# STOCKHOLM 1.0
#=GF ID 2.10.70.10/FF/17019
#=GF DE C4b-binding protein alpha chain
#=GF AC 2.10.70.10/FF/17019
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 91.622
#=GS P04003/296-361      AC P04003
#=GS P04003/296-361      OS Homo sapiens
#=GS P04003/296-361      DE C4b-binding protein alpha chain
#=GS P04003/296-361      DR GENE3D; 52559319b137ce6aa6e969f5ee006d87/296-361; 
#=GS P04003/296-361      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P04003/296-361      DR GO; GO:0003723; GO:0005515; GO:0005576; GO:0005615; GO:0005886; GO:0030449; GO:0044216; GO:0045732; GO:0045959; GO:0072562; GO:1903027; 
#=GS Q63514/260-327      AC Q63514
#=GS Q63514/260-327      OS Rattus norvegicus
#=GS Q63514/260-327      DE C4b-binding protein alpha chain
#=GS Q63514/260-327      DR GENE3D; 851e93fac724345bd1465cc127e85f57/260-327; 
#=GS Q63514/260-327      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS Q63514/260-327      DR GO; GO:0001848; GO:0006955; 
#=GS H0WP65/296-360      AC H0WP65
#=GS H0WP65/296-360      OS Otolemur garnettii
#=GS H0WP65/296-360      DE Uncharacterized protein
#=GS H0WP65/296-360      DR GENE3D; 109b910304f78084fbbd52e6b0dd4c48/296-360; 
#=GS H0WP65/296-360      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur; Otolemur garnettii; 
#=GS L5MFL6/296-363      AC L5MFL6
#=GS L5MFL6/296-363      OS Myotis davidii
#=GS L5MFL6/296-363      DE C4b-binding protein alpha chain
#=GS L5MFL6/296-363      DR GENE3D; 133588d673fd9af3c23dcdf710b14c63/296-363; 
#=GS L5MFL6/296-363      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis davidii; 
#=GS G1L9X2/302-369      AC G1L9X2
#=GS G1L9X2/302-369      OS Ailuropoda melanoleuca
#=GS G1L9X2/302-369      DE Uncharacterized protein
#=GS G1L9X2/302-369      DR GENE3D; 138625e36e28ea0cbc54de990b197a5e/302-369; 
#=GS G1L9X2/302-369      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda; Ailuropoda melanoleuca; 
#=GS A0A091CQS3/302-368  AC A0A091CQS3
#=GS A0A091CQS3/302-368  OS Fukomys damarensis
#=GS A0A091CQS3/302-368  DE C4b-binding protein alpha chain
#=GS A0A091CQS3/302-368  DR GENE3D; 1b17604d53da30653c071fdd6b029827/302-368; 
#=GS A0A091CQS3/302-368  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys; Fukomys damarensis; 
#=GS H2N3W0/311-378      AC H2N3W0
#=GS H2N3W0/311-378      OS Pongo abelii
#=GS H2N3W0/311-378      DE Uncharacterized protein
#=GS H2N3W0/311-378      DR GENE3D; 2b714c6ed88e3916e20bcd6bdc791f44/311-378; 
#=GS H2N3W0/311-378      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS G3R980/307-373      AC G3R980
#=GS G3R980/307-373      OS Gorilla gorilla gorilla
#=GS G3R980/307-373      DE Uncharacterized protein
#=GS G3R980/307-373      DR GENE3D; 2ed4040ea2c26e722722adca99705f51/307-373; 
#=GS G3R980/307-373      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS Q5M891/303-370      AC Q5M891
#=GS Q5M891/303-370      OS Rattus norvegicus
#=GS Q5M891/303-370      DE C4b-binding protein alpha chain
#=GS Q5M891/303-370      DR GENE3D; 4c59eb0b4df5883779e56e440c1e92fe/303-370; 
#=GS Q5M891/303-370      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS F6SQK3/295-361      AC F6SQK3
#=GS F6SQK3/295-361      OS Callithrix jacchus
#=GS F6SQK3/295-361      DE Uncharacterized protein
#=GS F6SQK3/295-361      DR GENE3D; 543ab18bc012def0504478c3f97e317c/295-361; 
#=GS F6SQK3/295-361      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A0D9RRE3/298-364  AC A0A0D9RRE3
#=GS A0A0D9RRE3/298-364  OS Chlorocebus sabaeus
#=GS A0A0D9RRE3/298-364  DE Uncharacterized protein
#=GS A0A0D9RRE3/298-364  DR GENE3D; 55204b5131ed9020352decf378622a94/298-364; 
#=GS A0A0D9RRE3/298-364  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS S9XGK8/870-936      AC S9XGK8
#=GS S9XGK8/870-936      OS Camelus ferus
#=GS S9XGK8/870-936      DE Uncharacterized protein
#=GS S9XGK8/870-936      DR GENE3D; 63827cf88f2734663c5a9c41fcf69e3f/870-936; 
#=GS S9XGK8/870-936      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Tylopoda; Camelidae; Camelus; Camelus ferus; 
#=GS H2Q114/296-361      AC H2Q114
#=GS H2Q114/296-361      OS Pan troglodytes
#=GS H2Q114/296-361      DE Uncharacterized protein
#=GS H2Q114/296-361      DR GENE3D; 672a5bd0616713c91feb5d68322aacde/296-361; 
#=GS H2Q114/296-361      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS G1QJR5/153-218      AC G1QJR5
#=GS G1QJR5/153-218      OS Nomascus leucogenys
#=GS G1QJR5/153-218      DE Uncharacterized protein
#=GS G1QJR5/153-218      DR GENE3D; 6df1391da1da877b5af7fd3c779e855f/153-218; 
#=GS G1QJR5/153-218      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS F7IKA2/236-302      AC F7IKA2
#=GS F7IKA2/236-302      OS Callithrix jacchus
#=GS F7IKA2/236-302      DE Uncharacterized protein
#=GS F7IKA2/236-302      DR GENE3D; 7016234fc07b909891fe00cebb1c6a26/236-302; 
#=GS F7IKA2/236-302      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS F6SRJ4/234-300      AC F6SRJ4
#=GS F6SRJ4/234-300      OS Callithrix jacchus
#=GS F6SRJ4/234-300      DE Uncharacterized protein
#=GS F6SRJ4/234-300      DR GENE3D; 753c564862657f5c2d1310c8f86c326d/234-300; 
#=GS F6SRJ4/234-300      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS S7QEE1/254-321      AC S7QEE1
#=GS S7QEE1/254-321      OS Myotis brandtii
#=GS S7QEE1/254-321      DE C4b-binding protein alpha chain
#=GS S7QEE1/254-321      DR GENE3D; 8f8331c55c73800e8fa1948fc7b06b7e/254-321; 
#=GS S7QEE1/254-321      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis brandtii; 
#=GS Q28065/296-363      AC Q28065
#=GS Q28065/296-363      OS Bos taurus
#=GS Q28065/296-363      DE C4b-binding protein alpha chain
#=GS Q28065/296-363      DR GENE3D; 96f1d41d8db90a2cfcf0e56219459edd/296-363; 
#=GS Q28065/296-363      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS G1P9A5/306-371      AC G1P9A5
#=GS G1P9A5/306-371      OS Myotis lucifugus
#=GS G1P9A5/306-371      DE Uncharacterized protein
#=GS G1P9A5/306-371      DR GENE3D; 988ce4c6f1b4492ddacb580caaf12f21/306-371; 
#=GS G1P9A5/306-371      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis lucifugus; 
#=GS M3YEL9/302-369      AC M3YEL9
#=GS M3YEL9/302-369      OS Mustela putorius furo
#=GS M3YEL9/302-369      DE Uncharacterized protein
#=GS M3YEL9/302-369      DR GENE3D; a77ff7c4c2b3f36e7c3589019ff5dcee/302-369; 
#=GS M3YEL9/302-369      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Mustelinae; Mustela; Mustela putorius; Mustela putorius furo; 
#=GS A0A0K8RQQ4/126-189  AC A0A0K8RQQ4
#=GS A0A0K8RQQ4/126-189  OS Ixodes ricinus
#=GS A0A0K8RQQ4/126-189  DE Putative domain abundant in complement control protein
#=GS A0A0K8RQQ4/126-189  DR GENE3D; aa79cc28b1bdd3b7350b4c22171c7a99/126-189; 
#=GS A0A0K8RQQ4/126-189  DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes ricinus; 
#=GS M3WJK3/297-364      AC M3WJK3
#=GS M3WJK3/297-364      OS Felis catus
#=GS M3WJK3/297-364      DE Uncharacterized protein
#=GS M3WJK3/297-364      DR GENE3D; c181ba61d4a98b93fbfcd502ca014212/297-364; 
#=GS M3WJK3/297-364      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS G3T0X1/262-328      AC G3T0X1
#=GS G3T0X1/262-328      OS Loxodonta africana
#=GS G3T0X1/262-328      DE Uncharacterized protein
#=GS G3T0X1/262-328      DR GENE3D; cced52622b6966492911879b8d34eda3/262-328; 
#=GS G3T0X1/262-328      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Afrotheria; Proboscidea; Elephantidae; Loxodonta; Loxodonta africana; 
#=GS F6RNZ2/297-362      AC F6RNZ2
#=GS F6RNZ2/297-362      OS Macaca mulatta
#=GS F6RNZ2/297-362      DE Uncharacterized protein
#=GS F6RNZ2/297-362      DR GENE3D; dbf75f4bd1fe4c19d81220050497d7d8/297-362; 
#=GS F6RNZ2/297-362      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS W5PBY2/296-360      AC W5PBY2
#=GS W5PBY2/296-360      OS Ovis aries
#=GS W5PBY2/296-360      DE Uncharacterized protein
#=GS W5PBY2/296-360      DR GENE3D; e72efd17182e7b54dd16add3179ce63f/296-360; 
#=GS W5PBY2/296-360      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS W5PBY0/310-374      AC W5PBY0
#=GS W5PBY0/310-374      OS Ovis aries
#=GS W5PBY0/310-374      DE Uncharacterized protein
#=GS W5PBY0/310-374      DR GENE3D; eb7b5342983e7077f5de31ac6a8e147c/310-374; 
#=GS W5PBY0/310-374      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS F7BNQ2/302-369      AC F7BNQ2
#=GS F7BNQ2/302-369      OS Equus caballus
#=GS F7BNQ2/302-369      DE Uncharacterized protein
#=GS F7BNQ2/302-369      DR GENE3D; f8d63c797052ad7eceb27dfe6a2092d9/302-369; 
#=GS F7BNQ2/302-369      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS G7NUP5/297-362      AC G7NUP5
#=GS G7NUP5/297-362      OS Macaca fascicularis
#=GS G7NUP5/297-362      DE Putative uncharacterized protein
#=GS G7NUP5/297-362      DR GENE3D; f93d77c3b2e9e60cc37293c41ea82463/297-362; 
#=GS G7NUP5/297-362      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A096N7V3/296-361  AC A0A096N7V3
#=GS A0A096N7V3/296-361  OS Papio anubis
#=GS A0A096N7V3/296-361  DE Uncharacterized protein
#=GS A0A096N7V3/296-361  DR GENE3D; fbc528f13d5d7bc2b36df55b34e881b6/296-361; 
#=GS A0A096N7V3/296-361  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS F1PGM9/281-348      AC F1PGM9
#=GS F1PGM9/281-348      OS Canis lupus familiaris
#=GS F1PGM9/281-348      DE Uncharacterized protein
#=GS F1PGM9/281-348      DR GENE3D; c403e2f854bac7c416a9088c848d303d/281-348; 
#=GS F1PGM9/281-348      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GF TC 111.1 2.7E-35
#=GF SQ 30
P04003/296-361              --PNSCINLPDIPHASWET--YPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTTVICQKNLRWTPYQGCE--
Q63514/260-327              --LNSCTDIPDIPNAALIT--SPRPRKEDVYPVGTVLRYICRPGYEPATRQPMTVICQKDLSWSMLRGCKEI
H0WP65/296-360              --LNSCTGLPDIPHASW---GYPRPRKEERYAVGTVFKYYCHSGYTPRVNEHTTVTCQENLRWTPYKGCK--
L5MFL6/296-363              --IYSCTNLSAIPHASWEIYNRRLPTKDELYEVGTVLRYRCHPGYKTARNKPMTVTCQENLEWTPYEECE--
G1L9X2/302-369              --LSSCTDLPNIPNAYWERYNNHVPTKEQIYNIGTVLRYKCHSGYEPALDAPTTVTCQRNLTWTPHIGCK--
A0A091CQS3/302-368          -EPNSCTDLPDIPNASWDE--YIRPRRGNLYSPGTVFKYYCHPGYRPATHEPTTVTCQSDFKWSPFKGCK--
H2N3W0/311-378              YTTDSCTNLPDIPHASWET--YPRPTKEDVYVVGTVLRYRCHPGYKPTTDAPTTVICQKNLRWTPYQGCE--
G3R980/307-373              -RVDSCTNLPDIPHASWET--YPRPTKEDVYVVGTVLRYRCHPGYKPTTDAPTTVICQKNFRWTPYQGCE--
Q5M891/303-370              --LNSCTDIPDIPNAALIT--SPRPRKEDVYPVGTVLRYICRPGYEPATRQPMTVICQKDLSWSMLRGCKEI
F6SQK3/295-361              -EPNSCTNLPDIPHAMWQG--YPKPSKEDVHVVGTVLTYRCHPGYKPATDAPMTVTCQKNLTWTPFQGCE--
A0A0D9RRE3/298-364          -RVDSCTNLPDIPHASWET--YPRPKKEDVYVVGTILRYRCHPGYKPTTDAPTTLICQKNLRWTPYQGCE--
S9XGK8/870-936              --LNSCIGLPDIPHSTWEGYISYMRAEEKVYEVGTTLRYSCQPGYKPAANEPTTVTCQEDLMWTPSKGC---
H2Q114/296-361              --PNSCTNLPDIPHASWET--YPRPTKEDVYVVGTLLRYRCHPGYKPTTDEPMTVICQKNLRWTPYQGCE--
G1QJR5/153-218              --PNSCTNLTDIPHASWET--YPRPTKEDVYVVGTVLRYRCHPGYKPTTDAPTTVICQKNLRWTPYQGCE--
F7IKA2/236-302              -RVDSCTNLPDIPHAMWQG--YPKPSKEDVHVVGTVLTYRCHPGYKPATDAPMTVTCQKNLTWTPFQGCE--
F6SRJ4/234-300              -EPNSCTNLPDIPHAMWQG--YPKPSKEDVHVVGTVLTYRCHPGYKPATDAPMTVTCQKNLTWTPFQGCE--
S7QEE1/254-321              --IYSCTNLSDIPHASWEPYNYRLPTKDELYEVGTVLRYRCHPGYKTARNKPKIVTCQRNLEWTPYEECE--
Q28065/296-363              --LNGCLGLPHIPHALWERYDHQTQTEQQVYDIGFVLSYKCHFGYKPETDGPTTVTCQSNLEWSPYIECK--
G1P9A5/306-371              ----SCTNLSDIPHASWEPYNHRLPTKDELYEVGTVLRYRCHPGYKTAGNEPKIVTCQRNLEWTPYEECE--
M3YEL9/302-369              --LNSCTDLPDIPNASWERYNNHEPTKEQMYNIGTVLRYTCSAGYKPVSDGPTTVTCQRNLTWTPHIGCK--
A0A0K8RQQ4/126-189          ------TDLPDIPHSSWETREYHRPTKDEMYEVGTALRYRCHPGYKPAGNKPTTVTCQNNFSWTPYVECE--
M3WJK3/297-364              --LNSCLGLPDIPHTSWEMYNYQMPTKQGVYPIGTMLKYRCRDGYKPISDEPTTVICQENLTWTPYIECK--
G3T0X1/262-328              ---NSCINLPDIPHASWETRYNYRPRKDNMYSIGTVLRYHCNAGYRPISNEPTTVMCQEDLTWTPYKGCE--
F6RNZ2/297-362              --PSSCTNLPDIPHASWET--YPRPKKEDVYVVGTILRYRCHPGYKPTTDAPTTLICQKNLRWTPYQGCE--
W5PBY2/296-360              --LNGCVGLPHIPHASWGRYGYQTQTKHEVYDIGTVLSYNCHFGYKPEADGPRTVTCQSNLKWSPYI-----
W5PBY0/310-374              --LNGCVGLPHIPHASWGRYGYQTQTKHEVYDIGTVLSYNCHFGYKPEADGPRTVTCQSNLKWSPYI-----
F7BNQ2/302-369              --LNGCTNLPDIPNAFWERYRYQRPTKEDVYNVGTVLKYHCLTGYKPASDKPTAVICQEDFRWTPYTECE--
G7NUP5/297-362              --PSSCTNLPDIPHASWET--YPRPKKEDVYVVGTILRYRCHPGYKPTTDAPTTLICQKNLRWTPYQGCE--
A0A096N7V3/296-361          --PSSCTNLPDIPHASWET--YPRPKKEDVYVVGTILRYRCHPGYKPTTDAPMTLICQKNLRWTPYQGCE--
F1PGM9/281-348              --LNSCPELPNIPNAYWERQNSFLSKKQQMFSIGTTLSYRCHFGYEPASDGPTTLTCQKNLTWTPHIECK--
#=GC scorecons              004568658769967575311544647556836986859496599674464857769947749676357400
#=GC scorecons_70           ____**__*******_*_______*_*___*_*****_*_**_****____*_**_**_**_****__*___
#=GC scorecons_80           _____*__**_**_*_*_________*___*__**_*_*_*__**_*____*_**_**_**_*_*___*___
#=GC scorecons_90           _____*__*__**_________________*__**_*_*_*__**______*____**____*_________
//