# STOCKHOLM 1.0 #=GF ID 1.20.5.170/FF/18306 #=GF DE Intermediate filament protein ifb-2 #=GF AC 1.20.5.170/FF/18306 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 90.742 #=GS Q19286/308-388 AC Q19286 #=GS Q19286/308-388 OS Caenorhabditis elegans #=GS Q19286/308-388 DE Intermediate filament protein ifb-2 #=GS Q19286/308-388 DR GENE3D; 6efe723f5a186c9bfcef9524142917ec/308-388; #=GS Q19286/308-388 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q19286/308-388 DR GO; GO:0005515; GO:0045179; GO:1990357; #=GS M1Z854/308-388 AC M1Z854 #=GS M1Z854/308-388 OS Caenorhabditis elegans #=GS M1Z854/308-388 DE Intermediate Filament, B #=GS M1Z854/308-388 DR GENE3D; 0e971327ba612c74f69708a7d3b35451/308-388; #=GS M1Z854/308-388 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS O45168/305-381 AC O45168 #=GS O45168/305-381 OS Caenorhabditis elegans #=GS O45168/305-381 DE Intermediate filament protein ifc-1 #=GS O45168/305-381 DR GENE3D; 2ac7c734cb29085a82f4f39614f7fd6a/305-381; #=GS O45168/305-381 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q86DC6/331-405 AC Q86DC6 #=GS Q86DC6/331-405 OS Caenorhabditis elegans #=GS Q86DC6/331-405 DE Intermediate filament protein ifd-1 #=GS Q86DC6/331-405 DR GENE3D; 4e1c04465dccf773dfbe9b6b5a33cec7/331-405; #=GS Q86DC6/331-405 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q09501/280-369 AC Q09501 #=GS Q09501/280-369 OS Caenorhabditis elegans #=GS Q09501/280-369 DE Intermediate filament protein ifp-1 #=GS Q09501/280-369 DR GENE3D; 7accedd4c4c0042d881ce1b2f50b1755/280-369; #=GS Q09501/280-369 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS G0PLR8/307-386 AC G0PLR8 #=GS G0PLR8/307-386 OS Caenorhabditis brenneri #=GS G0PLR8/307-386 DE Putative uncharacterized protein #=GS G0PLR8/307-386 DR GENE3D; 1a071e7f1fd424441215bc384a15ab57/307-386; #=GS G0PLR8/307-386 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS H8WH90/307-383 AC H8WH90 #=GS H8WH90/307-383 OS Caenorhabditis briggsae #=GS H8WH90/307-383 DE Protein CBR-IFB-2, isoform b #=GS H8WH90/307-383 DR GENE3D; 63806cf90580d5c49a90c171dbacb1d8/307-383; #=GS H8WH90/307-383 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS K7GTT6/308-386 AC K7GTT6 #=GS K7GTT6/308-386 OS Caenorhabditis japonica #=GS K7GTT6/308-386 DE Uncharacterized protein #=GS K7GTT6/308-386 DR GENE3D; 78e7e321844e5e9c7896071ee375a472/308-386; #=GS K7GTT6/308-386 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS E3M4V5/306-386 AC E3M4V5 #=GS E3M4V5/306-386 OS Caenorhabditis remanei #=GS E3M4V5/306-386 DE CRE-IFB-2 protein #=GS E3M4V5/306-386 DR GENE3D; 7fe70763f9cbef33276f18ffcf466278/306-386; #=GS E3M4V5/306-386 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS H8WH89/306-386 AC H8WH89 #=GS H8WH89/306-386 OS Caenorhabditis briggsae #=GS H8WH89/306-386 DE Protein CBR-IFB-2, isoform a #=GS H8WH89/306-386 DR GENE3D; b28404ccebb4fadb7fa1583791714bda/306-386; #=GS H8WH89/306-386 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS K7GTT5/308-382 AC K7GTT5 #=GS K7GTT5/308-382 OS Caenorhabditis japonica #=GS K7GTT5/308-382 DE Uncharacterized protein #=GS K7GTT5/308-382 DR GENE3D; c58174acc1826e516fab45049af05782/308-382; #=GS K7GTT5/308-382 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A8X2A5/320-398 AC A8X2A5 #=GS A8X2A5/320-398 OS Caenorhabditis briggsae #=GS A8X2A5/320-398 DE Protein CBR-IFC-1 #=GS A8X2A5/320-398 DR GENE3D; e05981ad3819ab163f7ab7682bb6c991/320-398; #=GS A8X2A5/320-398 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS G0NAS7/307-383 AC G0NAS7 #=GS G0NAS7/307-383 OS Caenorhabditis brenneri #=GS G0NAS7/307-383 DE Putative uncharacterized protein #=GS G0NAS7/307-383 DR GENE3D; f7f47327dfb25271da1140afaf437b6e/307-383; #=GS G0NAS7/307-383 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A1D5RMX2/312-385 AC A0A1D5RMX2 #=GS A0A1D5RMX2/312-385 OS Caenorhabditis japonica #=GS A0A1D5RMX2/312-385 DE Uncharacterized protein #=GS A0A1D5RMX2/312-385 DR GENE3D; 1ff6b5157ace233ffd96edb7c4d8e8ec/312-385; #=GS A0A1D5RMX2/312-385 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS G0NFF5/334-408 AC G0NFF5 #=GS G0NFF5/334-408 OS Caenorhabditis brenneri #=GS G0NFF5/334-408 DE Putative uncharacterized protein #=GS G0NFF5/334-408 DR GENE3D; e6ac015a7523dddcc4fe148f64bb66a9/334-408; #=GS G0NFF5/334-408 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS Q5WN60/339-395 AC Q5WN60 #=GS Q5WN60/339-395 OS Caenorhabditis briggsae #=GS Q5WN60/339-395 DE Intermediate filament protein ifc-2 #=GS Q5WN60/339-395 DR GENE3D; 94ea45f8b697e61491e917e08a58e1a1/339-395; #=GS Q5WN60/339-395 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS E3MB64/326-402 AC E3MB64 #=GS E3MB64/326-402 OS Caenorhabditis remanei #=GS E3MB64/326-402 DE CRE-IFC-1 protein #=GS E3MB64/326-402 DR GENE3D; b0bf26835db947cae17e14efd7b0bd48/326-402; #=GS E3MB64/326-402 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS G0M8Z2/321-399 AC G0M8Z2 #=GS G0M8Z2/321-399 OS Caenorhabditis brenneri #=GS G0M8Z2/321-399 DE CBN-IFC-1 protein #=GS G0M8Z2/321-399 DR GENE3D; 23f5d32202d9b018ba9e57ed2db1c4ae/321-399; #=GS G0M8Z2/321-399 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS G0PG41/321-399 AC G0PG41 #=GS G0PG41/321-399 OS Caenorhabditis brenneri #=GS G0PG41/321-399 DE Putative uncharacterized protein #=GS G0PG41/321-399 DR GENE3D; ac76da37ad1c9183aa8734412a5f352f/321-399; #=GS G0PG41/321-399 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS E3LVL5/350-423 AC E3LVL5 #=GS E3LVL5/350-423 OS Caenorhabditis remanei #=GS E3LVL5/350-423 DE CRE-LMN-1 protein #=GS E3LVL5/350-423 DR GENE3D; bad6d7ec9e52a1d9ddfba9e6aa6a2628/350-423; #=GS E3LVL5/350-423 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GF TC 80.7 7.8E-26 #=GF SQ 20 Q19286/308-388 -----------SELEARNSALEREANTLQIQLGEDQRAYESELHKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRF M1Z854/308-388 -----------SELEARNSALEREANTLQIQLGEDQRAYESELHKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRF O45168/305-381 -------------IESRNAWLLTTITDLKHQQAEEARIFEATLDAKQATYEQFKERCTELSIQMEKLCDHETSLQAELERYRVLLNGANV-- Q86DC6/331-405 ----------------MTQALSKRIEDMKFREDEELRMFEQSLTEKELAVTRMRDECAKLSVELETLVENQINLRSEIAHYRKLMEQAENL- Q09501/280-369 KNNLSGLQKQVSEVEIRNNSLTQQIEFYRLEISENNKLFEDTLEFKIKEIEKMREQCTAISVELEKLCDLNIDLQKEIAKYRELLDRSGD-- G0PLR8/307-386 ------------ELEARNAALEREANNLQIQLGEDQRAYESELVKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRF H8WH90/307-383 ------------ELEARNAALEREANTLQIQLGEDQRAYESELVKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEE--- K7GTT6/308-386 -------------LEARNAALEREANSLQIQLGEDQRSYESELVKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRF E3M4V5/306-386 -----------SELEARNAALEREANTLQIQLGEDQRAYESELAKRDSALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRF H8WH89/306-386 -----------SELEARNAALEREANTLQIQLGEDQRAYESELVKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRF K7GTT5/308-382 -------------LEARNAALEREANSLQIQLGEDQRSYESELVKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESE---- A8X2A5/320-398 -----------AEIECRNTMLASTITDLRHQQTEEARIFEAVLAEKDAQNAKLRERCTEISIQMEKLCDHEVSLQAELERYRVLLNGANV-- G0NAS7/307-383 ------------ELEARNAALEREANNLQIQLGEDQRAYESELVKRDNALRFMREDCQTLIAELQALLNTKQTLDTEIAIYRKLVESEE--- A0A1D5RMX2/312-385 ---------------SGNSAL---IERLRAELDTLKRSFQEKLDDKDARIAELNQEIERMMSEFHDLLDVKIQLDAELKTYQVLLEGEEERL G0NFF5/334-408 ----------------VSQQLIKRIEDMKFREEEELKMFEQALTEKQFAVDRMRDECTKLSVELEKLMENQINLRKEIDYYRKLMESAENL- Q5WN60/339-395 ------------------------------RNNEESKLYEISLAEKDAQIARLREQCTELSIQMERLCDNEISLRAEIERYRVLLNG----- E3MB64/326-402 -------------IESRNSLLSSTIMDLKHQQSEEARIFEAILAEKDAQNANLRERCTEISIQMEKLCDHETSLQVELERYRTLLNGANV-- G0M8Z2/321-399 -----------AEIECRNTMLVSTITDLKHQQSEEARIFEAILAEKDAQNAKLRERCTEISIQMEKLCDHEVSLQAELERYRTLLNGANV-- G0PG41/321-399 -----------AEIECRNTMLVSTITDLKHQQSEEARIFEAILAEKDAQNAKLRERCTEISIQMEKLCDHEVSLQAELERYRTLLNGANV-- E3LVL5/350-423 ---------------SGNASL---IERLRSELETLKRSFQEKLDDKDARISELNQEIERMMSEFHDLLDVKIQLDSELKTYQALLEGEEERL #=GC scorecons 00000000000022435643723254365364475374774393476444436774744654665494645449549643974966544210 #=GC scorecons_70 _________________*__*____________*__*_**__*__**_____***_*__*__*___*______*__**__**_*________ #=GC scorecons_80 ____________________*____________*__*_**__*__*_______*__*_________*______*__*___**_*________ #=GC scorecons_90 __________________________________________*_______________________*______*__*___*__*________ //