# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/144873
#=GF DE Intraflagellar transport protein 140
#=GF AC 1.25.40.10/FF/144873
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 30.638
#=GS Q91VU5/129-300   AC Q91VU5
#=GS Q91VU5/129-300   OS Mus musculus
#=GS Q91VU5/129-300   DE Ift140 protein
#=GS Q91VU5/129-300   DR GENE3D; 8ebe95f07e9365ab610668c402e4c6aa/129-300; 
#=GS Q91VU5/129-300   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q91VU5/129-300   DR GO; GO:0001750; GO:0005813; GO:0005929; GO:0005930; GO:0007368; GO:0007507; GO:0008589; GO:0021532; GO:0030991; GO:0031076; GO:0032391; GO:0035108; GO:0035721; GO:0035845; GO:0036064; GO:0042073; GO:0042733; GO:0048701; GO:0048705; GO:0060041; GO:0060271; GO:0061512; GO:0072001; GO:0097542; GO:0097730; GO:1902017; GO:1905515; GO:1990403; 
#=GS E9Q682/989-1159  AC E9Q682
#=GS E9Q682/989-1159  OS Mus musculus
#=GS E9Q682/989-1159  DE Intraflagellar transport 140
#=GS E9Q682/989-1159  DR GENE3D; 69b9fb7c136da6161e5b4dac3bf7f6c4/989-1159; 
#=GS E9Q682/989-1159  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS E9Q682/989-1159  DR GO; GO:0001750; GO:0005813; GO:0005929; GO:0005930; GO:0007368; GO:0007507; GO:0008589; GO:0021532; GO:0030991; GO:0031076; GO:0032391; GO:0035108; GO:0035721; GO:0035845; GO:0036064; GO:0042073; GO:0042733; GO:0048701; GO:0048705; GO:0060041; GO:0060271; GO:0061512; GO:0072001; GO:0097730; GO:1902017; GO:1905515; GO:1990403; 
#=GS B3KNW3/154-368   AC B3KNW3
#=GS B3KNW3/154-368   OS Homo sapiens
#=GS B3KNW3/154-368   DE cDNA FLJ30571 fis, clone BRAWH2006044, highly similar to Intraflagellar transport 140 homolog
#=GS B3KNW3/154-368   DR GENE3D; 52d7dbab371ea6f964aa354a09bd35f5/154-368; 
#=GS B3KNW3/154-368   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS G3WB06/985-1160  AC G3WB06
#=GS G3WB06/985-1160  OS Sarcophilus harrisii
#=GS G3WB06/985-1160  DE Uncharacterized protein
#=GS G3WB06/985-1160  DR GENE3D; a77408c007d1865384c1e9bc11667325/985-1160; 
#=GS G3WB06/985-1160  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Dasyuromorphia; Dasyuridae; Sarcophilus; Sarcophilus harrisii; 
#=GS G3WB05/991-1166  AC G3WB05
#=GS G3WB05/991-1166  OS Sarcophilus harrisii
#=GS G3WB05/991-1166  DE Uncharacterized protein
#=GS G3WB05/991-1166  DR GENE3D; 9eccb740724c5cb948e9baaba0038d30/991-1166; 
#=GS G3WB05/991-1166  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Dasyuromorphia; Dasyuridae; Sarcophilus; Sarcophilus harrisii; 
#=GS H2QAA4/944-1152  AC H2QAA4
#=GS H2QAA4/944-1152  OS Pan troglodytes
#=GS H2QAA4/944-1152  DE Uncharacterized protein
#=GS H2QAA4/944-1152  DR GENE3D; 92477cbda89a6cd4785a085a38b159fd/944-1152; 
#=GS H2QAA4/944-1152  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS G3HBX9/994-1162  AC G3HBX9
#=GS G3HBX9/994-1162  OS Cricetulus griseus
#=GS G3HBX9/994-1162  DE Intraflagellar transport protein 140-like
#=GS G3HBX9/994-1162  DR GENE3D; 69b89e7535dcbb74e5bf696b50dd9e93/994-1162; 
#=GS G3HBX9/994-1162  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GS F1LY69/995-1167  AC F1LY69
#=GS F1LY69/995-1167  OS Rattus norvegicus
#=GS F1LY69/995-1167  DE Intraflagellar transport 140
#=GS F1LY69/995-1167  DR GENE3D; 1e30b8b9eacad58889f7e53c7306c93e/995-1167; 
#=GS F1LY69/995-1167  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS H0V0K3/991-1161  AC H0V0K3
#=GS H0V0K3/991-1161  OS Cavia porcellus
#=GS H0V0K3/991-1161  DE Uncharacterized protein
#=GS H0V0K3/991-1161  DR GENE3D; 103f5ae445e0b188e3cd39ac95825400/991-1161; 
#=GS H0V0K3/991-1161  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Caviidae; Cavia; Cavia porcellus; 
#=GF TC 2.4 6.9E-02
#=GF SQ 9
Q91VU5/129-300           ------------------------------------------SLVRIHCFQGNIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFNNAIRLCKENSLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLARCSDFCIEHRQFEKAVELLLAAKKYHEALQ---------
E9Q682/989-1159          --------------------------------------------VRIHCFQGNIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLARCSDFCIEHRQFEKAVELLLAAKKYHEALQL--------
B3KNW3/154-368           SLELYVNKMKDKTLWRWWAQYLESQGEMDAALHYYELARDHFSLVRIHCFQGNVQKAAQIANETGNLAASYHLARQYESQEEVGQAVHFYTRAQAFKNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGVQMDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDETSDPALLARCSDFFIEHSQYERAVELLLAARKYQEALQL--------
G3WB06/985-1160          ---------------------------------------DYFSLVRIYCFQGNIQKAAEIANETGNWAASYHLARQYESQEEIKQAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDEKSDPALLARCSDFFIEHSQYEKAVELLLAAKKYQDALQL--------
G3WB05/991-1166          ---------------------------------------DYFSLVRIYCFQGNIQKAAEIANETGNWAASYHLARQYESQEEIKQAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDEKSDPALLARCSDFFIEHSQYEKAVELLLAAKKYQDALQL--------
H2QAA4/944-1152          SLELYVNKMKDKTLWRWWAQYLESQGEMDAALHYYELARDHFSLVRIHCFQGNVQKAAQIANETGNLAASYHLARQYESQEEVGQAVHFYTRAQAFKNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGVQMDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDETSDPALLARCSDFFIEHSQYERAVELLLAARKY--------------
G3HBX9/994-1162          --------------------------------------------------QGNIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLSRCSDFCIEHRQFEKAVELLLAAKKYHEALQLCLEQ----
F1LY69/995-1167          --------------------------------------------------QGNIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLARCSDFCIEHRQFEKAVELLLAAKKYHEALQLCLEQNMTI
H0V0K3/991-1161          --------------------------------------------VRIHCFQGNISKASEIANETGNWAASYHLARQYESQEDVKQAVLFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGDQMDRAVMLYHKAGHFSKALELAFATQQFAALQLIAEDLDEKSDPALLSRCSDFCIEHKQFEKAMELLLAAKKYHEALQL--------
#=GC scorecons           0000000000000000000000000000000000000002122255545599977997699999965999999999999978759997999999996999999999699999999999999999999999999994999999999999999999999996999959999999999959999997999995999497979899999979944555400000000
#=GC scorecons_70        __________________________________________________****************_****************_************_**************************************_****************************_***********_************_***_***************______________
#=GC scorecons_80        __________________________________________________***_****_******__*************_**_************_*********_****************************_***********************_****_***********_******_*****_***_***_********_**______________
#=GC scorecons_90        __________________________________________________***__**__******__*************_*__***_********_*********_****************************_***********************_****_***********_******_*****_***_*_*_*_******_**______________
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