# STOCKHOLM 1.0 #=GF ID 2.10.110.10/FF/5781 #=GF DE LIM domain-containing protein PLIM2c #=GF AC 2.10.110.10/FF/5781 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 53.280 #=GS O80839/100-170 AC O80839 #=GS O80839/100-170 OS Arabidopsis thaliana #=GS O80839/100-170 DE LIM domain-containing protein PLIM2a #=GS O80839/100-170 DR GENE3D; 576e5c6b6b02bcc892ad16ca35ed4333/100-170; #=GS O80839/100-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS O80839/100-170 DR GO; GO:0051015; GO:0051017; #=GS Q1ECF5/98-168 AC Q1ECF5 #=GS Q1ECF5/98-168 OS Arabidopsis thaliana #=GS Q1ECF5/98-168 DE LIM domain-containing protein PLIM2b #=GS Q1ECF5/98-168 DR GENE3D; 25bf479f818193c95e8dbf00ffea8b96/98-168; #=GS Q1ECF5/98-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q1ECF5/98-168 DR GO; GO:0051015; GO:0051017; #=GS A0A178VQD3/100-170 AC A0A178VQD3 #=GS A0A178VQD3/100-170 OS Arabidopsis thaliana #=GS A0A178VQD3/100-170 DE PLIM2a #=GS A0A178VQD3/100-170 DR GENE3D; 576e5c6b6b02bcc892ad16ca35ed4333/100-170; #=GS A0A178VQD3/100-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178WGL7/98-168 AC A0A178WGL7 #=GS A0A178WGL7/98-168 OS Arabidopsis thaliana #=GS A0A178WGL7/98-168 DE PLIM2b #=GS A0A178WGL7/98-168 DR GENE3D; 25bf479f818193c95e8dbf00ffea8b96/98-168; #=GS A0A178WGL7/98-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS M4CL53/99-213 AC M4CL53 #=GS M4CL53/99-213 OS Brassica rapa subsp. pekinensis #=GS M4CL53/99-213 DE Uncharacterized protein #=GS M4CL53/99-213 DR GENE3D; 00de3ca78232f63d0b3fe994df598dac/99-213; #=GS M4CL53/99-213 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A078CD23/99-213 AC A0A078CD23 #=GS A0A078CD23/99-213 OS Brassica napus #=GS A0A078CD23/99-213 DE BnaA05g05130D protein #=GS A0A078CD23/99-213 DR GENE3D; 00de3ca78232f63d0b3fe994df598dac/99-213; #=GS A0A078CD23/99-213 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078GRV8/99-212 AC A0A078GRV8 #=GS A0A078GRV8/99-212 OS Brassica napus #=GS A0A078GRV8/99-212 DE BnaC04g50470D protein #=GS A0A078GRV8/99-212 DR GENE3D; 3da5b48028bfa4d5d4d988444abb5ddf/99-212; #=GS A0A078GRV8/99-212 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS R0HZ17/100-214 AC R0HZ17 #=GS R0HZ17/100-214 OS Capsella rubella #=GS R0HZ17/100-214 DE Uncharacterized protein #=GS R0HZ17/100-214 DR GENE3D; 511e3378fc295fbc65b1e8939ce4b5f2/100-214; #=GS R0HZ17/100-214 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A078G083/99-211 AC A0A078G083 #=GS A0A078G083/99-211 OS Brassica napus #=GS A0A078G083/99-211 DE BnaC04g04510D protein #=GS A0A078G083/99-211 DR GENE3D; 7fade5d6b04a17cb77cdc3a64b7e2308/99-211; #=GS A0A078G083/99-211 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4FDZ2/99-213 AC M4FDZ2 #=GS M4FDZ2/99-213 OS Brassica rapa subsp. pekinensis #=GS M4FDZ2/99-213 DE Uncharacterized protein #=GS M4FDZ2/99-213 DR GENE3D; 82bba54f86587b86c28b83bbe2a8a16f/99-213; #=GS M4FDZ2/99-213 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A078HH92/99-213 AC A0A078HH92 #=GS A0A078HH92/99-213 OS Brassica napus #=GS A0A078HH92/99-213 DE BnaA04g26440D protein #=GS A0A078HH92/99-213 DR GENE3D; f55f796c55c36702a6a4078d123c6ba9/99-213; #=GS A0A078HH92/99-213 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS V4LN99/100-170 AC V4LN99 #=GS V4LN99/100-170 OS Eutrema salsugineum #=GS V4LN99/100-170 DE Uncharacterized protein #=GS V4LN99/100-170 DR GENE3D; 31bbd5ac9832e61a3ff52004f9413430/100-170; #=GS V4LN99/100-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A078E2Y0/100-168 AC A0A078E2Y0 #=GS A0A078E2Y0/100-168 OS Brassica napus #=GS A0A078E2Y0/100-168 DE BnaC03g25470D protein #=GS A0A078E2Y0/100-168 DR GENE3D; e5de55e8e12249fed06cd584e3bc9443/100-168; #=GS A0A078E2Y0/100-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078I6G2/82-152 AC A0A078I6G2 #=GS A0A078I6G2/82-152 OS Brassica napus #=GS A0A078I6G2/82-152 DE BnaCnng13620D protein #=GS A0A078I6G2/82-152 DR GENE3D; 3925e90624b9093a0686592302c7b0da/82-152; #=GS A0A078I6G2/82-152 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078D4Z8/101-168 AC A0A078D4Z8 #=GS A0A078D4Z8/101-168 OS Brassica napus #=GS A0A078D4Z8/101-168 DE BnaA03g21170D protein #=GS A0A078D4Z8/101-168 DR GENE3D; 6c9b248d7f20f7aaac89c4ae91162fa3/101-168; #=GS A0A078D4Z8/101-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4C876/98-168 AC M4C876 #=GS M4C876/98-168 OS Brassica rapa subsp. pekinensis #=GS M4C876/98-168 DE Uncharacterized protein #=GS M4C876/98-168 DR GENE3D; 74cbcc6e4336e85ed644825460c69d4a/98-168; #=GS M4C876/98-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A078DNI4/98-168 AC A0A078DNI4 #=GS A0A078DNI4/98-168 OS Brassica napus #=GS A0A078DNI4/98-168 DE BnaA10g00230D protein #=GS A0A078DNI4/98-168 DR GENE3D; 5a0e153d90c129f76afdab32925cf456/98-168; #=GS A0A078DNI4/98-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4EWP9/98-168 AC M4EWP9 #=GS M4EWP9/98-168 OS Brassica rapa subsp. pekinensis #=GS M4EWP9/98-168 DE Uncharacterized protein #=GS M4EWP9/98-168 DR GENE3D; 5a0e153d90c129f76afdab32925cf456/98-168; #=GS M4EWP9/98-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A0D3C6G9/100-170 AC A0A0D3C6G9 #=GS A0A0D3C6G9/100-170 OS Brassica oleracea var. oleracea #=GS A0A0D3C6G9/100-170 DE Uncharacterized protein #=GS A0A0D3C6G9/100-170 DR GENE3D; 04d0051e470c18322fe3fdca08e9afe0/100-170; #=GS A0A0D3C6G9/100-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS D7KP73/98-168 AC D7KP73 #=GS D7KP73/98-168 OS Arabidopsis lyrata subsp. lyrata #=GS D7KP73/98-168 DE LIM domain-containing protein #=GS D7KP73/98-168 DR GENE3D; a9c7ceda9545cea521338fb3d60c3ba7/98-168; #=GS D7KP73/98-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS V4N248/100-170 AC V4N248 #=GS V4N248/100-170 OS Eutrema salsugineum #=GS V4N248/100-170 DE Uncharacterized protein #=GS V4N248/100-170 DR GENE3D; dd1ec2fa394dc01a2272007faee70619/100-170; #=GS V4N248/100-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS D7LD90/100-170 AC D7LD90 #=GS D7LD90/100-170 OS Arabidopsis lyrata subsp. lyrata #=GS D7LD90/100-170 DE LIM domain-containing protein #=GS D7LD90/100-170 DR GENE3D; cca94ce7a479f591e65ea482931b1a6d/100-170; #=GS D7LD90/100-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GF TC 159.4 1.7E-50 #=GF SQ 22 O80839/100-170 -SGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNH---------------------------------------------- Q1ECF5/98-168 -CGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAH---------------------------------------------- A0A178VQD3/100-170 -SGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNH---------------------------------------------- A0A178WGL7/98-168 -CGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAH---------------------------------------------- M4CL53/99-213 FSGTQDKCATCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNNVHQAAAKHRRSASSGASSPPSEEQKPEDNASIPEGEGGGEEEA--- A0A078CD23/99-213 FSGTQDKCATCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNNVHQAAAKHRRSASSGASSPPSEEQKPEDNASIPEGEGGGEEEA--- A0A078GRV8/99-212 FSGTQDKCASCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRTASSGASTPPSDDHKPEDNAAIPEGEAGGEEE---- R0HZ17/100-214 -SGTQDKCATCKKTVYPLEKVTMEGECYHKNCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDQKPSDSASIPEGK--DEEAVPEA A0A078G083/99-211 FSGTQDKCATCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNNVHQAAAKHRRSASSGASSPPSEEQKPEDNTSIPGGEGGEEE----- M4FDZ2/99-213 FSGTQDKCASCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRTASSGASTPPSDDHKPEDNAAIPEGEAGGEEEA--- A0A078HH92/99-213 FSGTQDKCASCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRTASSGASTPPSDDHKPEDNAAIPEGDAGEEEAV--- V4LN99/100-170 -SGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALNGILYCKVHFSQLFLEKGNYNH---------------------------------------------- A0A078E2Y0/100-168 ---TQDKCATCQKTVYPLEKVTMEGECFHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNN---------------------------------------------- A0A078I6G2/82-152 -SGTQDKCAACKKTVYPLEKMTMEGESYHKACFRCAHSGCPLTHSSYAALNGILYCKVHFSQLFLEKGNYNH---------------------------------------------- A0A078D4Z8/101-168 ----QDKCATCQKTVYPLEKVTMEGECFHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNN---------------------------------------------- M4C876/98-168 -SGTRDKCATCQKTVYPLEKVTMEGECFHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNN---------------------------------------------- A0A078DNI4/98-168 -CGTQDKCAACEKTVYPLEKVQMEGECFHKTCFRCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAH---------------------------------------------- M4EWP9/98-168 -CGTQDKCAACEKTVYPLEKVQMEGECFHKTCFRCAHGGCTLTHSSYASLDGVLYCRHHFNQLFLEKGNYAH---------------------------------------------- A0A0D3C6G9/100-170 -SGTQDKCASCHKTVYPLEKVNMEGECYHKTCFKCAHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNH---------------------------------------------- D7KP73/98-168 -CGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFLEKGNYAH---------------------------------------------- V4N248/100-170 -SGTQDKCATCHKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNH---------------------------------------------- D7LD90/100-170 -SGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCSHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNH---------------------------------------------- #=GC scorecons 1578899995959999999975999977997997979799799999998977899976998999899969661111110111011111101111111111110111110101100000 #=GC scorecons_70 __*******_*_*********_**************************************************______________________________________________ #=GC scorecons_80 __*******_*_*********_****_******_***_**_****************_**********_*________________________________________________ #=GC scorecons_90 ___******_*_********__****__**_**_*_*_**_*********__****__**********_*________________________________________________ //