# STOCKHOLM 1.0 #=GF ID 1.20.960.20/FF/161 #=GF DE Genome polyprotein #=GF AC 1.20.960.20/FF/161 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 19.587 #=GS P08617/2139-2221 AC P08617 #=GS P08617/2139-2221 OS Human hepatitis A virus Hu/Australia/HM175/1976 #=GS P08617/2139-2221 DE Genome polyprotein #=GS P08617/2139-2221 DR GENE3D; 0115f5267829b8de3efcbef105e55a25/2139-2221; #=GS P08617/2139-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS P08617/2139-2221 DR GO; GO:0039546; #=GS P08617/2139-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q5Y944/2137-2219 AC Q5Y944 #=GS Q5Y944/2137-2219 OS Human hepatitis A virus Hu/France/CF-53/1979 #=GS Q5Y944/2137-2219 DE Genome polyprotein #=GS Q5Y944/2137-2219 DR GENE3D; 014178f8766eb353ef33d6c961366bfd/2137-2219; #=GS Q5Y944/2137-2219 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS Q5Y944/2137-2219 DR GO; GO:0039546; #=GS Q5Y944/2137-2219 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P14553/2142-2224 AC P14553 #=GS P14553/2142-2224 OS Simian hepatitis A virus Cercopithecus/Kenya/AGM-27/1985 #=GS P14553/2142-2224 DE Genome polyprotein #=GS P14553/2142-2224 DR GENE3D; 3a1a98f73d558013c326cb5de8e6568b/2142-2224; #=GS P14553/2142-2224 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS P14553/2142-2224 DR GO; GO:0039546; #=GS P14553/2142-2224 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q8V0N6/2139-2221 AC Q8V0N6 #=GS Q8V0N6/2139-2221 OS Human hepatitis A virus Hu/Sierra Leone/SLF88/1988 #=GS Q8V0N6/2139-2221 DE Genome polyprotein #=GS Q8V0N6/2139-2221 DR GENE3D; 778a132f924c67e3235ffcb122d29bdc/2139-2221; #=GS Q8V0N6/2139-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS Q8V0N6/2139-2221 DR GO; GO:0039546; #=GS Q8V0N6/2139-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q67825/2139-2221 AC Q67825 #=GS Q67825/2139-2221 OS Human hepatitis A virus Hu/Germany/GBM/1976 #=GS Q67825/2139-2221 DE Genome polyprotein #=GS Q67825/2139-2221 DR GENE3D; 96b4392fc10252f9b16b48c056ec2dbb/2139-2221; #=GS Q67825/2139-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS Q67825/2139-2221 DR GO; GO:0039546; #=GS Q67825/2139-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS A3FMB2/2139-2221 AC A3FMB2 #=GS A3FMB2/2139-2221 OS Human hepatitis A virus Hu/China/H2/1982 #=GS A3FMB2/2139-2221 DE Genome polyprotein #=GS A3FMB2/2139-2221 DR GENE3D; ad1a732c8df1000f64e164ffc581a10f/2139-2221; #=GS A3FMB2/2139-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS A3FMB2/2139-2221 DR GO; GO:0039546; #=GS A3FMB2/2139-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS A5LGW7/2140-2221 AC A5LGW7 #=GS A5LGW7/2140-2221 OS Human hepatitis A virus Hu/Japan/HAJ85-1/1985 #=GS A5LGW7/2140-2221 DE Genome polyprotein #=GS A5LGW7/2140-2221 DR GENE3D; b072621c6d429f658c00c1437ab00fe5/2140-2221; #=GS A5LGW7/2140-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS A5LGW7/2140-2221 DR GO; GO:0039546; #=GS A5LGW7/2140-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P13901/2139-2221 AC P13901 #=GS P13901/2139-2221 OS Human hepatitis A virus Hu/Northern Africa/MBB/1978 #=GS P13901/2139-2221 DE Genome polyprotein #=GS P13901/2139-2221 DR GENE3D; cabb87b6feabfb5ba0ecf5eaa74d8bc3/2139-2221; #=GS P13901/2139-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS P13901/2139-2221 DR GO; GO:0039546; #=GS P13901/2139-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P06441/2139-2221 AC P06441 #=GS P06441/2139-2221 OS Human hepatitis A virus Hu/Los Angelos/LA/1975 #=GS P06441/2139-2221 DE Genome polyprotein #=GS P06441/2139-2221 DR GENE3D; ff463918cc23f8bbd0ac1937491598ca/2139-2221; #=GS P06441/2139-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS P06441/2139-2221 DR GO; GO:0039546; #=GS P06441/2139-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q05794/1973-2052 AC Q05794 #=GS Q05794/1973-2052 OS Human hepatitis A virus Hu/Arizona/HAS-15/1979 #=GS Q05794/1973-2052 DE Genome polyprotein #=GS Q05794/1973-2052 DR GENE3D; 2f9d32bffd1d38e85d40057ccec0dc77/1973-2052; #=GS Q05794/1973-2052 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS Q05794/1973-2052 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q9DWR1/2140-2221 AC Q9DWR1 #=GS Q9DWR1/2140-2221 OS Human hepatitis A virus Hu/Norway/NOR-21/1998 #=GS Q9DWR1/2140-2221 DE Genome polyprotein #=GS Q9DWR1/2140-2221 DR GENE3D; 455438899782687e3eab06073e418b83/2140-2221; #=GS Q9DWR1/2140-2221 DR ORG; Viruses; Picornavirales; Picornaviridae; Hepatovirus; Hepatovirus A; #=GS Q9DWR1/2140-2221 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GF TC 190.6 1.9E-60 #=GF SQ 11 P08617/2139-2221 FNLVEDRIRPAISEKTIWSLIAWQRSNAEFEQNLENAQWFAFMHGYEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC Q5Y944/2137-2219 FNLVEDRIRPAISEKTIWSLVAWQRSNAEFEQNLENAQWFAFMHGFEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC P14553/2142-2224 FNLVEDRIRPAISEKTIWSLVAWQRSNAEFEQNLENAQWFAFMHGFEFYQKFYHFVQSCLEKEMVEYRLKSYDWWRMKFYDQC Q8V0N6/2139-2221 FNLVEDRVRPAISEKTIWSLVAWQRSNAEFEQNLENAQWFAFMHGFEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC Q67825/2139-2221 FNLVEDRIRPAISEKTIWSLIAWQRGNAEFEQNLENAQWFAFMHGYEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC A3FMB2/2139-2221 FNLVEDRIRPAISEKTIWSLIAWQRSNAEFEQNLENAQWFAFMHGYEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC A5LGW7/2140-2221 FNLVDDRIRPAIAEKTIWSLVAWQRSNAEFEQNLENAQWFAFMHGYEFYQDFYHFVQSCLEKEMIEYRLKSYDWWRMKFNDQ- P13901/2139-2221 FNLVEDRIRPAISEKTIWSLIAWQRSNAEFEQNLENAQWFAFMHGYEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC P06441/2139-2221 FNLVEDRIRPAISEKTIWSLMAWQRSNAEFEQNLENAQWFAFMHGYEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFYDQC Q05794/1973-2052 FNLVEDRIRPAISEKTIWSLIAWQRSNAEFEQNLENAQWFAFMHGYEFYQKFYYFVQSCLEKEMIEYRLKSYDWWRMRFY--- Q9DWR1/2140-2221 FNLVEDRIRPAIAEKTIWSLVAWQRNNAEFEQNLENAQWFAFMHGYEFYQQFYHFVQSCLEKEMIEYRLKSYDWWRMKFNDQ- #=GC scorecons 99997998999969999999699996999999999999999999979999699799999999998999999999999795662 #=GC scorecons_70 **************************************************_****************************_**_ #=GC scorecons_80 ************_*******_****_************************_**_***********************_*____ #=GC scorecons_90 ****_*******_*******_****_*******************_****_**_***********************_*____ //