# STOCKHOLM 1.0
#=GF ID 2.40.10.10/FF/28129
#=GF DE Replicase polyprotein 1ab
#=GF AC 2.40.10.10/FF/28129
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 14.963
#=GS P0C6Y5/2893-2976  AC P0C6Y5
#=GS P0C6Y5/2893-2976  OS Porcine transmissible gastroenteritis coronavirus strain Purdue
#=GS P0C6Y5/2893-2976  DE Replicase polyprotein 1ab
#=GS P0C6Y5/2893-2976  DR GENE3D; 39406f63e9b1b0cfa745de6e6e9f5783/2893-2976; 
#=GS P0C6Y5/2893-2976  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS P0C6Y5/2893-2976  DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS F1CNY5/2893-2976  AC F1CNY5
#=GS F1CNY5/2893-2976  OS Transmissible gastroenteritis virus
#=GS F1CNY5/2893-2976  DE Replicase
#=GS F1CNY5/2893-2976  DR GENE3D; 21cc0a2348ee15c345ba8c37cb9274ab/2893-2976; 
#=GS F1CNY5/2893-2976  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS F1CNY5/2893-2976  DR EC; 3.4.19.12; 
#=GS Q98VG9/2918-3001  AC Q98VG9
#=GS Q98VG9/2918-3001  OS Feline infectious peritonitis virus (strain 79-1146)
#=GS Q98VG9/2918-3001  DE Replicase polyprotein 1ab
#=GS Q98VG9/2918-3001  DR GENE3D; 90e5048a7dffa563142658f88916a85a/2918-3001; 
#=GS Q98VG9/2918-3001  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS Q98VG9/2918-3001  DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS P0C6V2/2893-2976  AC P0C6V2
#=GS P0C6V2/2893-2976  OS Porcine transmissible gastroenteritis coronavirus strain Purdue
#=GS P0C6V2/2893-2976  DE Replicase polyprotein 1a
#=GS P0C6V2/2893-2976  DR GENE3D; 21cc0a2348ee15c345ba8c37cb9274ab/2893-2976; 
#=GS P0C6V2/2893-2976  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS P0C6V2/2893-2976  DR EC; 3.4.19.12; 
#=GS J7FAC6/2827-2910  AC J7FAC6
#=GS J7FAC6/2827-2910  OS Feline coronavirus
#=GS J7FAC6/2827-2910  DE 1a polyprotein
#=GS J7FAC6/2827-2910  DR GENE3D; 7a2a875f8f807c928daa988843c06889/2827-2910; 
#=GS J7FAC6/2827-2910  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS B7T060/448-531    AC B7T060
#=GS B7T060/448-531    OS Canine coronavirus
#=GS B7T060/448-531    DE Polyprotein 1a
#=GS B7T060/448-531    DR GENE3D; eb340f057608f575ac4721cd310127cf/448-531; 
#=GS B7T060/448-531    DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS B7T070/448-531    AC B7T070
#=GS B7T070/448-531    OS Canine coronavirus
#=GS B7T070/448-531    DE Polyprotein 1ab
#=GS B7T070/448-531    DR GENE3D; 185c81606520a76a3dcb9fc70402e0ad/448-531; 
#=GS B7T070/448-531    DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS T1STP3/2883-2966  AC T1STP3
#=GS T1STP3/2883-2966  OS Feline coronavirus
#=GS T1STP3/2883-2966  DE ORF1a polyprotein
#=GS T1STP3/2883-2966  DR GENE3D; 62eca9d929de78ee4ab2a2cc7554050a/2883-2966; 
#=GS T1STP3/2883-2966  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS B0LJR0/2907-2990  AC B0LJR0
#=GS B0LJR0/2907-2990  OS Feline coronavirus
#=GS B0LJR0/2907-2990  DE Polyprotein 1a
#=GS B0LJR0/2907-2990  DR GENE3D; 1a26922d472d9f1f5ca078837709ff88/2907-2990; 
#=GS B0LJR0/2907-2990  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS J7FAV5/2827-2910  AC J7FAV5
#=GS J7FAV5/2827-2910  OS Feline coronavirus
#=GS J7FAV5/2827-2910  DE 1ab polyprotein
#=GS J7FAV5/2827-2910  DR GENE3D; da1755067d37774997ddb21d9376fe3a/2827-2910; 
#=GS J7FAV5/2827-2910  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS C6GHB6/2905-2988  AC C6GHB6
#=GS C6GHB6/2905-2988  OS Feline coronavirus UU4
#=GS C6GHB6/2905-2988  DE Orf1a polyprotein
#=GS C6GHB6/2905-2988  DR GENE3D; 5cefec57ca46cf16631d90127adb0b72/2905-2988; 
#=GS C6GHB6/2905-2988  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GS C6GHB5/2905-2988  AC C6GHB5
#=GS C6GHB5/2905-2988  OS Feline coronavirus UU4
#=GS C6GHB5/2905-2988  DE Orf1ab polyprotein
#=GS C6GHB5/2905-2988  DR GENE3D; bad7820a43ea91efa124a7d23b550691/2905-2988; 
#=GS C6GHB5/2905-2988  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Alphacoronavirus 1; 
#=GF TC 192.5 4.2E-61
#=GF SQ 12
P0C6Y5/2893-2976          PCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTP
F1CNY5/2893-2976          PCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTP
Q98VG9/2918-3001          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYENELSSVRLHNFSIAKNNAFLGVVSAKYKGVNLVLKVNQVNPNTP
P0C6V2/2893-2976          PCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTP
J7FAC6/2827-2910          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYENELSSVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTP
B7T060/448-531            PCIVRVSYGNNVLNGLWLGDEVFCPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSAKYKGVNLVLKVNQVNPNTP
B7T070/448-531            PCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEISSVRLHNFSVSKNNVFLGVVSAKYKGVNLVLKVNQVNPNTP
T1STP3/2883-2966          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSSVRLHNFSIAKNNVFLGVVSARYKGVNLILKVSQVNPNTP
B0LJR0/2907-2990          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYENELSSVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTP
J7FAV5/2827-2910          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYENELSSVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTP
C6GHB6/2905-2988          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYENELSSVRLHNFSIAKNNVFLGVVSAKYKGVNLMLKVNQVNPNTP
C6GHB5/2905-2988          PCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYENELSSVRLHNFSIAKNNVFLGVVSAKYKGVNLMLKVNQVNPNTP
#=GC scorecons            999999699999999999999979999999999699999899699999999976999899999997999999799979999999
#=GC scorecons_70         ******_**************************_*******************_******************************
#=GC scorecons_80         ******_**************************_********_*********__***********_******_***********
#=GC scorecons_90         ******_***************_**********_********_*********__***_*******_******_***_*******
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