# STOCKHOLM 1.0
#=GF ID 2.30.42.10/FF/23581
#=GF DE ZOO-1, isoform e
#=GF AC 2.30.42.10/FF/23581
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 50.887
#=GS A0A1I7USX2/700-809  AC A0A1I7USX2
#=GS A0A1I7USX2/700-809  OS Caenorhabditis tropicalis
#=GS A0A1I7USX2/700-809  DE DNA-directed RNA polymerase
#=GS A0A1I7USX2/700-809  DR GENE3D; 3e47912140b1ed1bbe8450bd2d583d0c/700-809; 
#=GS A0A1I7USX2/700-809  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A1I7USX2/700-809  DR EC; 2.7.7.6; 
#=GS H1UBK8/308-416      AC H1UBK8
#=GS H1UBK8/308-416      OS Caenorhabditis elegans
#=GS H1UBK8/308-416      DE ZO-1 (Zonula Occludens tight junctional protein) Ortholog
#=GS H1UBK8/308-416      DR GENE3D; 2bbab615cf5b5a7e892552dec2aafb43/308-416; 
#=GS H1UBK8/308-416      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H1UBK8/308-416      DR GO; GO:0005913; GO:0005923; GO:0007015; GO:0009792; GO:0048598; 
#=GS H1UBL0/184-292      AC H1UBL0
#=GS H1UBL0/184-292      OS Caenorhabditis elegans
#=GS H1UBL0/184-292      DE ZO-1 (Zonula Occludens tight junctional protein) Ortholog
#=GS H1UBL0/184-292      DR GENE3D; 6ccb4f417c5d17ad21b0ebe98c4a0369/184-292; 
#=GS H1UBL0/184-292      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H1UBL0/184-292      DR GO; GO:0005913; GO:0005923; GO:0007015; GO:0009792; GO:0048598; 
#=GS H1UBK9/276-384      AC H1UBK9
#=GS H1UBK9/276-384      OS Caenorhabditis elegans
#=GS H1UBK9/276-384      DE ZO-1 (Zonula Occludens tight junctional protein) Ortholog
#=GS H1UBK9/276-384      DR GENE3D; 88cd04d811f9ed51097d83ace0d05198/276-384; 
#=GS H1UBK9/276-384      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H1UBK9/276-384      DR GO; GO:0005913; GO:0005923; GO:0007015; GO:0009792; GO:0048598; 
#=GS Q8I103/337-425      AC Q8I103
#=GS Q8I103/337-425      OS Caenorhabditis elegans
#=GS Q8I103/337-425      DE ZO-1 (Zonula Occludens tight junctional protein) Ortholog
#=GS Q8I103/337-425      DR GENE3D; 92d901f555eeaa71eb65dce1116084b4/337-425; 
#=GS Q8I103/337-425      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q8I103/337-425      DR GO; GO:0005913; GO:0005923; GO:0007015; GO:0009792; GO:0048598; 
#=GS Q56VX4/337-425      AC Q56VX4
#=GS Q56VX4/337-425      OS Caenorhabditis elegans
#=GS Q56VX4/337-425      DE ZO-1 (Zonula Occludens tight junctional protein) Ortholog
#=GS Q56VX4/337-425      DR GENE3D; d27aa8bf2eaf042b918c3345432b94db/337-425; 
#=GS Q56VX4/337-425      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q56VX4/337-425      DR GO; GO:0005913; GO:0005923; GO:0007015; GO:0009792; GO:0048598; 
#=GS A0A1I7USX3/700-809  AC A0A1I7USX3
#=GS A0A1I7USX3/700-809  OS Caenorhabditis tropicalis
#=GS A0A1I7USX3/700-809  DE DNA-directed RNA polymerase
#=GS A0A1I7USX3/700-809  DR GENE3D; 4c68a3eb099e435a12c7ed66eb361b91/700-809; 
#=GS A0A1I7USX3/700-809  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A1I7USX3/700-809  DR EC; 2.7.7.6; 
#=GS H2W630/177-290      AC H2W630
#=GS H2W630/177-290      OS Caenorhabditis japonica
#=GS H2W630/177-290      DE Uncharacterized protein
#=GS H2W630/177-290      DR GENE3D; 00046e7dee75a0021fb8af88aebb74ef/177-290; 
#=GS H2W630/177-290      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A016UKF3/341-452  AC A0A016UKF3
#=GS A0A016UKF3/341-452  OS Ancylostoma ceylanicum
#=GS A0A016UKF3/341-452  DE Uncharacterized protein
#=GS A0A016UKF3/341-452  DR GENE3D; 2514ae1243235314fe8ca548be82ae9d/341-452; 
#=GS A0A016UKF3/341-452  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; 
#=GS A8XWB2/335-437      AC A8XWB2
#=GS A8XWB2/335-437      OS Caenorhabditis briggsae
#=GS A8XWB2/335-437      DE Protein CBR-ZOO-1
#=GS A8XWB2/335-437      DR GENE3D; 46f80db1d51cdc89cb895c443d84de26/335-437; 
#=GS A8XWB2/335-437      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS E3N1N6/320-428      AC E3N1N6
#=GS E3N1N6/320-428      OS Caenorhabditis remanei
#=GS E3N1N6/320-428      DE CRE-ZOO-1 protein
#=GS E3N1N6/320-428      DR GENE3D; 67a9894a3b34ba91cbe0716e07c43e10/320-428; 
#=GS E3N1N6/320-428      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS G0MJI5/288-399      AC G0MJI5
#=GS G0MJI5/288-399      OS Caenorhabditis brenneri
#=GS G0MJI5/288-399      DE CBN-ZOO-1 protein
#=GS G0MJI5/288-399      DR GENE3D; 72ba56eb5ec43bd07e11feea90aca524/288-399; 
#=GS G0MJI5/288-399      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A1I7XGY9/173-283  AC A0A1I7XGY9
#=GS A0A1I7XGY9/173-283  OS Heterorhabditis bacteriophora
#=GS A0A1I7XGY9/173-283  DE Uncharacterized protein
#=GS A0A1I7XGY9/173-283  DR GENE3D; ca8411969733bc1258a0441e3a008c38/173-283; 
#=GS A0A1I7XGY9/173-283  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Heterorhabditidae; Heterorhabditis; Heterorhabditis bacteriophora; 
#=GS W6NCY4/311-421      AC W6NCY4
#=GS W6NCY4/311-421      OS Haemonchus contortus
#=GS W6NCY4/311-421      DE PDZ and ZU5 domain containing protein
#=GS W6NCY4/311-421      DR GENE3D; cb64d4f1a29f350c595dbfad51b32e48/311-421; 
#=GS W6NCY4/311-421      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus; Haemonchus contortus; 
#=GS A0A0B1TFR1/18-129   AC A0A0B1TFR1
#=GS A0A0B1TFR1/18-129   OS Oesophagostomum dentatum
#=GS A0A0B1TFR1/18-129   DE PDZ/DHR/GLGF domain protein
#=GS A0A0B1TFR1/18-129   DR GENE3D; d52a7cb996f3590545bf2d44ce394de5/18-129; 
#=GS A0A0B1TFR1/18-129   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Strongyloidea; Cloacinidae; Oesophagostomum; Oesophagostomum dentatum; 
#=GS A0A016UJX3/307-418  AC A0A016UJX3
#=GS A0A016UJX3/307-418  OS Ancylostoma ceylanicum
#=GS A0A016UJX3/307-418  DE Uncharacterized protein
#=GS A0A016UJX3/307-418  DR GENE3D; e1d778cc61554e622ff2a1be297e575a/307-418; 
#=GS A0A016UJX3/307-418  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; 
#=GF TC 189.7 5.5E-60
#=GF SQ 16
A0A1I7USX2/700-809          --YDCYTRQPSRSIDGNGVANIVFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRSMRGITRESAVQLLLGLDDRVQLKLEHARQDYDHVRANQLG--
H1UBK8/308-416              ---DCYTRQPSRSIDANGVANIMFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLRLEHARQDFEHVRANQLG--
H1UBL0/184-292              ---DCYTRQPSRSIDANGVANIMFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLRLEHARQDFEHVRANQLG--
H1UBK9/276-384              ---DCYTRQPSRSIDANGVANIMFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLRLEHARQDFEHVRANQLG--
Q8I103/337-425              ---------------GGG--------VGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLRLEHARQDFEHVRANQLG--
Q56VX4/337-425              ---------------GGG--------VGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLRLEHARQDFEHVRANQLG--
A0A1I7USX3/700-809          --YDCYTRQPSRSIDGNGVANIVFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRSMRGITRESAVQLLLGLDDRVQLKLEHARQDYDHVRANQLG--
H2W630/177-290              QEYDCNMRQPSRSIDANGVANVMFRKIGGSVGVRVIGGNEVGIFVSAVAADSPAAIHGVNCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLKLEHARNEFEHVRSNQLGDN
A0A016UKF3/341-452          -EYEYYSRQKPKP-DQNGVRTVTFRKVGGSVGIRVIGGNEVGIFVSAVAADSPAALHGVCCGDRIVEVNGRPMRGVTRESAVQLLLALDDHVSLRLEHARQDFEHVRNSQLGDN
A8XWB2/335-437              ENYIEIEKI---------IKGFIVLQVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLKLEHARQDFEHVRTNQLG--
E3N1N6/320-428              ---DCYTRQPSRSIDANGVANIMFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLKLEHARQDFEHVRANQLG--
G0MJI5/288-399              QEYDCYTRQPSRSIDANGVANVMFRKVGGSVGVRVIGGNEVGIFVSAVAADSPASLHGVSCGDRILEVNGRNMRGVTRESAVQLLLGLDDRVSLKLEHAKADYDHVRANQLG--
A0A1I7XGY9/173-283          GEYEYYNRQQPKP-EQNGLRAVTFRKVGGSVGVRVIGGNEVGIFVSAVAADSPAALHGVCCGDRIVEVNSRQMRGVSRESAVQLLLALDDRVTLRLEHARQEFEHVRNNQMG--
W6NCY4/311-421              -EYEYYSRQKPKP-DQNGVRTVTFRKVGGSVGIRVIGGNEVGIFVSAVAADSPAALHGVCCGDRIVEVNGRSMRGVTRESAVQLLLALDDHVSLRLEHARQDFEHVRNSQLGD-
A0A0B1TFR1/18-129           -EYEYYSRQKPKP-DQNGVRTVTFRKVGGSVGIRGIGGNEVGIFVSAVAADSPAALHGVCCGDRIVEVNGRPMRGVTRESAVQLLLALDDHVSLRLEHARQDFEHVRNSQLGDN
A0A016UJX3/307-418          -EYEYYSRQKPKP-DQNGVRTVTFRKVGGSVGIRVIGGNEVGIFVSAVAADSPAALHGVCCGDRIVEVNGRPMRGVTRESAVQLLLALDDHVSLRLEHARQDFEHVRNSQLGDN
#=GC scorecons              013334254233314357433435458999997989999999999999999999689995999996999895999889999999996999797979999878879995698900
#=GC scorecons_70           _________________*________****************************_****_***********_***********************************_****__
#=GC scorecons_80           _________________*________****************************_****_*****_*****_**************_***_*_**************__***__
#=GC scorecons_90           __________________________******_*_*******************_****_*****_*****_**************_***_*_*_*****_**_***__***__
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