# STOCKHOLM 1.0 #=GF ID 2.130.10.10/FF/47416 #=GF DE WD domain, G-beta repeat protein #=GF AC 2.130.10.10/FF/47416 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 59.223 #=GS Q93758/34-387 AC Q93758 #=GS Q93758/34-387 OS Caenorhabditis elegans #=GS Q93758/34-387 DE Seven WD repeats, AN11 family #=GS Q93758/34-387 DR GENE3D; 9e1d3e1552507d30f327e463e532961f/34-387; #=GS Q93758/34-387 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q93758/34-387 DR GO; GO:0005515; GO:0005737; GO:0006970; GO:0009408; GO:0030274; GO:0030336; GO:0030516; GO:0043087; GO:0048365; GO:0060101; #=GS U6PSG3/41-407 AC U6PSG3 #=GS U6PSG3/41-407 OS Haemonchus contortus #=GS U6PSG3/41-407 DE WD40 repeat domain containing protein #=GS U6PSG3/41-407 DR GENE3D; 288f550d9513be761385ea2fa95e39fb/41-407; #=GS U6PSG3/41-407 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus; Haemonchus contortus; #=GS A0A0N4XCR0/97-455 AC A0A0N4XCR0 #=GS A0A0N4XCR0/97-455 OS Nippostrongylus brasiliensis #=GS A0A0N4XCR0/97-455 DE Uncharacterized protein #=GS A0A0N4XCR0/97-455 DR GENE3D; 4d8ebbfe366f35b61eed84568ed38607/97-455; #=GS A0A0N4XCR0/97-455 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Heligmonellidae; Nippostrongylinae; Nippostrongylus; Nippostrongylus brasiliensis; #=GS K7HFF7/3-159 AC K7HFF7 #=GS K7HFF7/3-159 OS Caenorhabditis japonica #=GS K7HFF7/3-159 DE Uncharacterized protein #=GS K7HFF7/3-159 DR GENE3D; 5d29a868c2191b2bf5fbb07e67a8b9f7/3-159; #=GS K7HFF7/3-159 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A0A016SQ03/1-149 AC A0A016SQ03 #=GS A0A016SQ03/1-149 OS Ancylostoma ceylanicum #=GS A0A016SQ03/1-149 DE Uncharacterized protein #=GS A0A016SQ03/1-149 DR GENE3D; 6ab967c966b3314bebb351c1d14a0668/1-149; #=GS A0A016SQ03/1-149 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A0D6LX31/7-380 AC A0A0D6LX31 #=GS A0A0D6LX31/7-380 OS Ancylostoma ceylanicum #=GS A0A0D6LX31/7-380 DE WD domain, G-beta repeat protein #=GS A0A0D6LX31/7-380 DR GENE3D; 78bc65666aae74cf37d9f6b7fac85c26/7-380; #=GS A0A0D6LX31/7-380 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A1I7U273/30-324 AC A0A1I7U273 #=GS A0A1I7U273/30-324 OS Caenorhabditis tropicalis #=GS A0A1I7U273/30-324 DE Uncharacterized protein #=GS A0A1I7U273/30-324 DR GENE3D; 7f868f6b5069162f6a22518184f950e6/30-324; #=GS A0A1I7U273/30-324 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A0K0DDN0/11-342 AC A0A0K0DDN0 #=GS A0A0K0DDN0/11-342 OS Angiostrongylus cantonensis #=GS A0A0K0DDN0/11-342 DE Uncharacterized protein #=GS A0A0K0DDN0/11-342 DR GENE3D; 810d41fc4662e5789fb1605090f30248/11-342; #=GS A0A0K0DDN0/11-342 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus cantonensis; #=GS G0MRS0/10-305 AC G0MRS0 #=GS G0MRS0/10-305 OS Caenorhabditis brenneri #=GS G0MRS0/10-305 DE CBN-SWAN-1 protein #=GS G0MRS0/10-305 DR GENE3D; 8791d98483d8d80f6606987f104547f0/10-305; #=GS G0MRS0/10-305 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A8XCX1/23-385 AC A8XCX1 #=GS A8XCX1/23-385 OS Caenorhabditis briggsae #=GS A8XCX1/23-385 DE Protein CBR-SWAN-1 #=GS A8XCX1/23-385 DR GENE3D; 8dfcf76ea412069f8d589f7dd6eaf9bd/23-385; #=GS A8XCX1/23-385 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A0B1TGE6/88-441 AC A0A0B1TGE6 #=GS A0A0B1TGE6/88-441 OS Oesophagostomum dentatum #=GS A0A0B1TGE6/88-441 DE WD domain, G-beta repeat protein #=GS A0A0B1TGE6/88-441 DR GENE3D; ada13fbf6f9978ca38545d8254065eab/88-441; #=GS A0A0B1TGE6/88-441 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Strongyloidea; Cloacinidae; Oesophagostomum; Oesophagostomum dentatum; #=GS E3M0E9/59-380 AC E3M0E9 #=GS E3M0E9/59-380 OS Caenorhabditis remanei #=GS E3M0E9/59-380 DE CRE-SWAN-1 protein #=GS E3M0E9/59-380 DR GENE3D; dbdde3dd9e94138a59c9e30d24886901/59-380; #=GS E3M0E9/59-380 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A0R3PTX9/12-333 AC A0A0R3PTX9 #=GS A0A0R3PTX9/12-333 OS Angiostrongylus costaricensis #=GS A0A0R3PTX9/12-333 DE Uncharacterized protein #=GS A0A0R3PTX9/12-333 DR GENE3D; ecb92990ae587c78203a534207e5cea0/12-333; #=GS A0A0R3PTX9/12-333 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus costaricensis; #=GF TC 372.2 4.6E-115 #=GF SQ 13 Q93758/34-387 ---------------------------------------------------------------GRQNEI---------VIGGRD-RRCEIY-------------------KFTSDQQLYASAWSNKNDIKFRLAVGTVSDVSVNPCAANK----------------------------------VSIVQLKDETGELVETASFPMEFPANAVGFIPDPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMIN------NTNSQYGSALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKTQLIAHDKPVHDIEFAKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPNKEKLQRLSWNKQEPYFMALFAENSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPHSPHHICTAGDDSQALIWDLQQVPRPVDDPILAYSAGGEVNQIHWGPVHSNWIAICFNKTLEILR- U6PSG3/41-407 ---------------------------------------------------------TVTVAQTSQAQTSNPSVPQTNSIAHRDTRRSEIY-------------------RYSGPKPLFAAAWANKNDRRFRLAVGSI----VEREQGNN----------------------------------VTLIELDEALGSLVERGSFGHEFPPNQIGFIPDLENRYPDLLATSADFLRLWRI-----HSNNSVTEEAILSSNKSSQFTAPLTNFDWNEVEPRLIGTSSIDTTCTIYDVEAQQAVGLIRPIS-FSVKTQLIAHDKPVHDIAFSRIFNGKDNFATVGADGSARMFDLRHLEHSTIVYEDPIKLPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMPRPVEDPILAYSAGGEVNQVHWGPAHNNWICICFNKSLEILRV A0A0N4XCR0/97-455 ------------------------------------------------------------------------------------AEQVSLAAPSVMVNILPSTVTNYSNLSYSGPKPLFAAAWANKNDRRFRLAVGSI----VEREQGNN----------------------------------VTLIELDETLGSLVERGSFAHEFPPNQIGFIPDLENRYPDLIATSADFLRLWRI-----HPNNLVTEEAVLSSNKSSQFTAPLTNFDWNEVEPRLIGTSSIDTTCTIYDVEAQQAVGLIRPIS-FSVKTQLIAHDKPVHDIAFSRIFNGKDNFATVGADGSARMFDLRHLEHSTIVYEDPMKQPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMPRPVEDPILAYSAGGEVNQVHWGPAHNNWICICFNKSLEILRE K7HFF7/3-159 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQNRANLASLCADGSARMFDLRHLNHSTIVYEDPNKEKLQRLSWNKQEHYFLALFAENSQEVQILDIRMPCSILCRLKNHNGPVNGIAWAPHSPHHICTAGDDSQALIWDLQHAPRPVEDPILAYTAGGEVNQIHWGPVHSNWIAICFNKTLEILRV A0A016SQ03/1-149 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTGADGSARMFDLRHLEHSTIVYEDPLKLPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMPRPVEDPILAYSAGGEVNQVHWGPAHNNWICICFNKSLEILRV A0A0D6LX31/7-380 RLRCSVQRSGQHAECASMSSVAVVNGQPRDPSSATPKENSQTPGPPPPVPPPNQTGATVSQSQSSQSQIGS-SAPQPNSAPQRDSRRSEIYSAIAFVNICVIIGCDATPTRYSGPKPLFAAAWANKNDRRFRLAVGSI----VEREQGNN-----------------------------------------------------------------------------------------------------------NKSSQFTAPLTNFDWNEVDPRLIGTSSIDTTCTIYDIEAQQAVGLIRPIT-FSVKTQLIAHDKPVHDIAFSRIFNGKDNFATVGADGSARMFDLRHLEHSTIVYEDPLKLPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMPRPVEDPILAYSAGGEVNQVHWGPAHNNWICICFNKSLEILRV A0A1I7U273/30-324 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLRDDIGELVETTSFPLDFPANAVGFIPDTENIYPDLLATTSDCLRLWRIVDGKAQPDSVMHNVA---NMQNSQFGSALTSFDWNEVEPRFIGVSSVDTTCTIYDVEVGAAIGTTKPTAPFTVKTQLIAHDKPVHDIEFSKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPQKEKLQRLSWNKQEHYFLALFAENSQEVQILDIRMPCNILCRLRNHNGPVNGIAWAPHSPHHICTAGDDSQALIWDLQHAPRPVEDPILAYTAGGEVNQIHWGPVHSNWIAICFNKTLEILR- A0A0K0DDN0/11-342 -----------------------------------------------------------------------------------------------------------SFLRYSGPKTLFAAAWANKSDRRFRLAVGSI----VEREQGNN----------------------------------VTLIELDETLGSLVERGSFNHEFPPNQIGFIPDLENRYPDLIATSADFLRLWRI-----HPNNLVTEEA----NKSSQFTAPLTNFDWNEVEPRLIGTSSIDTTCTIYDVEAQQTVGLIRPIT-FSVKTQLIAHDKPVHDIAFSRIFNGKDNFATVGADGSARMFDLRHLEHSTIVYEDPLKLPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMPRPVEDPILAYSAGGEVNQVHWGPAHNNWICICFNKSLEILRE G0MRS0/10-305 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLKDDTGELVETTSFPLEFPANAVAFIPDSENTYPDLLATTSDCLRLWRIVDGKAQADTVMHNVS---SMQNSQYGSALTSFDWNEVEPRYIGVSSIDTTCTIYDVEVGAAIGTTRPTAPFSVKTQLIAHDKPVHDIEFSKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPNKERLQRLSWNKQEHYFLALFAENSQEVQILDIRMPCNILCRLRNHTAPVNGIAWAPHSPHHICTAADDSQALIWDLQHAPRPIEDPILAYSAGGEVNQIHWGPVHSNWIAICFNKTLEILRV A8XCX1/23-385 -----------------------------------------------------QQG-----IQRANNDI---------VIGARD-RRCEIY-------------------KFNSDQALYASAWSNKNDIKFRLAVSTVSDISANPKAPNK----------------------------------VSVVQLKDETGELVETTSFPMEFPANAVGFIPDLDGVFPDLLATTSDCLRLWRIVDGQAQPDAVMHNVS--GTPSNTPYGSPLTSFDWNEVEPRYIGVASVDTTCTIYDVEVGAPIATTRALTPYNVKTQLIAHDKPVHDIEFSKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPQKEKLQRLSWNKQEHYFMALFAEHSQEVMILDIRMPCSILCRLRNHNGPVNGIAWAPHSPHHICTAGDDSQALIWDLQHAPRPVEDPILAYTAGGEVNQIHWGPVHSNWIAICFNKTLEILR- A0A0B1TGE6/88-441 ---------------------------------------------------------------------------------------------------------------------------ANKNDRRFRLAVGSI----VEREQGNNVTLIELDETLGSLVERGSFSHEFPANQIGFIPDLVTLIELDETLGSLVERGSFSHEFPANQIGFIPDLENKYPDLLATSADALHLWRI-----HPNNLVTEVAVLSSNKSSQFTAPLTNFDWNEVDPRLIGTSSIDTTCTIYDIEAQQAIGLAHPFS-FSVKTQLIAHDKPVHDIAFSRIFNGKDNFATVGADGSARMFDLRHLEHSTIVYEDPQKLPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMGRPVEDPILAYSAGGEVNQVHWGPAHHNWICICFNKSLEILRV E3M0E9/59-380 ----------------------------------------------------------------------------------------------------------------------------NKNDIKFRLAVGTITDVGANPRAANK----------------------------------VSIVQLKDDTGELVETTSFPMEFPANAVGFIPDLENAYPDLLATTSDCLRLWRIVDGKAQADTVMHN------LTNAQYGSALTSFDWNEVEPRYIGVASVDTTCTIYDIEVGAAIGATRPTAPFTVKTQLIAHDRPVHDIEFSKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPGKEKLQRLSWNKQEHYFLALFAENSQEVQILDIRMPCSILCRLRNHNGPVNGIAWAPHSPHHICTAGDDSQALIWDLQHAPRPVEDPILAYSAGGEVNQIHWGPVHSNWIAICFNKTLEILR- A0A0R3PTX9/12-333 ---------------------------------------------------------------------------------------------------------------------LFAAAWANKSDRRFRLAVGSI----VEREQGNN----------------------------------VTLIELDETLGSLVERGSFNHEFPPNQIGFIPDLENRYPDLIATSADFLRLWRI-----HPNNLVTEEA----NKSSQFTAPLTNFDWNEVEPRLIGTSSIDTTCTIYDIEAQQAVGLIRPIA-FSVKTQLIAHDKPVHDIAFSRIFNGKDNFATVGADGSARMFDLRHLEHSTIVYEDPLKLPLMRVAWNKQEHYHLATFAQDSTEVIIIDIRMPCSPLARLKNHNGAVNGLAWAPHSAHHICTASDDAQALIWDLQNMPRPVEDPILAYSAGGEVNQVHWGPAHNNWICICFNKSLEILRE #=GC scorecons 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010102121222332312333333220000222222320000000000000000000000000000000000211123231232333223311333232333333233133332332232333333000002222222211000022344433355355555445535534545555555545332444234423043455555555455555354453355546666799999999999996999999999394495966999998957959965959949699999975959979978699969999996999999599699999999558998899999969999999799996959995999996999992 #=GC scorecons_70 _________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________*****************_*********_*__*_**_*******_**_***_*_**_*********_*_*******_**********_******_**_********__************************_*_***_*****_*****_ #=GC scorecons_80 ____________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________**************_*********_*__*_*__*******_**_**__*_**_*_******__*_*******_***_******_******_**_********__***********_*******_****_*_***_*****_*****_ #=GC scorecons_90 _____________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________*************_*********_*__*_*__*******__*_**__*_**_*_******__*_**_**_*_***_******_******_**_********___**********_*******_****_*_***_*****_*****_ //