# STOCKHOLM 1.0
#=GF ID 1.10.601.10/FF/966
#=GF DE RNA polymerase sigma subunit 1
#=GF AC 1.10.601.10/FF/966
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 6.791
#=GS O24629/51-333  AC O24629
#=GS O24629/51-333  OS Arabidopsis thaliana
#=GS O24629/51-333  DE RNA polymerase sigma factor sigA
#=GS O24629/51-333  DR GENE3D; 5b5e8c93b592e985f84794a34790c1c4/51-333; 
#=GS O24629/51-333  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS O24629/51-333  DR GO; GO:0001053; GO:0005515; GO:0006352; GO:0006355; GO:0009507; GO:0016987; GO:0071461; GO:0071482; GO:0080005; GO:2001141; 
#=GS D7KZ14/41-334  AC D7KZ14
#=GS D7KZ14/41-334  OS Arabidopsis lyrata subsp. lyrata
#=GS D7KZ14/41-334  DE RNA polymerase sigma subunit 1
#=GS D7KZ14/41-334  DR GENE3D; 460f387d999849878b32e64c75ab58de/41-334; 
#=GS D7KZ14/41-334  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GF TC 641.3 2.2E-197
#=GF SQ 2
O24629/51-333          ----------AKKA--SNYSPSFPSSNRHTQSAKALKESVDVASTEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRT
D7KZ14/41-334          HIASTKSGITAKKASSSNYSPSFPSSNRHTQSAKALKESVDVASTEKPWIHNGTDKELEEEGY-DDDLIGHSVEALLLLQKSMLEKSWNLSFEKAASSESSSKRTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRT
#=GC scorecons         0000000000999900999999999999999999999999999999999429999999999290999993999994999999999999999999939992339299999999999999999999999999999999999999999999999999999999999939999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70      __________****__*********************************__**********_*_*****_*****_*******************_***___*_************************************************************_**********************************************************************************************************************************
#=GC scorecons_80      __________****__*********************************__**********_*_*****_*****_*******************_***___*_************************************************************_**********************************************************************************************************************************
#=GC scorecons_90      __________****__*********************************__**********_*_*****_*****_*******************_***___*_************************************************************_**********************************************************************************************************************************
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