# STOCKHOLM 1.0 #=GF ID 2.30.30.10/FF/174 #=GF DE Gag and reverse transcriptase polyprotein #=GF AC 2.30.30.10/FF/174 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 6.778 #=GS 1c0mA02/168-221 AC P03354 #=GS 1c0mA02/168-221 OS Rous sarcoma virus - Prague C #=GS 1c0mA02/168-221 DE Gag-Pro-Pol polyprotein #=GS 1c0mA02/168-221 DR CATH; 1c0m; A:216-269; #=GS 1c0mA02/168-221 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 1c0mA02/168-221 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS O39643/788-842 AC O39643 #=GS O39643/788-842 OS Rous-associated virus type 2 #=GS O39643/788-842 DE Reverse transcriptase #=GS O39643/788-842 DR GENE3D; 25a35b3fe75e46d9d5c4a95e39f1ee67/788-842; #=GS O39643/788-842 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; #=GS O39643/788-842 DR EC; 2.7.7.49; #=GS 1c0mB02/168-221 AC P03354 #=GS 1c0mB02/168-221 OS Rous sarcoma virus - Prague C #=GS 1c0mB02/168-221 DE Gag-Pro-Pol polyprotein #=GS 1c0mB02/168-221 DR CATH; 1c0m; B:216-269; #=GS 1c0mB02/168-221 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 1c0mB02/168-221 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 1c0mC02/168-221 AC P03354 #=GS 1c0mC02/168-221 OS Rous sarcoma virus - Prague C #=GS 1c0mC02/168-221 DE Gag-Pro-Pol polyprotein #=GS 1c0mC02/168-221 DR CATH; 1c0m; C:216-269; #=GS 1c0mC02/168-221 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 1c0mC02/168-221 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 1c0mD02/168-221 AC P03354 #=GS 1c0mD02/168-221 OS Rous sarcoma virus - Prague C #=GS 1c0mD02/168-221 DE Gag-Pro-Pol polyprotein #=GS 1c0mD02/168-221 DR CATH; 1c0m; D:216-269; #=GS 1c0mD02/168-221 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 1c0mD02/168-221 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 1c1aA02/168-221 AC P03354 #=GS 1c1aA02/168-221 OS Rous sarcoma virus - Prague C #=GS 1c1aA02/168-221 DE Gag-Pro-Pol polyprotein #=GS 1c1aA02/168-221 DR CATH; 1c1a; A:216-269; #=GS 1c1aA02/168-221 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 1c1aA02/168-221 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 1c1aB02/168-220 AC P03354 #=GS 1c1aB02/168-220 OS Rous sarcoma virus - Prague C #=GS 1c1aB02/168-220 DE Gag-Pro-Pol polyprotein #=GS 1c1aB02/168-220 DR CATH; 1c1a; B:216-268; #=GS 1c1aB02/168-220 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 1c1aB02/168-220 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 4fw1A02/168-222 AC P03354 #=GS 4fw1A02/168-222 OS Rous sarcoma virus - Prague C #=GS 4fw1A02/168-222 DE Gag-Pro-Pol polyprotein #=GS 4fw1A02/168-222 DR CATH; 4fw1; A:216-269; #=GS 4fw1A02/168-222 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 4fw1A02/168-222 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 4fw1B02/168-222 AC P03354 #=GS 4fw1B02/168-222 OS Rous sarcoma virus - Prague C #=GS 4fw1B02/168-222 DE Gag-Pro-Pol polyprotein #=GS 4fw1B02/168-222 DR CATH; 4fw1; B:216-269; #=GS 4fw1B02/168-222 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 4fw1B02/168-222 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 4fw2A02/216-270 AC P03354 #=GS 4fw2A02/216-270 OS Rous sarcoma virus - Prague C #=GS 4fw2A02/216-270 DE Gag-Pro-Pol polyprotein #=GS 4fw2A02/216-270 DR CATH; 4fw2; A:216-269; #=GS 4fw2A02/216-270 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 4fw2A02/216-270 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 4fw2B02/216-270 AC P03354 #=GS 4fw2B02/216-270 OS Rous sarcoma virus - Prague C #=GS 4fw2B02/216-270 DE Gag-Pro-Pol polyprotein #=GS 4fw2B02/216-270 DR CATH; 4fw2; B:216-268; #=GS 4fw2B02/216-270 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS 4fw2B02/216-270 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q04095/1496-1550 AC Q04095 #=GS Q04095/1496-1550 OS Rous sarcoma virus (strain Schmidt-Ruppin A) #=GS Q04095/1496-1550 DE Gag-Pro-Pol polyprotein #=GS Q04095/1496-1550 DR GENE3D; 08a95ff0af5ea705e30d3c3ea0f0b939/1496-1550; #=GS Q04095/1496-1550 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS Q04095/1496-1550 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS O92956/1496-1550 AC O92956 #=GS O92956/1496-1550 OS Rous sarcoma virus - Schmidt-Ruppin B #=GS O92956/1496-1550 DE Gag-Pro-Pol polyprotein #=GS O92956/1496-1550 DR GENE3D; 37e0dffd15fdd823a62a7ad9972c557f/1496-1550; #=GS O92956/1496-1550 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS O92956/1496-1550 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q7SQ98/788-842 AC Q7SQ98 #=GS Q7SQ98/788-842 OS Avian leukosis virus #=GS Q7SQ98/788-842 DE Pol polyprotein #=GS Q7SQ98/788-842 DR GENE3D; 474e106fec8ea474a5d1f8b4a57cb3c1/788-842; #=GS Q7SQ98/788-842 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; #=GS Q7SQ98/788-842 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P03354/1496-1550 AC P03354 #=GS P03354/1496-1550 OS Rous sarcoma virus - Prague C #=GS P03354/1496-1550 DE Gag-Pro-Pol polyprotein #=GS P03354/1496-1550 DR GENE3D; f36623226a6306d750289dede37689a2/1496-1550; #=GS P03354/1496-1550 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS P03354/1496-1550 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS B8X346/788-842 AC B8X346 #=GS B8X346/788-842 OS Rous sarcoma virus #=GS B8X346/788-842 DE Reverse transcriptase #=GS B8X346/788-842 DR GENE3D; 916536de741db2d16de21df9fbe79b60/788-842; #=GS B8X346/788-842 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS B8X346/788-842 DR EC; 2.7.7.49; #=GS Q98WV8/937-991 AC Q98WV8 #=GS Q98WV8/937-991 OS Avian leukosis virus #=GS Q98WV8/937-991 DE Gag polyprotein #=GS Q98WV8/937-991 DR GENE3D; 05e88d866f348cc96f032545a56c456d/937-991; #=GS Q98WV8/937-991 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; #=GS G3FBH7/217-271 AC G3FBH7 #=GS G3FBH7/217-271 OS Rous-associated virus type 1 #=GS G3FBH7/217-271 DE Integrase #=GS G3FBH7/217-271 DR GENE3D; 10fffdc3715b358ad4668a8bead60a84/217-271; #=GS G3FBH7/217-271 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; #=GS A0A088G0Q9/74-128 AC A0A088G0Q9 #=GS A0A088G0Q9/74-128 OS Avian leukosis virus #=GS A0A088G0Q9/74-128 DE Polymerase polyprotein #=GS A0A088G0Q9/74-128 DR GENE3D; 3361d412f21ce9220db18662dbd21174/74-128; #=GS A0A088G0Q9/74-128 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; #=GS A0A075DWD5/285-339 AC A0A075DWD5 #=GS A0A075DWD5/285-339 OS Tasmanian devil retrovirus #=GS A0A075DWD5/285-339 DE Polymerase #=GS A0A075DWD5/285-339 DR GENE3D; 5721aa24c9634080d0b8fc19ce6889cf/285-339; #=GS A0A075DWD5/285-339 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Tasmanian devil retrovirus; #=GF TC 140.7 4.6E-45 #=GF SQ 20 1c0mA02/168-221 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDI- O39643/788-842 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT 1c0mB02/168-221 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDI- 1c0mC02/168-221 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDI- 1c0mD02/168-221 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDI- 1c1aA02/168-221 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDI- 1c1aB02/168-220 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPD-- 4fw1A02/168-222 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT 4fw1B02/168-222 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT 4fw2A02/216-270 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT 4fw2B02/216-270 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT Q04095/1496-1550 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDVT O92956/1496-1550 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT Q7SQ98/788-842 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT P03354/1496-1550 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT B8X346/788-842 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIA Q98WV8/937-991 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT G3FBH7/217-271 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT A0A088G0Q9/74-128 TVLTEGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT A0A075DWD5/285-339 TVLTERPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT #=GC scorecons 9999989999999999999999999999999999999999999999999999962 #=GC scorecons_70 ******************************************************_ #=GC scorecons_80 *****************************************************__ #=GC scorecons_90 *****_***********************************************__ //