# STOCKHOLM 1.0
#=GF ID 1.25.40.90/FF/3037
#=GF DE Regulator of Ty1 transposition protein 103
#=GF AC 1.25.40.90/FF/3037
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 53.751
#=GS 2km4A00/1-142     AC Q05543
#=GS 2km4A00/1-142     OS Saccharomyces cerevisiae S288C
#=GS 2km4A00/1-142     DE Regulator of Ty1 transposition protein 103
#=GS 2km4A00/1-142     DR CATH; 2km4; A:2-138; 
#=GS 2km4A00/1-142     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2km4A00/1-142     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS 2l0iA00/1-142     AC Q05543
#=GS 2l0iA00/1-142     OS Saccharomyces cerevisiae S288C
#=GS 2l0iA00/1-142     DE Regulator of Ty1 transposition protein 103
#=GS 2l0iA00/1-142     DR CATH; 2l0i; A:2-137; 
#=GS 2l0iA00/1-142     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2l0iA00/1-142     DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS Q05543/1-137      AC Q05543
#=GS Q05543/1-137      OS Saccharomyces cerevisiae S288C
#=GS Q05543/1-137      DE Regulator of Ty1 transposition protein 103
#=GS Q05543/1-137      DR GENE3D; ce15e7f4db1b94763fdffe23f56ef2e6/1-137; 
#=GS Q05543/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q05543/1-137      DR GO; GO:0000790; GO:0000993; GO:0010526; GO:0031124; GO:0035861; GO:0042769; 
#=GS O74814/1-140      AC O74814
#=GS O74814/1-140      OS Schizosaccharomyces pombe 972h-
#=GS O74814/1-140      DE UPF0400 protein C337.03
#=GS O74814/1-140      DR GENE3D; 37790d73fb11807ab78fb4fa7aad9920/1-140; 
#=GS O74814/1-140      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O74814/1-140      DR GO; GO:0005634; GO:0005829; GO:0030846; GO:0031139; 
#=GS A0A0L8VTE8/1-137  AC A0A0L8VTE8
#=GS A0A0L8VTE8/1-137  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VTE8/1-137  DE RTT103p Protein involved in transcription termination by RNA polymerase II
#=GS A0A0L8VTE8/1-137  DR GENE3D; 0f6566f565cad33e038f4c6912c04cf0/1-137; 
#=GS A0A0L8VTE8/1-137  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS G2WB28/1-137      AC G2WB28
#=GS G2WB28/1-137      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WB28/1-137      DE K7_Rtt103p
#=GS G2WB28/1-137      DR GENE3D; 1ce1a4d1fa51bf99acb1de22e2dfa687/1-137; 
#=GS G2WB28/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GEB9/1-137      AC H0GEB9
#=GS H0GEB9/1-137      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GEB9/1-137      DE Rtt103p
#=GS H0GEB9/1-137      DR GENE3D; 45e2faa565b206ee0e9374881ad02727/1-137; 
#=GS H0GEB9/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS B3LG05/1-137      AC B3LG05
#=GS B3LG05/1-137      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LG05/1-137      DE Uncharacterized protein
#=GS B3LG05/1-137      DR GENE3D; 5559777605a6f4276e35419a3e546824/1-137; 
#=GS B3LG05/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VGG5/1-137      AC B5VGG5
#=GS B5VGG5/1-137      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VGG5/1-137      DE YDR289Cp-like protein
#=GS B5VGG5/1-137      DR GENE3D; 5559777605a6f4276e35419a3e546824/1-137; 
#=GS B5VGG5/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZYN8/1-137      AC A6ZYN8
#=GS A6ZYN8/1-137      OS Saccharomyces cerevisiae YJM789
#=GS A6ZYN8/1-137      DE Regulator of Ty1 transposition
#=GS A6ZYN8/1-137      DR GENE3D; 5559777605a6f4276e35419a3e546824/1-137; 
#=GS A6ZYN8/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z5K1/1-137      AC C8Z5K1
#=GS C8Z5K1/1-137      OS Saccharomyces cerevisiae EC1118
#=GS C8Z5K1/1-137      DE Rtt103p
#=GS C8Z5K1/1-137      DR GENE3D; 5559777605a6f4276e35419a3e546824/1-137; 
#=GS C8Z5K1/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7LT18/1-137      AC E7LT18
#=GS E7LT18/1-137      OS Saccharomyces cerevisiae Vin13
#=GS E7LT18/1-137      DE Rtt103p
#=GS E7LT18/1-137      DR GENE3D; 5559777605a6f4276e35419a3e546824/1-137; 
#=GS E7LT18/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GQU0/1-137      AC C7GQU0
#=GS C7GQU0/1-137      OS Saccharomyces cerevisiae JAY291
#=GS C7GQU0/1-137      DE Rtt103p
#=GS C7GQU0/1-137      DR GENE3D; 5559777605a6f4276e35419a3e546824/1-137; 
#=GS C7GQU0/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GT35/1-137      AC H0GT35
#=GS H0GT35/1-137      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GT35/1-137      DE Rtt103p
#=GS H0GT35/1-137      DR GENE3D; 5935516e4de611b3daa370c9efe951b3/1-137; 
#=GS H0GT35/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS J6EER3/1-137      AC J6EER3
#=GS J6EER3/1-137      OS Saccharomyces kudriavzevii IFO 1802
#=GS J6EER3/1-137      DE RTT103-like protein
#=GS J6EER3/1-137      DR GENE3D; c94cf38c18b170279a3da878ff9cf446/1-137; 
#=GS J6EER3/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS N1P560/1-137      AC N1P560
#=GS N1P560/1-137      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P560/1-137      DE Rtt103p
#=GS N1P560/1-137      DR GENE3D; ce15e7f4db1b94763fdffe23f56ef2e6/1-137; 
#=GS N1P560/1-137      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8RNV2/1-137  AC A0A0L8RNV2
#=GS A0A0L8RNV2/1-137  OS Saccharomyces eubayanus
#=GS A0A0L8RNV2/1-137  DE RTT103-like protein
#=GS A0A0L8RNV2/1-137  DR GENE3D; e4881a50ab31fcfa2ab468dd492f819a/1-137; 
#=GS A0A0L8RNV2/1-137  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GF TC 229.7 3.8E-72
#=GF SQ 17
2km4A00/1-142             MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
2l0iA00/1-142             MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
Q05543/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
O74814/1-140              MALTPDTVSSKLATLNETQESITGIAHWVMFHKRYADEIVQIWLEALYESSSN--KKLLLLYLLNEVVQQSRVKKISEYIDAVSPYVVNSVADAYASVPASIKTKIKYVFDVWCQRGIFSKEILLSLQERFNNAENSGHSNY
A0A0L8VTE8/1-137          MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
G2WB28/1-137              MPFSSEQFTTKLNTLEDSQESISSASEWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
H0GEB9/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
B3LG05/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
B5VGG5/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
A6ZYN8/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
C8Z5K1/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
E7LT18/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
C7GQU0/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
H0GT35/1-137              MPFSSEQFTTKLSTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRTSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVKDIERNLKSESSP-----
J6EER3/1-137              MPFSSEQFTTKLSTLEDSQESISSASKWLLLQYRDAPKVAETWKEYMLRTSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVKDIERNLKSESSP-----
N1P560/1-137              MPFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQVVNDIERSLKTESSP-----
A0A0L8RNV2/1-137          MPFSSEQFTTKLNTLEDSQESIASASKWLLLQYRDAPKVAETWKDYMLRSSVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLRKKLSRVVNILKERNIFSKQVVIDIDRNLKTETSP-----
#=GC scorecons            9566675566995996769999565659666649595676659484655595944799949996959999675699567496565466656655555595568596559567546959999676356654644534401000
#=GC scorecons_70         *_*__*____**_**_*_****_____*****_*_*__*_*_*_*_*___*_*__****_*****_****_*_***_**_*_________*_______*__**_**__*_**__**_*******__*___*___________
#=GC scorecons_80         *_________**_**___****_____*_____*_*______*_*_____*_*___***_***_*_****____**__*_*_________________*___*_*___*______*_****_____________________
#=GC scorecons_90         *_________**_**___****_____*_____*_*______*_*_____*_*___***_***_*_****____**____*_________________*___*_*___*______*_****_____________________
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