# STOCKHOLM 1.0
#=GF ID 1.10.8.60/FF/10255
#=GF DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GF AC 1.10.8.60/FF/10255
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 22.478
#=GS L0GKQ3/360-442      AC L0GKQ3
#=GS L0GKQ3/360-442      OS Pseudomonas stutzeri RCH2
#=GS L0GKQ3/360-442      DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS L0GKQ3/360-442      DR GENE3D; 00daa75b8c816fbfba9d9745c1cc3a9e/360-442; 
#=GS L0GKQ3/360-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas stutzeri subgroup; Pseudomonas stutzeri; 
#=GS L0GKQ3/360-442      DR EC; 3.4.21.92; 
#=GS A0A0Q0IFN4/361-443  AC A0A0Q0IFN4
#=GS A0A0Q0IFN4/361-443  OS Pseudomonas syringae pv. aptata
#=GS A0A0Q0IFN4/361-443  DE ATP-dependent Clp protease, ATP-binding subunit ClpA
#=GS A0A0Q0IFN4/361-443  DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS A0A0Q0IFN4/361-443  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS A0A0Q0IFN4/361-443  DR EC; 3.4.21.92; 
#=GS A0A0F7A3V4/361-443  AC A0A0F7A3V4
#=GS A0A0F7A3V4/361-443  OS Pseudomonas syringae pv. syringae HS191
#=GS A0A0F7A3V4/361-443  DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS A0A0F7A3V4/361-443  DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS A0A0F7A3V4/361-443  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS A0A0F7A3V4/361-443  DR EC; 3.4.21.92; 
#=GS A0A0Q0A1P3/361-443  AC A0A0Q0A1P3
#=GS A0A0Q0A1P3/361-443  OS Pseudomonas syringae pv. solidagae
#=GS A0A0Q0A1P3/361-443  DE ATP-dependent Clp protease, ATP-binding subunit ClpA
#=GS A0A0Q0A1P3/361-443  DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS A0A0Q0A1P3/361-443  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS A0A0Q0A1P3/361-443  DR EC; 3.4.21.92; 
#=GS A0A0N8QBB3/361-443  AC A0A0N8QBB3
#=GS A0A0N8QBB3/361-443  OS Pseudomonas syringae pv. atrofaciens
#=GS A0A0N8QBB3/361-443  DE ATP-dependent Clp protease, ATP-binding subunit ClpA
#=GS A0A0N8QBB3/361-443  DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS A0A0N8QBB3/361-443  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS A0A0N8QBB3/361-443  DR EC; 3.4.21.92; 
#=GS A0A120AMM9/361-443  AC A0A120AMM9
#=GS A0A120AMM9/361-443  OS Pseudomonas syringae pv. syringae
#=GS A0A120AMM9/361-443  DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS A0A120AMM9/361-443  DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS A0A120AMM9/361-443  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS A0A120AMM9/361-443  DR EC; 3.4.21.92; 
#=GS F3FP88/361-443      AC F3FP88
#=GS F3FP88/361-443      OS Pseudomonas syringae pv. japonica str. M301072
#=GS F3FP88/361-443      DE ATP-dependent Clp protease, ATP-binding subunit ClpA
#=GS F3FP88/361-443      DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS F3FP88/361-443      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS F3FP88/361-443      DR EC; 3.4.21.92; 
#=GS Q4ZRK7/361-443      AC Q4ZRK7
#=GS Q4ZRK7/361-443      OS Pseudomonas syringae pv. syringae B728a
#=GS Q4ZRK7/361-443      DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS Q4ZRK7/361-443      DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS Q4ZRK7/361-443      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS Q4ZRK7/361-443      DR EC; 3.4.21.92; 
#=GS S3NKZ9/361-443      AC S3NKZ9
#=GS S3NKZ9/361-443      OS Pseudomonas syringae pv. syringae SM
#=GS S3NKZ9/361-443      DE ATP-dependent Clp protease, ATP-binding subunit ClpA
#=GS S3NKZ9/361-443      DR GENE3D; 87b739a4477883df80ea9740ab15545e/361-443; 
#=GS S3NKZ9/361-443      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas syringae; 
#=GS S3NKZ9/361-443      DR EC; 3.4.21.92; 
#=GS M4WXR4/355-442      AC M4WXR4
#=GS M4WXR4/355-442      OS Pseudomonas denitrificans ATCC 13867
#=GS M4WXR4/355-442      DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS M4WXR4/355-442      DR GENE3D; 032a2c3f1d3a54ea7aab9a69f5238f1a/355-442; 
#=GS M4WXR4/355-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas pertucinogena group; Pseudomonas denitrificans; 
#=GS A0A0Q0HYU3/361-443  AC A0A0Q0HYU3
#=GS A0A0Q0HYU3/361-443  OS Pseudomonas syringae pv. tomato
#=GS A0A0Q0HYU3/361-443  DE ATP-dependent clp protease, ATP-binding subunit ClpA
#=GS A0A0Q0HYU3/361-443  DR GENE3D; 36f54dc899115ba77fb6b6adbfc0073d/361-443; 
#=GS A0A0Q0HYU3/361-443  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 3; 
#=GS Q87ZS1/361-443      AC Q87ZS1
#=GS Q87ZS1/361-443      OS [Pseudomonas syringae] pv. tomato str. DC3000
#=GS Q87ZS1/361-443      DE ATP-dependent clp protease, ATP-binding subunit ClpA
#=GS Q87ZS1/361-443      DR GENE3D; 36f54dc899115ba77fb6b6adbfc0073d/361-443; 
#=GS Q87ZS1/361-443      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 3; 
#=GS A0A1K2CBM8/360-442  AC A0A1K2CBM8
#=GS A0A1K2CBM8/360-442  OS Pseudomonas sp. NFPP09
#=GS A0A1K2CBM8/360-442  DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS A0A1K2CBM8/360-442  DR GENE3D; 4d1a98e4eec0d58c2d1e8a46f0ac59bb/360-442; 
#=GS A0A1K2CBM8/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP09; 
#=GS A0A1K2EAU8/360-442  AC A0A1K2EAU8
#=GS A0A1K2EAU8/360-442  OS Pseudomonas sp. NFPP14
#=GS A0A1K2EAU8/360-442  DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS A0A1K2EAU8/360-442  DR GENE3D; 4d1a98e4eec0d58c2d1e8a46f0ac59bb/360-442; 
#=GS A0A1K2EAU8/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP14; 
#=GS A0A1K2BZV3/360-442  AC A0A1K2BZV3
#=GS A0A1K2BZV3/360-442  OS Pseudomonas sp. NFPP16
#=GS A0A1K2BZV3/360-442  DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS A0A1K2BZV3/360-442  DR GENE3D; 4d1a98e4eec0d58c2d1e8a46f0ac59bb/360-442; 
#=GS A0A1K2BZV3/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP16; 
#=GS Q4K9U8/360-442      AC Q4K9U8
#=GS Q4K9U8/360-442      OS Pseudomonas protegens Pf-5
#=GS Q4K9U8/360-442      DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS Q4K9U8/360-442      DR GENE3D; 4d1a98e4eec0d58c2d1e8a46f0ac59bb/360-442; 
#=GS Q4K9U8/360-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas protegens; 
#=GS S6J3H9/360-442      AC S6J3H9
#=GS S6J3H9/360-442      OS Pseudomonas sp. CF161
#=GS S6J3H9/360-442      DE ATP-dependent Clp protease, ATP-binding subunit ClpA
#=GS S6J3H9/360-442      DR GENE3D; 34495a62817164baf7406b89a3af803b/360-442; 
#=GS S6J3H9/360-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. CF161; 
#=GS W9TS60/360-442      AC W9TS60
#=GS W9TS60/360-442      OS Pseudomonas sp. BAY1663
#=GS W9TS60/360-442      DE ATP-binding protease component ClpA
#=GS W9TS60/360-442      DR GENE3D; 3f0f79ec2a283366a42de6069a930ca2/360-442; 
#=GS W9TS60/360-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. BAY1663; 
#=GS S6L7M8/360-442      AC S6L7M8
#=GS S6L7M8/360-442      OS Pseudomonas stutzeri B1SMN1
#=GS S6L7M8/360-442      DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS S6L7M8/360-442      DR GENE3D; cb100ae06f7d9b4bc3d96ecb5995325f/360-442; 
#=GS S6L7M8/360-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas stutzeri subgroup; Pseudomonas stutzeri; 
#=GS A0A0D7ECK4/360-442  AC A0A0D7ECK4
#=GS A0A0D7ECK4/360-442  OS Pseudomonas stutzeri
#=GS A0A0D7ECK4/360-442  DE Clp protease ClpX
#=GS A0A0D7ECK4/360-442  DR GENE3D; cb100ae06f7d9b4bc3d96ecb5995325f/360-442; 
#=GS A0A0D7ECK4/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas stutzeri subgroup; Pseudomonas stutzeri; 
#=GS A0A0F2R974/360-442  AC A0A0F2R974
#=GS A0A0F2R974/360-442  OS Pseudomonas sp. BRH_c35
#=GS A0A0F2R974/360-442  DE Clp protease ClpX
#=GS A0A0F2R974/360-442  DR GENE3D; cb100ae06f7d9b4bc3d96ecb5995325f/360-442; 
#=GS A0A0F2R974/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. BRH_c35; 
#=GS I4CSP6/360-442      AC I4CSP6
#=GS I4CSP6/360-442      OS Pseudomonas stutzeri CCUG 29243
#=GS I4CSP6/360-442      DE ATP-dependent Clp protease ATP-binding subunit ClpA
#=GS I4CSP6/360-442      DR GENE3D; cb100ae06f7d9b4bc3d96ecb5995325f/360-442; 
#=GS I4CSP6/360-442      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas stutzeri subgroup; Pseudomonas stutzeri; 
#=GS A0A098FP64/360-442  AC A0A098FP64
#=GS A0A098FP64/360-442  OS Pseudomonas xanthomarina
#=GS A0A098FP64/360-442  DE ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity
#=GS A0A098FP64/360-442  DR GENE3D; cb100ae06f7d9b4bc3d96ecb5995325f/360-442; 
#=GS A0A098FP64/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas xanthomarina; 
#=GS A0A0I9SEQ2/360-442  AC A0A0I9SEQ2
#=GS A0A0I9SEQ2/360-442  OS Pseudomonas sp. BICA1-14
#=GS A0A0I9SEQ2/360-442  DE Clp protease ClpX
#=GS A0A0I9SEQ2/360-442  DR GENE3D; cb100ae06f7d9b4bc3d96ecb5995325f/360-442; 
#=GS A0A0I9SEQ2/360-442  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas sp. BICA1-14; 
#=GF TC 186.4 3.4E-59
#=GF SQ 24
L0GKQ3/360-442              -----GILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEDQRVKCIDVEQVEDIVAKIARIPP
A0A0Q0IFN4/361-443          -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
A0A0F7A3V4/361-443          -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
A0A0Q0A1P3/361-443          -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
A0A0N8QBB3/361-443          -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
A0A120AMM9/361-443          -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
F3FP88/361-443              -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
Q4ZRK7/361-443              -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
S3NKZ9/361-443              -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRAKRIDVPEVEDIVAKIARIPP
M4WXR4/355-442              IEDTVGILKGLKPRFEQHHHIEYSDEALRAAAELAARYINDRHMPDKAIDVIDEAGAYQRLQPEEKRVKRIEVPQVEDIVAKIARIPP
A0A0Q0HYU3/361-443          -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRVKRIDVPQVEDIVAKIARIPP
Q87ZS1/361-443              -----GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRVKRIDVPQVEDIVAKIARIPP
A0A1K2CBM8/360-442          -----GILRGLKGRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPAEKRVKRIEVAQVEDIVAKIARIPP
A0A1K2EAU8/360-442          -----GILRGLKGRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPAEKRVKRIEVAQVEDIVAKIARIPP
A0A1K2BZV3/360-442          -----GILRGLKGRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPAEKRVKRIEVAQVEDIVAKIARIPP
Q4K9U8/360-442              -----GILRGLKGRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPAEKRVKRIEVAQVEDIVAKIARIPP
S6J3H9/360-442              -----GILRGLKGRFEQHHGIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEKRVKRIEVPQVEDIVAKIARIPP
W9TS60/360-442              -----GILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEKRVKCIDVEQVENIVAKIARIPP
S6L7M8/360-442              -----GILRGLKGRFEQHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEQRVKCIDVEQVEDIVAKIARIPP
A0A0D7ECK4/360-442          -----GILRGLKGRFEQHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEQRVKCIDVEQVEDIVAKIARIPP
A0A0F2R974/360-442          -----GILRGLKGRFEQHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEQRVKCIDVEQVEDIVAKIARIPP
I4CSP6/360-442              -----GILRGLKGRFEQHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEQRVKCIDVEQVEDIVAKIARIPP
A0A098FP64/360-442          -----GILRGLKGRFEQHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEQRVKCIDVEQVEDIVAKIARIPP
A0A0I9SEQ2/360-442          -----GILRGLKGRFEQHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEEQRVKCIDVEQVEDIVAKIARIPP
#=GC scorecons              0000099989995999999599999999999999979999999999999999999999999994869695979469989999999999
#=GC scorecons_70           _____*******_******_*******************************************_*****_***_**************
#=GC scorecons_80           _____*******_******_*******************************************_*_*_*_***__*************
#=GC scorecons_90           _____*******_******_***************_***************************_*_*_*_*_*__*************
//