1578  OS Tick-borne encephalitis virus (strain HYPR)
#=GS Q01299/1505-1578  DE Genome polyprotein
#=GS Q01299/1505-1578  DR GENE3D; b8fc46b0657a38123419a0cf70661292/1505-1578; 
#=GS Q01299/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Tick-borne encephalitis virus; 
#=GS Q01299/1505-1578  DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P22338/1505-1578  AC P22338
#=GS P22338/1505-1578  OS Louping ill virus
#=GS P22338/1505-1578  DE Genome polyprotein
#=GS P22338/1505-1578  DR GENE3D; cec19c09e1313d51eb34e0d5080b7b38/1505-1578; 
#=GS P22338/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Louping ill virus; 
#=GS P22338/1505-1578  DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P29837/1505-1578  AC P29837
#=GS P29837/1505-1578  OS Langat virus (strain TP21)
#=GS P29837/1505-1578  DE Genome polyprotein
#=GS P29837/1505-1578  DR GENE3D; c3fcad35ad9f1e02999e1fc63aa88206/1505-1578; 
#=GS P29837/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Langat virus; 
#=GS P29837/1505-1578  DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P14336/1505-1578  AC P14336
#=GS P14336/1505-1578  OS Tick-borne encephalitis virus (WESTERN SUBTYPE)
#=GS P14336/1505-1578  DE Genome polyprotein
#=GS P14336/1505-1578  DR GENE3D; 8370febd0d60080b615938960ebe3d60/1505-1578; 
#=GS P14336/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Tick-borne encephalitis virus; 
#=GS P14336/1505-1578  DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P07720/1505-1578  AC P07720
#=GS P07720/1505-1578  OS Tick-borne encephalitis virus (STRAIN SOFJIN)
#=GS P07720/1505-1578  DE Genome polyprotein
#=GS P07720/1505-1578  DR GENE3D; c63772494d5357262d7c81f3d05c13b0/1505-1578; 
#=GS P07720/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Tick-borne encephalitis virus; 
#=GS P07720/1505-1578  DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS Q04538/1505-1578  AC Q04538
#=GS Q04538/1505-1578  OS Tick-borne powassan virus (strain lb)
#=GS Q04538/1505-1578  DE Genome polyprotein
#=GS Q04538/1505-1578  DR GENE3D; 2557895a7ad2078cb23e3b39e0b29025/1505-1578; 
#=GS Q04538/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Powassan virus; 
#=GS Q04538/1505-1578  DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS G4XII4/1505-1578  AC G4XII4
#=GS G4XII4/1505-1578  OS Tick-borne encephalitis virus
#=GS G4XII4/1505-1578  DE Genome polyprotein
#=GS G4XII4/1505-1578  DR GENE3D; 28735b21d71744c967cb9dd82223000f/1505-1578; 
#=GS G4XII4/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Tick-borne encephalitis virus; 
#=GS G4XII4/1505-1578  DR GO; GO:0019079; 
#=GS A1X3E5/970-1043   AC A1X3E5
#=GS A1X3E5/970-1043   OS Alkhumra hemorrhagic fever virus
#=GS A1X3E5/970-1043   DE Genome polyprotein
#=GS A1X3E5/970-1043   DR GENE3D; 2dbc6fdfd6d0dba6190793d2efca2566/970-1043; 
#=GS A1X3E5/970-1043   DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Kyasanur forest disease virus; 
#=GS I1VEB1/1505-1578  AC I1VEB1
#=GS I1VEB1/1505-1578  OS Tick-borne encephalitis virus
#=GS I1VEB1/1505-1578  DE Genome polyprotein
#=GS I1VEB1/1505-1578  DR GENE3D; d9e35748a115034fdb7b802f1eb2898f/1505-1578; 
#=GS I1VEB1/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Tick-borne encephalitis virus; 
#=GS Q91B85/1507-1580  AC Q91B85
#=GS Q91B85/1507-1580  OS Alkhumra hemorrhagic fever virus
#=GS Q91B85/1507-1580  DE Genome polyprotein
#=GS Q91B85/1507-1580  DR GENE3D; f42e66a53abacf41539c1f5ac24c029e/1507-1580; 
#=GS Q91B85/1507-1580  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Kyasanur forest disease virus; 
#=GS Q88489/1505-1578  AC Q88489
#=GS Q88489/1505-1578  OS Tick-borne encephalitis virus
#=GS Q88489/1505-1578  DE Genome polyprotein
#=GS Q88489/1505-1578  DR GENE3D; 24d92d1fd439a856607a6ce29291aacf/1505-1578; 
#=GS Q88489/1505-1578  DR ORG; Viruses; Flaviviridae; Flavivirus; tick-borne encephalitis virus group; Tick-borne encephalitis virus; 
#=GF TC 161.6 1.7E-51
#=GF SQ 11
Q01299/1505-1578          RPFEVKDGVYRIFSPGLFWGQNQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVREDVVCYGGAWSLE
P22338/1505-1578          RPFEVKDGVYRIFSPGLFWGQRQVGVGYGHKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLE
P29837/1505-1578          RPLDVKNGVYRIYTPGLLWGQRQIGVGYGAKGVLHTMWHVTRGAALLVDGVAVGPYWADVREDVVCYGGAWSLE
P14336/1505-1578          RPFEVKDGVYRIFSPGLFWGQNQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVREDVVCYGGAWSLE
P07720/1505-1578          RPFEVKDGVYRIFSPGLLWGQRQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLE
Q04538/1505-1578          RSFDIKEGVYRIYAPGLFWGYRQIGVGYGTKGVLHTMWHVTRGAALSVEGATSGPYWADVREDVVCYGGAWGLD
G4XII4/1505-1578          RPFEVKDGVYRIFSPGLLWGQRQVGVGYGSKGVLHTMWHVTRGAALYIDDAVAGPYWADVKEDVVCYGGAWSLE
A1X3E5/970-1043           RPFEIKDGAYRIYSPGLLWGHRQIGVGYGAKGVLHTMWHVTRGAALVVEEAISGPYWADVREDVVCYGGAWSLE
I1VEB1/1505-1578          RPFEVRDGVYRIFSPGLLWGQRQVGVGYGFKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLE
Q91B85/1507-1580          RPFEIKDGAYRIYSPGLLWGHRQIGVGYGAKGVLHTMWHVTRGAALVVEEAISGPYWADVREDVVCYGGAWSLE
Q88489/1505-1578          RPFEVKDGVYRIFSPGLFWGQNQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWSDVREDVVCYGGAWSLE
#=GC scorecons            97777869699976999699669799999499999999999999994775755999989979999999999797
#=GC scorecons_70         ********************_********_****************_**_*__*********************
#=GC scorecons_80         ****_*_*_****_***_**__*_*****_****************____*__*********************
#=GC scorecons_90         *____*_*_***__***_**__*_*****_****************_______*******_**********_*_
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