# STOCKHOLM 1.0
#=GF ID 2.130.10.10/FF/103238
#=GF DE Uncharacterized WD repeat-containing protein C343.04c
#=GF AC 2.130.10.10/FF/103238
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 41.405
#=GS Q9FNN2/256-522      AC Q9FNN2
#=GS Q9FNN2/256-522      OS Arabidopsis thaliana
#=GS Q9FNN2/256-522      DE WD-repeat protein-like
#=GS Q9FNN2/256-522      DR GENE3D; e571fbc614e44ef2f1104f8a9ff44c34/256-522; 
#=GS Q9FNN2/256-522      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FNN2/256-522      DR GO; GO:0006970; GO:0009416; GO:0009723; GO:0009733; GO:0009737; 
#=GS A0A178U8E6/1-258    AC A0A178U8E6
#=GS A0A178U8E6/1-258    OS Arabidopsis thaliana
#=GS A0A178U8E6/1-258    DE Uncharacterized protein
#=GS A0A178U8E6/1-258    DR GENE3D; 63a730d1b4d0997f93c8dec916e5898a/1-258; 
#=GS A0A178U8E6/1-258    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A0D3B0B6/256-523  AC A0A0D3B0B6
#=GS A0A0D3B0B6/256-523  OS Brassica oleracea var. oleracea
#=GS A0A0D3B0B6/256-523  DE Uncharacterized protein
#=GS A0A0D3B0B6/256-523  DR GENE3D; 1a424c111c241d01be984089fb6e3e1e/256-523; 
#=GS A0A0D3B0B6/256-523  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS D7M1F6/255-522      AC D7M1F6
#=GS D7M1F6/255-522      OS Arabidopsis lyrata subsp. lyrata
#=GS D7M1F6/255-522      DE Transducin family protein
#=GS D7M1F6/255-522      DR GENE3D; 1b6006b9e11af65018bd1b68e750447d/255-522; 
#=GS D7M1F6/255-522      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS M4CP66/39-306       AC M4CP66
#=GS M4CP66/39-306       OS Brassica rapa subsp. pekinensis
#=GS M4CP66/39-306       DE Uncharacterized protein
#=GS M4CP66/39-306       DR GENE3D; 288412781aa9ad87228a42f7522f3967/39-306; 
#=GS M4CP66/39-306       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS R0FDK4/255-522      AC R0FDK4
#=GS R0FDK4/255-522      OS Capsella rubella
#=GS R0FDK4/255-522      DE Uncharacterized protein
#=GS R0FDK4/255-522      DR GENE3D; 56af33bd6aa0ad2885b5b63e3d76cb7b/255-522; 
#=GS R0FDK4/255-522      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS A0A078G529/246-513  AC A0A078G529
#=GS A0A078G529/246-513  OS Brassica napus
#=GS A0A078G529/246-513  DE BnaC09g47420D protein
#=GS A0A078G529/246-513  DR GENE3D; 708122a2add970cb6386866ba559cdfd/246-513; 
#=GS A0A078G529/246-513  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D3EGT9/246-512  AC A0A0D3EGT9
#=GS A0A0D3EGT9/246-512  OS Brassica oleracea var. oleracea
#=GS A0A0D3EGT9/246-512  DE Uncharacterized protein
#=GS A0A0D3EGT9/246-512  DR GENE3D; 7d587002c43c6e11b817c553ac61c820/246-512; 
#=GS A0A0D3EGT9/246-512  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A078CT71/257-524  AC A0A078CT71
#=GS A0A078CT71/257-524  OS Brassica napus
#=GS A0A078CT71/257-524  DE BnaA03g02550D protein
#=GS A0A078CT71/257-524  DR GENE3D; 7eb04efa0b04b313273006f89861ebf9/257-524; 
#=GS A0A078CT71/257-524  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078D1A5/257-524  AC A0A078D1A5
#=GS A0A078D1A5/257-524  OS Brassica napus
#=GS A0A078D1A5/257-524  DE BnaC03g03670D protein
#=GS A0A078D1A5/257-524  DR GENE3D; 9e301c8daddb063a23095fda9e2c389e/257-524; 
#=GS A0A078D1A5/257-524  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078C175/248-518  AC A0A078C175
#=GS A0A078C175/248-518  OS Brassica napus
#=GS A0A078C175/248-518  DE BnaA10g22880D protein
#=GS A0A078C175/248-518  DR GENE3D; aa23ad95512b7afb48a7e60fce08b4d9/248-518; 
#=GS A0A078C175/248-518  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS M4CYQ4/248-518      AC M4CYQ4
#=GS M4CYQ4/248-518      OS Brassica rapa subsp. pekinensis
#=GS M4CYQ4/248-518      DE Uncharacterized protein
#=GS M4CYQ4/248-518      DR GENE3D; aa23ad95512b7afb48a7e60fce08b4d9/248-518; 
#=GS M4CYQ4/248-518      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS V4LLV9/255-528      AC V4LLV9
#=GS V4LLV9/255-528      OS Eutrema salsugineum
#=GS V4LLV9/255-528      DE Uncharacterized protein
#=GS V4LLV9/255-528      DR GENE3D; bec0e9b7504c6291d1fdff9fbe4ceb93/255-528; 
#=GS V4LLV9/255-528      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS V4N5M9/255-522      AC V4N5M9
#=GS V4N5M9/255-522      OS Eutrema salsugineum
#=GS V4N5M9/255-522      DE Uncharacterized protein
#=GS V4N5M9/255-522      DR GENE3D; f36c47b6f344972f4e474c4c251ff4ae/255-522; 
#=GS V4N5M9/255-522      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A0B0P4L0/212-477  AC A0A0B0P4L0
#=GS A0A0B0P4L0/212-477  OS Gossypium arboreum
#=GS A0A0B0P4L0/212-477  DE WD repeat-containing 26
#=GS A0A0B0P4L0/212-477  DR GENE3D; 5826b5ec3035320e41a9afe0596153f8/212-477; 
#=GS A0A0B0P4L0/212-477  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malvales; Malvaceae; Malvoideae; Gossypium; Gossypium arboreum; 
#=GF TC 550.9 2.5E-169
#=GF SQ 15
Q9FNN2/256-522              QCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYI--------WHRSTGK----
A0A178U8E6/1-258            ----------MVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYI--------WHRSTGKL---
A0A0D3B0B6/256-523          QCGKHQIPSRTVQILESHTDEVWFLQFSHNGKYLASSSKDQAAIIWEIKADGQFSLKHKLVGHQKPVTAILWSPDDRQVLTCGAEEVIRRWNVDSGDCIHTYEKGGIGPISCGWYSDGQGIIAGMTDRSICMWDLDGRELECWKGQRTQKVSDIAMTDDGKWVVSVCKGSVISLFDREATVERLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGDPKIVMRYKGHKRSRFLIRSCFGGYQQAFIASGSEDSLVYI--------WHRSTGKL---
D7M1F6/255-522              QCGQHQIPSQTVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEICADGHTSLKHTLVGHQKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHIYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGRELECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILVNLHNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFVASGSEDSQVYI--------WHRSTGKL---
M4CP66/39-306               QCGKHQIPSRTVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEINADGHFSLKHKLVGHQKPVTAILWSPDDRQVLSCGAEEVIKRWDVDSGDCIHTYEKGGIGPISCGWYSDGQGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWVVSVCKGSVISLFDREATVERLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGEPKIVMRYKGHKRSRFLIRSCFGGYKQAFIASGSEDSQVYI--------WHRSTGKL---
R0FDK4/255-522              QCGKHQIPSQTVQILASHTDEVWFLQFSHNGKYLASSSKDQTAIIWEINVDGQISLKHTLVGHQKPVISILWSPDDRQVLTCGAEEVIRRWDVDSGGCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREIECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGDPKIVSRYKGHRRSRFIIRSCFGGYKQAFIASGSEDSQVYI--------WHRSTGKL---
A0A078G529/246-513          QCGKHQIPSQTVQILESHTDEVWFLQYSHNGKYLASSSKDQTAIIWEINANGHMSLKHKLVGHQKPVTAILWSPDDSQVLTCGAEEVIRRWDVDSGDCLHTYEKGGIGPISCGWYSDGKGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEETITSFSLSNDNKYVLVNLLNQEIRLWSIEGDPKIVTRYKGHKRSRFLIRSCFGGYEQGFIASGSEDSQVYI--------WHRSTGKL---
A0A0D3EGT9/246-512          QCGKHQIPSQTVQILESHTDEVWFLQYSHNGKYLASSSKDQTAIIWEINEDGHMSLKHKLVGHQKPVTAVLWSPDDSQVLTCGAEEVIRRWDVDSGDCLHTYEKGGIGPISCGWYSDGKGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDTITSFSLSNDNKYVLVNLLNQEIRLWSIEGDPKIVTRYKGHKRSRFLIRSCFGGYEQGFIASGSEDSQVYI--------WHRSTGK----
A0A078CT71/257-524          QCGKHQIPSRTVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIKADGQFSLKHKLVGHQKPVTAILWSPDDRQVLTCGAEEVIRRWNVDSGDCIHTYEKGGIGPISCGWYSDGQGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWVVSVCKGSVISLFDREATVERLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGEPKIVMRYKGHKRSRFLIRSCFGGYKQAFIASGSEDSQVYI--------WHRSTGKL---
A0A078D1A5/257-524          QCGKHQIPSRTVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIKADGQFSLKHKLVGHQKPVTAILWSPDDRQVLTCGAEEVIRRWNVDSGDCIHTYEKGGIGPISCGWYSDGQGIIAGMTDRSICMWDLDGREIECWKGQRTQKVSDIAMTDDGKWVVSVCKGSVISLFDREATVERLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGDPKIVMRYKGHKRSRFLIRSCFGGYQQAFIASGSEDSLVYI--------WHRSTGKL---
A0A078C175/248-518          QCGKHQIPSQTVQILESHTDEVWFLQYSHNGKYLASSSKDQTAIIWEVNANGHMSLKHKLVGHQKPVTAVLWSPDDSQVLTCGAEEVIRRWDVDSGDSLHTYEKSGVGPISCGWYADGKGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDTITSFSLSNDNRYVLVNLLNQEIRLWSIEGDPKIVTRYKGHKRSRFLIRSCFGGYEQGFIASGSEDSQVYI--------WHRSTGKLIIE
M4CYQ4/248-518              QCGKHQIPSQTVQILESHTDEVWFLQYSHNGKYLASSSKDQTAIIWEVNANGHMSLKHKLVGHQKPVTAVLWSPDDSQVLTCGAEEVIRRWDVDSGDSLHTYEKSGVGPISCGWYADGKGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDTITSFSLSNDNRYVLVNLLNQEIRLWSIEGDPKIVTRYKGHKRSRFLIRSCFGGYEQGFIASGSEDSQVYI--------WHRSTGKLIIE
V4LLV9/255-528              QCGKHQIPSQTVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEINADGHISVKHTLVGHQKPVIAILWSPDDRQVLTCGSEEVIRRWDVDSGDCVHMYEKGGIGPISCGWYPDGQGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVEKLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGDPKIVARYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVKISSFLRIVSSHKHIK-----
V4N5M9/255-522              QCGKHQIPSQTVQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEINADGHISVKHTLVGHQKPVIAILWSPDDRQVLTCGSEEVIRRWDVDSGDCVHMYEKGGIGPISCGWYPDGQGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVEKLIEEEDMITSFSLSNDNKYLLVNLLNQEIRLWNIEGDPKIVARYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYI--------WHRSTGKL---
A0A0B0P4L0/212-477          QCGKNQIPSQTLQILEAHKNEVWFVQFSHNGKYLGSSSKDHSAIIWEVKEDGQVLLKHTLCGHQKPVLIVSWSPDDSQILTCGQDEVIRRWDVSSGKCLHVYEKTGVGLISCGWFPDGRGIFAGMTDKSICLWDLDGRDLECWKGQRTLRISDMAITDDGKRIISVCRESAILLLDREAKFDRLIEEVDMITSFSLSKDNKFLLVNLMNQEIHLWSIEGDPKLISEYKGHKRTRFVIRSCFGGLDQSFIASGSEDSQVYI--------WHRCSG-----
#=GC scorecons              777767777577999879779999797999999979999976999997467964679959699799956769999959798995799989979799675959996976799999859969979999979997999999759999999967799797999997679997697969799997778999968699999997998869999799997996999899774799998979959999999759598999999979790000000079866753000
#=GC scorecons_70           ****_****_**************************************__***_****_********_********_******_**************_*_***_**********_**_********************_****************************_*********************************_************_********_**********_********_*_*************________******_____
#=GC scorecons_80           ***__****_*_******_**********************_******__**___***_*_******__*_*****_******_************_*_*_***_**_*******_**_********************_********_*************_*****_***_******_*******_*_************_****_*******_********_**********_*******__*_*************________***__*_____
#=GC scorecons_90           ____________****_*__****_*_*******_*****__*****____*____**_*_**_***____*****_*_****__******_*_**___*_***_*___******_**_**_*****_***_******__********___**_*_*****___***__*_*_*_****____****_*_*******_****_****_****_**_******____******_**_*******__*_*********_*_*_________**________
//