# STOCKHOLM 1.0
#=GF ID 1.20.1060.10/FF/2085
#=GF DE DNA polymerase theta
#=GF AC 1.20.1060.10/FF/2085
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 56.201
#=GS Q8ILY1/1643-1755  AC Q8ILY1
#=GS Q8ILY1/1643-1755  OS Plasmodium falciparum 3D7
#=GS Q8ILY1/1643-1755  DE Pfprex
#=GS Q8ILY1/1643-1755  DR GENE3D; 7a386160af44ef84b27cca3e7814ec11/1643-1755; 
#=GS Q8ILY1/1643-1755  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8ILY1/1643-1755  DR GO; GO:0003678; GO:0003887; GO:0003896; GO:0005515; GO:0008408; GO:0020011; 
#=GS Q8ILY1/1643-1755  DR EC; 2.7.7.7; 
#=GS O18475/1667-1771  AC O18475
#=GS O18475/1667-1771  OS Drosophila melanogaster
#=GS O18475/1667-1771  DE DNA polymerase theta
#=GS O18475/1667-1771  DR GENE3D; 9e6de5bb6a06c35e59406a951e85aeb4/1667-1771; 
#=GS O18475/1667-1771  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS O18475/1667-1771  DR GO; GO:0004386; GO:0006281; GO:0006289; GO:0097681; 
#=GS O18475/1667-1771  DR EC; 2.7.7.7; 
#=GS W7JZR9/1643-1755  AC W7JZR9
#=GS W7JZR9/1643-1755  OS Plasmodium falciparum NF54
#=GS W7JZR9/1643-1755  DE Uncharacterized protein
#=GS W7JZR9/1643-1755  DR GENE3D; 7a386160af44ef84b27cca3e7814ec11/1643-1755; 
#=GS W7JZR9/1643-1755  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JZR9/1643-1755  DR EC; 2.7.7.7; 
#=GS B4HGF6/1615-1719  AC B4HGF6
#=GS B4HGF6/1615-1719  OS Drosophila sechellia
#=GS B4HGF6/1615-1719  DE GM25985
#=GS B4HGF6/1615-1719  DR GENE3D; 1bb555323a47753607ce59ac7a50dbb8/1615-1719; 
#=GS B4HGF6/1615-1719  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3P470/1645-1749  AC B3P470
#=GS B3P470/1645-1749  OS Drosophila erecta
#=GS B3P470/1645-1749  DE GG17101
#=GS B3P470/1645-1749  DR GENE3D; d2e98581434666dd2dab4e85388c9de7/1645-1749; 
#=GS B3P470/1645-1749  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4QS68/576-680    AC B4QS68
#=GS B4QS68/576-680    OS Drosophila simulans
#=GS B4QS68/576-680    DE GD20546
#=GS B4QS68/576-680    DR GENE3D; 7eb2e114c7cbc6f8c4580e6980b02686/576-680; 
#=GS B4QS68/576-680    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF TC 140.5 5.3E-45
#=GF SQ 6
Q8ILY1/1643-1755          NGIKVDLENLQKSTNEILNELNIEKDNLKKKLKDEN---INVNSQQQVLKAL---QKNNVRDISNKLIENTSDSNLKNFLNHEEIISLRNYRRLYKLYSAFYLKLPLHINTKTNKIHTT
O18475/1667-1771          ----VGFPAQKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNLGSSQAVAKVLGLHRKAKGRVTTSRQVLEKLNSPISHL--------ILGYRKLSGLLAKSI--QPLMECCQADRIHGQ
W7JZR9/1643-1755          NGIKVDLENLQKSTNEILNELNIEKDNLKKKLKDEN---INVNSQQQVLKAL---QKNNVRDISNKLIENTSDSNLKNFLNHEEIISLRNYRRLYKLYSAFYLKLPLHINTKTNKIHTT
B4HGF6/1615-1719          ----VGFPAQKQRLQQLYQRMVAVMKKLETKIYEQHGSRFNLGSSQAVAKVLGLHRKAKGRVTTSRQVLEKLNSPISHL--------ILGYRKLSCLLAKSI--QPLMECCQADRIHGQ
B3P470/1645-1749          ----VGFPAQQQLLQQLYQKMVAVVRKLETKIFEQHGSRFNLGSSQAVAKVLGLHRKINGRVTTSRQVLEKLNTPISHM--------ILGYRKLAGLLAKSI--QPLLKCCQADRIHGQ
B4QS68/576-680            ----VGFPAQKQRLQQLYQRMVAVMKKLETKIYEQHGSRFNLGSSQAVAKVLGLHRKARGRVTTSRQVLEKLNSPISHL--------ILGYRKLSCLLAKSI--QPLMECCQADRIHGQ
#=GC scorecons            11119564546634566454645434575496366522259659494949592226945494555646354467464551111111164599694394544411499434466669954
#=GC scorecons_70         ____*_______________*______*__*__*______*__*_*_*_*_*____*___*____*_*_____*________________****__*________**_______***__
#=GC scorecons_80         ____*______________________*__*_________*__*_*_*_*_*____*___*____________*________________**_*__*________**________**__
#=GC scorecons_90         ____*_________________________*_________*__*_*_*_*_*____*___*_____________________________**_*__*________**________**__
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