# STOCKHOLM 1.0
#=GF ID 1.25.10.10/FF/69224
#=GF DE U-box domain-containing protein 39
#=GF AC 1.25.10.10/FF/69224
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 42.044
#=GS A0A1J3DM98/239-529  AC A0A1J3DM98
#=GS A0A1J3DM98/239-529  OS Noccaea caerulescens
#=GS A0A1J3DM98/239-529  DE RING-type E3 ubiquitin transferase
#=GS A0A1J3DM98/239-529  DR GENE3D; 4a24e51c66e9ea6b4cce0f561b26eb8e/239-529; 
#=GS A0A1J3DM98/239-529  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A1J3DM98/239-529  DR EC; 2.3.2.27; 
#=GS A0A087GW31/208-504  AC A0A087GW31
#=GS A0A087GW31/208-504  OS Arabis alpina
#=GS A0A087GW31/208-504  DE RING-type E3 ubiquitin transferase
#=GS A0A087GW31/208-504  DR GENE3D; 4f2b24c5ebe1801c7009e2305b83f1f4/208-504; 
#=GS A0A087GW31/208-504  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A087GW31/208-504  DR EC; 2.3.2.27; 
#=GS D7MMC1/354-523      AC D7MMC1
#=GS D7MMC1/354-523      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MMC1/354-523      DE RING-type E3 ubiquitin transferase
#=GS D7MMC1/354-523      DR GENE3D; 749d9a534fd89b82b63a1303a6207418/354-523; 
#=GS D7MMC1/354-523      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS D7MMC1/354-523      DR EC; 2.3.2.27; 
#=GS A0A078H1Q0/307-473  AC A0A078H1Q0
#=GS A0A078H1Q0/307-473  OS Brassica napus
#=GS A0A078H1Q0/307-473  DE RING-type E3 ubiquitin transferase
#=GS A0A078H1Q0/307-473  DR GENE3D; 8a463d2f7636c0ae7b4f71fbc6889596/307-473; 
#=GS A0A078H1Q0/307-473  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078H1Q0/307-473  DR EC; 2.3.2.27; 
#=GS M4F490/352-513      AC M4F490
#=GS M4F490/352-513      OS Brassica rapa subsp. pekinensis
#=GS M4F490/352-513      DE RING-type E3 ubiquitin transferase
#=GS M4F490/352-513      DR GENE3D; 9b85a602d6075fe767efd104ae2fa81a/352-513; 
#=GS M4F490/352-513      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS M4F490/352-513      DR EC; 2.3.2.27; 
#=GS V4K1A1/359-519      AC V4K1A1
#=GS V4K1A1/359-519      OS Eutrema salsugineum
#=GS V4K1A1/359-519      DE RING-type E3 ubiquitin transferase
#=GS V4K1A1/359-519      DR GENE3D; bd558812d3e141598ffe5986ec8c8042/359-519; 
#=GS V4K1A1/359-519      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS V4K1A1/359-519      DR EC; 2.3.2.27; 
#=GS A0A078FQM0/351-516  AC A0A078FQM0
#=GS A0A078FQM0/351-516  OS Brassica napus
#=GS A0A078FQM0/351-516  DE RING-type E3 ubiquitin transferase
#=GS A0A078FQM0/351-516  DR GENE3D; c25cd4822d819261973b04e30fb2603b/351-516; 
#=GS A0A078FQM0/351-516  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078FQM0/351-516  DR EC; 2.3.2.27; 
#=GS A0A078DDA1/357-516  AC A0A078DDA1
#=GS A0A078DDA1/357-516  OS Brassica napus
#=GS A0A078DDA1/357-516  DE RING-type E3 ubiquitin transferase
#=GS A0A078DDA1/357-516  DR GENE3D; f0ba722a336f16c3871ea2be954feb19/357-516; 
#=GS A0A078DDA1/357-516  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078DDA1/357-516  DR EC; 2.3.2.27; 
#=GS A0A087GDN3/242-519  AC A0A087GDN3
#=GS A0A087GDN3/242-519  OS Arabis alpina
#=GS A0A087GDN3/242-519  DE RING-type E3 ubiquitin transferase
#=GS A0A087GDN3/242-519  DR GENE3D; f5d4b60203f704ce210828e8c453d935/242-519; 
#=GS A0A087GDN3/242-519  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A087GDN3/242-519  DR EC; 2.3.2.27; 
#=GF TC 338.5 1.7E-105
#=GF SQ 9
A0A1J3DM98/239-529          EEIYNKLKGVDIFDHEQGLIQLRKMTRSGEDLRISLCTDRILSFLRTFLVSRYNLVQTNAAASLVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESDRARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSVESSSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLRE-----GGDDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLKEVEE--SGNGRVKEKAAKILLAMGGGGGGGESEFGENAE---
A0A087GW31/208-504          EEIHNKLRSGDTIDHEQGLILLRKTTRSSENSRISLCTDRILSFLRTFIVSRYNIVQTNAAASLVNLSLEKQNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSDSERARQDAALALYHLSLIPNNRTRLVRAGAVPMMLSMVRSGESASRILLLLCNLAACSEGKGAMLDGNAVGILFGKLREGGGGGGGGDTEAARENCVGALLTLSIGNMRFRGLASEAGAEEILNEIVERVEGSGRLKEKAAKILQAMRGGE----REFGEGAEARE
D7MMC1/354-523              -------------------------------------------------------------------------------------------------------------------MVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLRE----VGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEK--NGNERVKEKASKILQAMRGGG-GGESE---------
A0A078H1Q0/307-473          --------------------------------------------------------------------------------------------------------------------VIGVLGAVEPLLHALRASESERARQDAALALYHLSLIPSNRTRLVRAGAVATLLTMVRSGESTSRMLLVLCNLAACPDGKGAMLDGNAVAILVGKLRE-----GGED-EAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLKEVEE--SGNGRVKEKAGKILQAMRGGG--GESEY--------
M4F490/352-513              -------------------------------------------------------------------------------------------------------------------MVIGVLGAVEPLLHALRSSDSERARQDASLALYHLSLVPSNRTRLVRAGAVATLLSMVRSGESTSRILLVLCNLAACPDGKGAMLEGNAVAILVGKLRE----GGGEDSEAARENCVAVLLTLCQGNLRFRGLASEVGAEEVLKEVEE--RGNGRVKENAAKILQVMR------------------
V4K1A1/359-519              -------------------------------------------------------------------------------------------------------------------------GAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGESTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLRE-----DGDDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLKEVEE--SGNGRVKEKAAKILQAMRGGGDGG------------
A0A078FQM0/351-516          -------------------------------------------------------------------------------------------------------------------MVIGVLGAVEPLLHALRSSDSERARQDAALALYHLSLVPSNRTRLVRAGAVATLLSMVRSGESTSRILLVLCNLAACPDGKGAMLEGNAVAILVGKLRE----GGGDDSEAARENCVAVLLTLCQGNLRFRGLASEVGAEEVLKEVEE--RGNGRVKENAAKILQVMRGGG--G------------
A0A078DDA1/357-516          --------------------------------------------------------------------------------------------------------------------VIGVLGAVEPLLHALRSSESERARQDAALALYHLSLVPSNRTRLVRAGAVATLLSLVMSGESTSRILLVLCNLAACPDGKGAMLEGNAVAILVGKLRE----GGGDDSEAARENCVAVLLTLCQGNLRFRGLASEVGTEEVLKGVEE--SGNGRAKENAAKILQVM-------------------
A0A087GDN3/242-519          EEIYNKLKGTDIFDHEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASLVNLSLEKQNKVKIVRSGFVALLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGESTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLRE-----GGDDSEAARENCVSVLLTLCQGNLRFRGLASEAGAEEVLKEVEE--KSNGRVKEKAGKILQAIRGG----------------
#=GC scorecons              1111111100100111111101110111010011111111111111000111110111111111111111111101111111101111111110111111101111111011111477777999999999997979799999989999999979799999999999677978979689699899799999997799999979999799799999000017959599999999679999769979999999969899796776700377796996969996675552002011000000000
#=GC scorecons_70           ____________________________________________________________________________________________________________________**************************************************_***********_***********************************_____**_*_********_*************************_****___*********_******___________________
#=GC scorecons_80           ____________________________________________________________________________________________________________________******************_*******************************__*******_**_*****************************_*****_____**_*_********_******_***********_******_**_*___****_**_*_***__*___________________
#=GC scorecons_90           _________________________________________________________________________________________________________________________***********_*_*_******_********_*_***********___*_**_*_**_*****_*******__******_****_**_*****______*_*_********__****__**_********_*_**_*___________*_**_*_***______________________
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