# STOCKHOLM 1.0 #=GF ID 1.25.40.10/FF/51021 #=GF DE Pentatricopeptide repeat-containing protein At5g55740, chloroplastic #=GF AC 1.25.40.10/FF/51021 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 59.614 #=GS Q9FM64/411-580 AC Q9FM64 #=GS Q9FM64/411-580 OS Arabidopsis thaliana #=GS Q9FM64/411-580 DE Pentatricopeptide repeat-containing protein At5g55740, chloroplastic #=GS Q9FM64/411-580 DR GENE3D; 4cd7c30d45b304fd452b9d8331f63f52/411-580; #=GS Q9FM64/411-580 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9FM64/411-580 DR GO; GO:0016556; #=GS G4XDX4/390-558 AC G4XDX4 #=GS G4XDX4/390-558 OS Lepidium sativum #=GS G4XDX4/390-558 DE Chlororespiratory reduction 21 #=GS G4XDX4/390-558 DR GENE3D; 16cd638a9aef802dc9bf1dd0e9237356/390-558; #=GS G4XDX4/390-558 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Lepidieae; Lepidium; Lepidium sativum; #=GS D7MKK8/405-576 AC D7MKK8 #=GS D7MKK8/405-576 OS Arabidopsis lyrata subsp. lyrata #=GS D7MKK8/405-576 DE Pentatricopeptide repeat-containing protein #=GS D7MKK8/405-576 DR GENE3D; 1c4cf31f23f4aeb64b9f916771cece0f/405-576; #=GS D7MKK8/405-576 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS G4XDX1/400-573 AC G4XDX1 #=GS G4XDX1/400-573 OS Capsella bursa-pastoris #=GS G4XDX1/400-573 DE Chlororespiratory reduction 21 #=GS G4XDX1/400-573 DR GENE3D; 20c6ff76e87c47dedaa55e7396959862/400-573; #=GS G4XDX1/400-573 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella bursa-pastoris; #=GS V4NAK1/411-582 AC V4NAK1 #=GS V4NAK1/411-582 OS Eutrema salsugineum #=GS V4NAK1/411-582 DE Uncharacterized protein #=GS V4NAK1/411-582 DR GENE3D; 4db2527916571d2b4daeb96db9d0587b/411-582; #=GS V4NAK1/411-582 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS G4XDX8/408-583 AC G4XDX8 #=GS G4XDX8/408-583 OS Nasturtium officinale #=GS G4XDX8/408-583 DE Chlororespiratory reduction 21 #=GS G4XDX8/408-583 DR GENE3D; 4fd7b9f3f8f2464f23aeac53021d4cb7/408-583; #=GS G4XDX8/408-583 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Cardamineae; Nasturtium; Nasturtium officinale; #=GS A0A087GBB1/410-585 AC A0A087GBB1 #=GS A0A087GBB1/410-585 OS Arabis alpina #=GS A0A087GBB1/410-585 DE Uncharacterized protein #=GS A0A087GBB1/410-585 DR GENE3D; 5448385a52f6063b0e2c065a4e537195/410-585; #=GS A0A087GBB1/410-585 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS G4XDY1/388-559 AC G4XDY1 #=GS G4XDY1/388-559 OS Matthiola maderensis #=GS G4XDY1/388-559 DE Chlororespiratory reduction 21 #=GS G4XDY1/388-559 DR GENE3D; 63fd313ecc50ac4c20750388cb026450/388-559; #=GS G4XDY1/388-559 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Anchonieae; Matthiola; Matthiola maderensis; #=GS A0A1J3HEY5/400-579 AC A0A1J3HEY5 #=GS A0A1J3HEY5/400-579 OS Noccaea caerulescens #=GS A0A1J3HEY5/400-579 DE Pentatricopeptide repeat-containing protein, chloroplastic #=GS A0A1J3HEY5/400-579 DR GENE3D; 67d83aff0fff37bf70801bcde8a863c7/400-579; #=GS A0A1J3HEY5/400-579 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS G4XDW8/403-577 AC G4XDW8 #=GS G4XDW8/403-577 OS Arabis hirsuta #=GS G4XDW8/403-577 DE Chlororespiratory reduction 21 #=GS G4XDW8/403-577 DR GENE3D; 786b5ca898126c74b75d8a83e465365e/403-577; #=GS G4XDW8/403-577 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis hirsuta; #=GS A0A1J3IEH1/15-183 AC A0A1J3IEH1 #=GS A0A1J3IEH1/15-183 OS Noccaea caerulescens #=GS A0A1J3IEH1/15-183 DE Pentatricopeptide repeat-containing protein, chloroplastic #=GS A0A1J3IEH1/15-183 DR GENE3D; 9ee4c1d844527c7643a7bde5d6d7b93d/15-183; #=GS A0A1J3IEH1/15-183 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS G4XDX3/407-567 AC G4XDX3 #=GS G4XDX3/407-567 OS Draba nemorosa #=GS G4XDX3/407-567 DE Chlororespiratory reduction 21 #=GS G4XDX3/407-567 DR GENE3D; cfb0b540d01f58b8c02c80a198c882e4/407-567; #=GS G4XDX3/407-567 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Draba; Draba nemorosa; #=GS R0G8N6/411-584 AC R0G8N6 #=GS R0G8N6/411-584 OS Capsella rubella #=GS R0G8N6/411-584 DE Uncharacterized protein #=GS R0G8N6/411-584 DR GENE3D; d5c0ce97b20034647a5f23d16409e866/411-584; #=GS R0G8N6/411-584 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS G4XDY3/405-570 AC G4XDY3 #=GS G4XDY3/405-570 OS Barbarea verna #=GS G4XDY3/405-570 DE Chlororespiratory reduction 21 #=GS G4XDY3/405-570 DR GENE3D; dd6a3d8bacbbcf2b80ca88ea890de9ab/405-570; #=GS G4XDY3/405-570 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Cardamineae; Barbarea; Barbarea verna; #=GS G4XDW9/211-359_396-420 AC G4XDW9 #=GS G4XDW9/211-359_396-420 OS Brassica oleracea #=GS G4XDW9/211-359_396-420 DE Chlororespiratory reduction 21 #=GS G4XDW9/211-359_396-420 DR GENE3D; cfe59405bc15fd831dcc070a5371f599/211-359_396-420; #=GS G4XDW9/211-359_396-420 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; #=GF TC 348.3 1.3E-108 #=GF SQ 15 Q9FM64/411-580 -----------VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS------ G4XDX4/390-558 ------------LASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSIILSFLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGWVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNFQHSS------ D7MKK8/405-576 -----SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNL---------- G4XDX1/400-573 -----------VLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQMQSSGITPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSSSASI-- V4NAK1/411-582 ------------LASTSVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGISPNLVSWTTMMNGLVQNGCSEEAIHFLRKMQESGLRPNVFSITVALSACANLASLHFGKSIHGYIIRNQQHSSSVA--- G4XDX8/408-583 ----------IVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIE- A0A087GBB1/410-585 -----------VLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYDMQLESVPPNVITWNSIILSLLRNGQVNEAKEMFLQMQSSDIFPNLITWTTMMKGLVQNGCSEEAIIFLRKMQESGLRPNVFSITVALSACANLASLHYGRSIHGYIIRNQQHSSSASIET G4XDY1/388-559 ------------LASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSAS--- A0A1J3HEY5/400-579 -CIRHSFESDIVLASTVVDMYAKCGSIVEAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRSGQVNEAKEMFLQMQSSGIVPNLISWTTMMNGFVQNGCSEEAILFLSKMQESGRRPNAFSITVALSACANLASLHFGRSIHGYIIRNLQHSS------ G4XDW8/403-577 -----------VLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIE- A0A1J3IEH1/15-183 ----------IVLASTVVDMYAKCGSIVEAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRSGQVNEAKEMFLQMQSSGIVPNLISWTTMMNGFVENGCSEEAILFLTKMQESGRRPNAFSITVALSACANLASLHFGRSIHGYIIRNLQH-------- G4XDX3/407-567 ------------LASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYI-------------- R0G8N6/411-584 -----------VLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQMQSSGMTPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSASI-- G4XDY3/405-570 -----------VLASTAIDMYAKCGSIVDARKAFDSIVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLESVPPNVITWNLIILSFLGNGQVNEAKEMFLQMQSSGVFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAISITVALSACAHLASLHLGRSIHGYIIRNQ---------- G4XDW9/211-359_396-420 YCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSETSLVDMYAKCGDISKAEKV---FRRKL---------- #=GC scorecons 0000000000149997568999899988798989797659999999999789987979998889996979979999799996899959877796999789799999874977789999989596999999994797999999598967778777776667776657767666757643332100000 #=GC scorecons_70 ____________****_*********************_***********************************************_*********************_************_**********_*********_***************_*****_********_**___________ #=GC scorecons_80 ____________***___*******************__***************************_****_*********_****_******_**************_************_*_********_*********_***_**_******_____*___**_*___*_*____________ #=GC scorecons_90 ____________***___**********_*****_*___**********_****_*_*********_*_**_****_****_****_**___*_***_**_******__*___********_*_********__*_******_***____*____________________________________ //