# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/145547
#=GF DE 26S proteasome regulatory subunit
#=GF AC 1.25.40.10/FF/145547
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 87.296
#=GS M0TQ12/83-240       AC M0TQ12
#=GS M0TQ12/83-240       OS Musa acuminata subsp. malaccensis
#=GS M0TQ12/83-240       DE Uncharacterized protein
#=GS M0TQ12/83-240       DR GENE3D; 262fc9448cd1db061b231eefff67d84b/83-240; 
#=GS M0TQ12/83-240       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Zingiberales; Musaceae; Musa; Musa acuminata; Musa acuminata subsp. malaccensis; 
#=GS G3ILI6/2-100        AC G3ILI6
#=GS G3ILI6/2-100        OS Cricetulus griseus
#=GS G3ILI6/2-100        DE 26S proteasome non-ATPase regulatory subunit 3
#=GS G3ILI6/2-100        DR GENE3D; 35c58388b6ac5307d0671de330308b89/2-100; 
#=GS G3ILI6/2-100        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GS A0A0L0F600/89-191   AC A0A0L0F600
#=GS A0A0L0F600/89-191   OS Sphaeroforma arctica JP610
#=GS A0A0L0F600/89-191   DE Uncharacterized protein
#=GS A0A0L0F600/89-191   DR GENE3D; 3db145afad2211896aa709715330180b/89-191; 
#=GS A0A0L0F600/89-191   DR ORG; Eukaryota; Ichthyosporea; Ichthyophonida; Sphaeroforma; Sphaeroforma arctica; 
#=GS F1C760/56-161       AC F1C760
#=GS F1C760/56-161       OS Perca flavescens
#=GS F1C760/56-161       DE 26S proteasome non-ATPase regulatory subunit 3
#=GS F1C760/56-161       DR GENE3D; 4ade8a46f6badcda40ad23bfd4164db1/56-161; 
#=GS F1C760/56-161       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Perciformes; Percoidei; Percidae; Percinae; Perca; Perca flavescens; 
#=GS A0A0S7GEF2/141-262  AC A0A0S7GEF2
#=GS A0A0S7GEF2/141-262  OS Poeciliopsis prolifica
#=GS A0A0S7GEF2/141-262  DE PSMD3
#=GS A0A0S7GEF2/141-262  DR GENE3D; 54a37d897c5c821bf54c84e4a14912c4/141-262; 
#=GS A0A0S7GEF2/141-262  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poeciliopsis; Poeciliopsis prolifica; 
#=GS H0YVL0/143-278      AC H0YVL0
#=GS H0YVL0/143-278      OS Taeniopygia guttata
#=GS H0YVL0/143-278      DE Uncharacterized protein
#=GS H0YVL0/143-278      DR GENE3D; 5c70944ed4f0a7734af6ef46cf4253e4/143-278; 
#=GS H0YVL0/143-278      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia; Taeniopygia guttata; 
#=GS A0A146YDB7/121-224  AC A0A146YDB7
#=GS A0A146YDB7/121-224  OS Fundulus heteroclitus
#=GS A0A146YDB7/121-224  DE 26S proteasome non-ATPase regulatory subunit 3
#=GS A0A146YDB7/121-224  DR GENE3D; 64aa12e555dafc6bda09ae365e4907d3/121-224; 
#=GS A0A146YDB7/121-224  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS A0A132AC73/104-249  AC A0A132AC73
#=GS A0A132AC73/104-249  OS Sarcoptes scabiei
#=GS A0A132AC73/104-249  DE 26S proteasome non-ATPase regulatory subunit 3-like protein
#=GS A0A132AC73/104-249  DR GENE3D; 683c2db20df784e153f5f04107099e59/104-249; 
#=GS A0A132AC73/104-249  DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Astigmata; Sarcoptoidea; Sarcoptidae; Sarcoptinae; Sarcoptes; Sarcoptes scabiei; 
#=GS P93768/102-231      AC P93768
#=GS P93768/102-231      OS Nicotiana tabacum
#=GS P93768/102-231      DE Probable 26S proteasome non-ATPase regulatory subunit 3
#=GS P93768/102-231      DR GENE3D; 74530120a0cffdcd806894312182a19b/102-231; 
#=GS P93768/102-231      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana; Nicotiana tabacum; 
#=GS H3CLZ4/150-257      AC H3CLZ4
#=GS H3CLZ4/150-257      OS Tetraodon nigroviridis
#=GS H3CLZ4/150-257      DE Uncharacterized protein
#=GS H3CLZ4/150-257      DR GENE3D; 855cb415231cca9e3fb2687e664c36ed/150-257; 
#=GS H3CLZ4/150-257      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Tetraodon; Tetraodon nigroviridis; 
#=GS A0A146NCU9/209-311  AC A0A146NCU9
#=GS A0A146NCU9/209-311  OS Fundulus heteroclitus
#=GS A0A146NCU9/209-311  DE 26S proteasome non-ATPase regulatory subunit 3
#=GS A0A146NCU9/209-311  DR GENE3D; 9287fa22d3fdf9fdc4557ff99c01ba8f/209-311; 
#=GS A0A146NCU9/209-311  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS G3PPJ1/152-258      AC G3PPJ1
#=GS G3PPJ1/152-258      OS Gasterosteus aculeatus
#=GS G3PPJ1/152-258      DE Uncharacterized protein
#=GS G3PPJ1/152-258      DR GENE3D; 92a81402931893ea82b6b075e7d96dca/152-258; 
#=GS G3PPJ1/152-258      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus; Gasterosteus aculeatus; 
#=GS A0A146YDB6/156-260  AC A0A146YDB6
#=GS A0A146YDB6/156-260  OS Fundulus heteroclitus
#=GS A0A146YDB6/156-260  DE 26S proteasome non-ATPase regulatory subunit 3
#=GS A0A146YDB6/156-260  DR GENE3D; a1b16e083dc18f0544ac010b060ab50e/156-260; 
#=GS A0A146YDB6/156-260  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS W5KL22/124-248      AC W5KL22
#=GS W5KL22/124-248      OS Astyanax mexicanus
#=GS W5KL22/124-248      DE Uncharacterized protein
#=GS W5KL22/124-248      DR GENE3D; b903e11d5700c73d74e6d2e1f91ab664/124-248; 
#=GS W5KL22/124-248      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Characiphysae; Characiformes; Characoidei; Characidae; Astyanax; Astyanax mexicanus; 
#=GS A0A087XVS4/159-268  AC A0A087XVS4
#=GS A0A087XVS4/159-268  OS Poecilia formosa
#=GS A0A087XVS4/159-268  DE Uncharacterized protein
#=GS A0A087XVS4/159-268  DR GENE3D; e991ac73417910a74b919219b3964265/159-268; 
#=GS A0A087XVS4/159-268  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poecilia; Poecilia formosa; 
#=GS H2N1D2/81-215       AC H2N1D2
#=GS H2N1D2/81-215       OS Oryzias latipes
#=GS H2N1D2/81-215       DE Uncharacterized protein
#=GS H2N1D2/81-215       DR GENE3D; f4f745b7dfbaf56e315e692880ae2572/81-215; 
#=GS H2N1D2/81-215       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS M4AHQ2/160-268      AC M4AHQ2
#=GS M4AHQ2/160-268      OS Xiphophorus maculatus
#=GS M4AHQ2/160-268      DE Uncharacterized protein
#=GS M4AHQ2/160-268      DR GENE3D; faa95dffcddfa465d9aa91c1c59c49e6/160-268; 
#=GS M4AHQ2/160-268      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus; Xiphophorus maculatus; 
#=GS A0A0C2GBH3/25-147   AC A0A0C2GBH3
#=GS A0A0C2GBH3/25-147   OS Ancylostoma duodenale
#=GS A0A0C2GBH3/25-147   DE Uncharacterized protein
#=GS A0A0C2GBH3/25-147   DR GENE3D; 1f9582852e9feb2870c0fe4145e2cb45/25-147; 
#=GS A0A0C2GBH3/25-147   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma duodenale; 
#=GS W2TD14/120-247      AC W2TD14
#=GS W2TD14/120-247      OS Necator americanus
#=GS W2TD14/120-247      DE Ribosomal protein L32
#=GS W2TD14/120-247      DR GENE3D; 7a92388709d5ff3e38c8ff5030d5b9d4/120-247; 
#=GS W2TD14/120-247      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator; Necator americanus; 
#=GS A0A0B1SKX5/133-248  AC A0A0B1SKX5
#=GS A0A0B1SKX5/133-248  OS Oesophagostomum dentatum
#=GS A0A0B1SKX5/133-248  DE Ribosomal protein L32
#=GS A0A0B1SKX5/133-248  DR GENE3D; 76f9ed557a5edfa1288257618fec495c/133-248; 
#=GS A0A0B1SKX5/133-248  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Strongyloidea; Cloacinidae; Oesophagostomum; Oesophagostomum dentatum; 
#=GF TC 260.3 3.5E-82
#=GF SQ 20
M0TQ12/83-240               AKLSSYLPKDDDHDMDVDTAA------SAVQGPAKHSIPELEIYCYLLVLIFLIDQKRYNEAKACSSASIARLRNMNRRTVDVIAARLYFYYSFTYELTNSLAEIRGTLLALHRMATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-AK-------
G3ILI6/2-100                ----------------------------------------------------------------------QKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYY---
A0A0L0F600/89-191           -------------------------------------------------TIFLIDAERVDDAMECSSDMVDRVAKYNRRTLDPLSARAFYYYGRAFELAGKFSEIRKPLLNALRTATLRHDKDGQATLINLLLRSYLHYSLFDQAHKLVSKS--------------------
F1C760/56-161               ----------------------------------------------LLLVVHLTNNKRYTEAQKVSDDLLQKIGSKNRRALDLVAAKCYYYHARVYEFLHQFDSMRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKS--------------------
A0A0S7GEF2/141-262          ------------------------------KAASAPLLPEVEAYLQLLLVVHLTNSKRYTEAQKVSDELMQKVSSKNRRALDLVVAKCYYYHARVYEFLNQLDTIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKS--------------------
H0YVL0/143-278              ------------------------------------LLPEVEAYLQLLLVIYLMNSKRYPEAQKVSDDLMQKISSQNRRALDLVVAKCYYYHSRIYEFLNKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYNLYDQAEKLVSKSVFPEHANNNEWARYLYYTGE
A0A146YDB7/121-224          ------------------------------------------------LVIHLTNTKRYTEAQKVSDELMQKVSSKNRRALDLVVAKCYYYHARVYEFLKQLDTIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKS--------------------
A0A132AC73/104-249          L---GYIL---NESLDTGSNAENVKQPAKSRLSITHLSPEQDVYYHLLIVVYLLDLRNYKMAIACSDALMTKICKHNRRTLDVLAAKAYYFHCRCYELNDQLNDTKSFFHSRLQTATLRNDYEGQAVLLNCLLRIYLNYNLYDQASKLVSKS--------------------
P93768/102-231              -------------------AT------SGAQAPIKNPLPELEIYCYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGDLAEIRGYLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRF-----------------
H3CLZ4/150-257              ---------------------------------------------QLLLVVHLTNTKRYTEAQKVSDDLLQKIGSKNRRALDLVAAKCYYYHARVYEFLNQFDTIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKSV-------------------
A0A146NCU9/209-311          --------------------------------------------------IHLTNTKRYTEAQKVSDELMQKVSSKNRRALDLVVAKCYYYHARVYEFLKQLDSIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKSV-------------------
G3PPJ1/152-258              ---------------------------------------------QLLLVVHLTNSKRYSEAQKVSDDLLQKIGSKNRRALDLVAAKCYYYHARVYEFLKQFDTMRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKS--------------------
A0A146YDB6/156-260          ------------------------------------------------LVIHLTNTKRYTEAQKVSDELMQKVSSKNRRALDLVVAKCYYYHARVYEFLKQLDTIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKSV-------------------
W5KL22/124-248              ---------------------------RTGKAAATPLIPEVEAYLQLLLVVYLTNNKRYNEAQKVSDNLLQKISSQNRRALDLVAAKCYYYHCRVYEFLNQLDAVRSFLHTRLRTATLRHDSDGQATLLNLLLRNYLQYNLYDQAEKLVSKS--------------------
A0A087XVS4/159-268          -------------------------------------------YLQLLLVVHLTNSKRYTEAQKVSDELMQKVSSKNRRALDLVVAKCYYYHARVYEFLNQLDTIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKSV-------------------
H2N1D2/81-215               ------------------------------KAAASPLLPEVEAYLQLLLVVHLTTNKRYAEAQRASDDLMQKISSKKSRALDLIAAKCYYHHARVYELLQQLHAIRSFLHSRLRTATLRHDADGQAVLLNLLLRNYLHFSLYDQAEKLVSKSVFPELANNNEWAR-------
M4AHQ2/160-268              --------------------------------------------LQLLLVVHLTNSKRYTEAQKVSDELMQKVSSKNRRALDLVVAKCYYYHARVYEFLNQLDTIRSFLHTRLRTATLRHDADGQAVLLNLLLRNYLHFNLYDQAEKLVSKSV-------------------
A0A0C2GBH3/25-147           ----------------------------PARKTAT-PSPESELYIHLLVLLYLVDQNKLDDAKKCAEMLISRADSVDKRSLDPLVAKGIFYLALIYERQHKLHELGCFLNSRLRTATLRRQRESQAVLIYTLLRCYLINKQFQSAAKLVSKV--------------------
W2TD14/120-247              --------------------A--LKSPRPARKAAT-TSPESELYVHLLVLLYLVDQNKLDDAKKCAEMLISRADSLDKRSLDPIVAKGIFYLALIYERQHKLHELGCFLNSRLRTATLRRQRESQAVLIYTLLRCYLINKQFQSAAKLVSK---------------------
A0A0B1SKX5/133-248          ------------------------------------ASPESELYIHLLVLLYLLDQNRLDDAKKCAEMLISRADSIDKRSLDPLVAKGIFYLALIYERQHKLHELGCFLNSRLRTATLRRQRESQAVLIYTLLRCYLINKQFQSAAKLVSKV--------------------
#=GC scorecons              0000000000000000000000000000001001001122121312554455745356535745465355475453779579565874678555589444574456568556787999967457976976699959955567769599799510000000000000000000
#=GC scorecons_70           ____________________________________________________*________*_________*____***_**___**_***____**____*___*_**__**********__***_***_***_**___*****_*****_____________________
#=GC scorecons_80           ____________________________________________________*________*_________*_____**_**___**__**____**____*______*___*******____***_*___***_**____*__*_**_**_____________________
#=GC scorecons_90           ______________________________________________________________________________*__*___*____*____**___________*____*_****_____*__*___***_**_______*_**_**_____________________
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