# STOCKHOLM 1.0
#=GF ID 1.10.601.10/FF/812
#=GF DE RNA polymerase sigma factor SigA
#=GF AC 1.10.601.10/FF/812
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 12.377
#=GS P78022/3-324      AC P78022
#=GS P78022/3-324      OS Mycoplasma pneumoniae M129
#=GS P78022/3-324      DE RNA polymerase sigma factor SigA
#=GS P78022/3-324      DR GENE3D; 8bec5144e8d4fcd777528620d647dbbf/3-324; 
#=GS P78022/3-324      DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma pneumoniae; 
#=GS P47491/8-322      AC P47491
#=GS P47491/8-322      OS Mycoplasma genitalium G37
#=GS P47491/8-322      DE RNA polymerase sigma factor SigA
#=GS P47491/8-322      DR GENE3D; 61ed78fb80d08c8ecb0014f3f41051c2/8-322; 
#=GS P47491/8-322      DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma genitalium; 
#=GS A0A193PTH3/3-324  AC A0A193PTH3
#=GS A0A193PTH3/3-324  OS Mycoplasma pneumoniae
#=GS A0A193PTH3/3-324  DE RNA polymerase sigma factor SigA
#=GS A0A193PTH3/3-324  DR GENE3D; 8bec5144e8d4fcd777528620d647dbbf/3-324; 
#=GS A0A193PTH3/3-324  DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma pneumoniae; 
#=GS A0A0H3DNT0/3-324  AC A0A0H3DNT0
#=GS A0A0H3DNT0/3-324  OS Mycoplasma pneumoniae FH
#=GS A0A0H3DNT0/3-324  DE RNA polymerase sigma factor SigA
#=GS A0A0H3DNT0/3-324  DR GENE3D; 8bec5144e8d4fcd777528620d647dbbf/3-324; 
#=GS A0A0H3DNT0/3-324  DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma pneumoniae; 
#=GF TC 693.0 5.1E-213
#=GF SQ 4
P78022/3-324              SPKKNFKKPQPKTENQKQALNEERIAELKKSRILGKNRPFKKMIYVDTKAQRKQKHENVAFLKTLQENKESDVPKKRRGRKPKHAPLKEKNNLKLFDILEGSLKSHTENDDTNKVISLLVEVWEKKNKKKDNN-SLSNKDIVNVLSKFELPDDEIIFVLDELRDKGIELPHDVEEHIHEFRANQDLSIIDEDIEELTTKNISNRDKVDDNVRFFLGSLDSSKMLDFESEQRIAKVLNSTDEESRKYAINQLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAISKFNWSLGNKFSTYATWWIKQAITRAIADQARTVR
P47491/8-322              LGE--------KPNSTKPELSEELIAELKKQRILEKNRPYKKMIYVDNKVQRKHRHENIAFLKTLHENKESDVPKKRRGRKPKHAPLKEKNNLKLFDILEGSLKSHIENDDTNTVINLLTEAWEKKSKKKQKNITLSNKEIISVLAKFELPEDEIIYVLDELRDKGIQLQHDVEEHIHEFRANQDLSIIDEDIEELTSKNISNRDKVDDNVRFFLGSLDFSKMLDFESEQRIAKVLNSTDEESRKYAINQLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAISKFNWSLGNKFSTYATWWIKQAITRAIADQARTVR
A0A193PTH3/3-324          SPKKNFKKPQPKTENQKQALNEERIAELKKSRILGKNRPFKKMIYVDTKAQRKQKHENVAFLKTLQENKESDVPKKRRGRKPKHAPLKEKNNLKLFDILEGSLKSHTENDDTNKVISLLVEVWEKKNKKKDNN-SLSNKDIVNVLSKFELPDDEIIFVLDELRDKGIELPHDVEEHIHEFRANQDLSIIDEDIEELTTKNISNRDKVDDNVRFFLGSLDSSKMLDFESEQRIAKVLNSTDEESRKYAINQLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAISKFNWSLGNKFSTYATWWIKQAITRAIADQARTVR
A0A0H3DNT0/3-324          SPKKNFKKPQPKTENQKQALNEERIAELKKSRILGKNRPFKKMIYVDTKAQRKQKHENVAFLKTLQENKESDVPKKRRGRKPKHAPLKEKNNLKLFDILEGSLKSHTENDDTNKVISLLVEVWEKKNKKKDNN-SLSNKDIVNVLSKFELPDDEIIFVLDELRDKGIELPHDVEEHIHEFRANQDLSIIDEDIEELTTKNISNRDKVDDNVRFFLGSLDSSKMLDFESEQRIAKVLNSTDEESRKYAINQLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAISKFNWSLGNKFSTYATWWIKQAITRAIADQARTVR
#=GC scorecons            34422222222944449449499399999949994999969999999494999569996999999599999999999999999999999999999999999999994999999499499494999949994490499996964994999996999969999999999594999999999999999999999999999499999999999999999999939999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70         ___________*____*__*_**_******_***_************_*_***_***********_****************************************_******_**_**_*_****_***__*__*******_**_*********************_*_***************************_*********************_*******************************************************************************************************
#=GC scorecons_80         ___________*____*__*_**_******_***_****_*******_*_***__***_******_****************************************_******_**_**_*_****_***__*__****_*__**_*****_****_**********_*_***************************_*********************_*******************************************************************************************************
#=GC scorecons_90         ___________*____*__*_**_******_***_****_*******_*_***__***_******_****************************************_******_**_**_*_****_***__*__****_*__**_*****_****_**********_*_***************************_*********************_*******************************************************************************************************
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