# STOCKHOLM 1.0 #=GF ID 1.10.601.10/FF/5822 #=GF DE RNA polymerase sigma factor #=GF AC 1.10.601.10/FF/5822 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 27.451 #=GS P18249/70-172 AC P18249 #=GS P18249/70-172 OS Streptomyces coelicolor A3(2) #=GS P18249/70-172 DE RNA polymerase principal sigma factor HrdD #=GS P18249/70-172 DR GENE3D; 62b36a22622d63fcfbc64e3e6fc01598/70-172; #=GS P18249/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces coelicolor; #=GS A0A072SFN0/70-172 AC A0A072SFN0 #=GS A0A072SFN0/70-172 OS Streptomyces griseorubens #=GS A0A072SFN0/70-172 DE RNA polymerase sigma factor #=GS A0A072SFN0/70-172 DR GENE3D; ddf0345e08f2ccbe55b1b7346a95bfec/70-172; #=GS A0A072SFN0/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces griseorubens; #=GS B1VTL5/68-173 AC B1VTL5 #=GS B1VTL5/68-173 OS Streptomyces griseus subsp. griseus NBRC 13350 #=GS B1VTL5/68-173 DE RNA polymerase sigma factor #=GS B1VTL5/68-173 DR GENE3D; 6b6bab24434aaf97dc1944b9eb72ba88/68-173; #=GS B1VTL5/68-173 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces griseus group; Streptomyces griseus; Streptomyces griseus subsp. griseus; #=GS A0A1A9DVD1/68-173 AC A0A1A9DVD1 #=GS A0A1A9DVD1/68-173 OS Streptomyces sp. MnatMP-M77 #=GS A0A1A9DVD1/68-173 DE RNA polymerase sigma factor #=GS A0A1A9DVD1/68-173 DR GENE3D; 6b6bab24434aaf97dc1944b9eb72ba88/68-173; #=GS A0A1A9DVD1/68-173 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. MnatMP-M77; #=GS G0Q0Q7/68-173 AC G0Q0Q7 #=GS G0Q0Q7/68-173 OS Streptomyces sp. ACT-1 #=GS G0Q0Q7/68-173 DE RNA polymerase sigma factor #=GS G0Q0Q7/68-173 DR GENE3D; 6b6bab24434aaf97dc1944b9eb72ba88/68-173; #=GS G0Q0Q7/68-173 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. ACT-1; #=GS A0A1C4T4F4/68-173 AC A0A1C4T4F4 #=GS A0A1C4T4F4/68-173 OS Streptomyces sp. OspMP-M43 #=GS A0A1C4T4F4/68-173 DE RNA polymerase sigma factor #=GS A0A1C4T4F4/68-173 DR GENE3D; 6b6bab24434aaf97dc1944b9eb72ba88/68-173; #=GS A0A1C4T4F4/68-173 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. OspMP-M43; #=GS A0A0C2ANL6/65-171 AC A0A0C2ANL6 #=GS A0A0C2ANL6/65-171 OS Streptomyces sp. AcH 505 #=GS A0A0C2ANL6/65-171 DE RNA polymerase sigma factor #=GS A0A0C2ANL6/65-171 DR GENE3D; 2fb5986f5a370ab03e7714bd848ef432/65-171; #=GS A0A0C2ANL6/65-171 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. AcH 505; #=GS A0A081XRN6/71-172 AC A0A081XRN6 #=GS A0A081XRN6/71-172 OS Streptomyces toyocaensis #=GS A0A081XRN6/71-172 DE RNA polymerase sigma factor #=GS A0A081XRN6/71-172 DR GENE3D; 996aea774f0a78f020985120f3fccc6f/71-172; #=GS A0A081XRN6/71-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces toyocaensis; #=GS D9XGY0/70-172 AC D9XGY0 #=GS D9XGY0/70-172 OS Streptomyces viridochromogenes DSM 40736 #=GS D9XGY0/70-172 DE RNA polymerase sigma factor #=GS D9XGY0/70-172 DR GENE3D; 48bd0368d226e074a54c7943965721a3/70-172; #=GS D9XGY0/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces viridochromogenes; #=GS S5VHX1/70-172 AC S5VHX1 #=GS S5VHX1/70-172 OS Streptomyces collinus Tu 365 #=GS S5VHX1/70-172 DE RNA polymerase sigma factor #=GS S5VHX1/70-172 DR GENE3D; 261dddf8b229c6c859e4732e85a41708/70-172; #=GS S5VHX1/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces collinus; #=GS A0A1J7ASG1/70-172 AC A0A1J7ASG1 #=GS A0A1J7ASG1/70-172 OS Streptomyces pluripotens #=GS A0A1J7ASG1/70-172 DE RNA polymerase sigma factor #=GS A0A1J7ASG1/70-172 DR GENE3D; 575f1eff083bba00e75a47ccecf4dc7a/70-172; #=GS A0A1J7ASG1/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces pluripotens; #=GS L7EWL5/72-173 AC L7EWL5 #=GS L7EWL5/72-173 OS Streptomyces turgidiscabies Car8 #=GS L7EWL5/72-173 DE RNA polymerase sigma factor #=GS L7EWL5/72-173 DR GENE3D; 4a0ce82c7da8d570497bed75384e9575/72-173; #=GS L7EWL5/72-173 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces turgidiscabies; #=GS C9YWE0/69-172 AC C9YWE0 #=GS C9YWE0/69-172 OS Streptomyces scabiei 87.22 #=GS C9YWE0/69-172 DE RNA polymerase sigma factor #=GS C9YWE0/69-172 DR GENE3D; 6b53639b8c993e7eca4fcf4b2f2353bd/69-172; #=GS C9YWE0/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces scabiei; #=GS D6ETC3/70-172 AC D6ETC3 #=GS D6ETC3/70-172 OS Streptomyces lividans TK24 #=GS D6ETC3/70-172 DE RNA polymerase sigma factor #=GS D6ETC3/70-172 DR GENE3D; 62b36a22622d63fcfbc64e3e6fc01598/70-172; #=GS D6ETC3/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces lividans; #=GS A0A1H2BAC3/70-172 AC A0A1H2BAC3 #=GS A0A1H2BAC3/70-172 OS Streptomyces sp. 2114.2 #=GS A0A1H2BAC3/70-172 DE RNA polymerase sigma factor #=GS A0A1H2BAC3/70-172 DR GENE3D; 62b36a22622d63fcfbc64e3e6fc01598/70-172; #=GS A0A1H2BAC3/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. 2114.2; #=GS V4J1Z1/69-172 AC V4J1Z1 #=GS V4J1Z1/69-172 OS Streptomyces sp. PVA 94-07 #=GS V4J1Z1/69-172 DE RNA polymerase sigma factor #=GS V4J1Z1/69-172 DR GENE3D; 67616b4fca0e312f835b9197b87c2001/69-172; #=GS V4J1Z1/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. PVA 94-07; #=GS B5HKY0/67-172 AC B5HKY0 #=GS B5HKY0/67-172 OS Streptomyces sviceus ATCC 29083 #=GS B5HKY0/67-172 DE RNA polymerase sigma factor #=GS B5HKY0/67-172 DR GENE3D; a3483cdbdd3fc54ef107cb7a4e2c882b/67-172; #=GS B5HKY0/67-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sviceus; #=GS A0A022MD03/77-182 AC A0A022MD03 #=GS A0A022MD03/77-182 OS Streptomyces sp. Tu 6176 #=GS A0A022MD03/77-182 DE RNA polymerase sigma factor #=GS A0A022MD03/77-182 DR GENE3D; 72bd33588f855d1ca4464fbde3ed6b0a/77-182; #=GS A0A022MD03/77-182 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. Tu 6176; #=GS A0A1C4L3Y1/69-172 AC A0A1C4L3Y1 #=GS A0A1C4L3Y1/69-172 OS Streptomyces sp. IgraMP-1 #=GS A0A1C4L3Y1/69-172 DE RNA polymerase sigma factor #=GS A0A1C4L3Y1/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS A0A1C4L3Y1/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. IgraMP-1; #=GS D6B1R0/69-172 AC D6B1R0 #=GS D6B1R0/69-172 OS Streptomyces albus J1074 #=GS D6B1R0/69-172 DE RNA polymerase sigma factor #=GS D6B1R0/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS D6B1R0/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albus group; Streptomyces albus; #=GS A0A0H1AF44/69-172 AC A0A0H1AF44 #=GS A0A0H1AF44/69-172 OS Streptomyces sp. KE1 #=GS A0A0H1AF44/69-172 DE RNA polymerase sigma factor #=GS A0A0H1AF44/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS A0A0H1AF44/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. KE1; #=GS A0A1C4KFX8/69-172 AC A0A1C4KFX8 #=GS A0A1C4KFX8/69-172 OS Streptomyces sp. BvitLS-983 #=GS A0A1C4KFX8/69-172 DE RNA polymerase sigma factor #=GS A0A1C4KFX8/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS A0A1C4KFX8/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. BvitLS-983; #=GS Q59914/69-172 AC Q59914 #=GS Q59914/69-172 OS Streptomyces griseus #=GS Q59914/69-172 DE RNA polymerase principal sigma factor HrdD #=GS Q59914/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS Q59914/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces griseus group; Streptomyces griseus; #=GS K1VX11/69-172 AC K1VX11 #=GS K1VX11/69-172 OS Streptomyces sp. SM8 #=GS K1VX11/69-172 DE RNA polymerase sigma factor #=GS K1VX11/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS K1VX11/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. SM8; #=GS A0A1C4NFJ6/69-172 AC A0A1C4NFJ6 #=GS A0A1C4NFJ6/69-172 OS Streptomyces sp. ScaeMP-6W #=GS A0A1C4NFJ6/69-172 DE RNA polymerase sigma factor #=GS A0A1C4NFJ6/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS A0A1C4NFJ6/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. ScaeMP-6W; #=GS A0A0X3WKB2/69-172 AC A0A0X3WKB2 #=GS A0A0X3WKB2/69-172 OS Streptomyces griseus subsp. griseus #=GS A0A0X3WKB2/69-172 DE RNA polymerase sigma factor #=GS A0A0X3WKB2/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS A0A0X3WKB2/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces griseus group; Streptomyces griseus; Streptomyces griseus subsp. griseus; #=GS A0A126Y1S3/69-172 AC A0A126Y1S3 #=GS A0A126Y1S3/69-172 OS Streptomyces albus #=GS A0A126Y1S3/69-172 DE RNA polymerase sigma factor #=GS A0A126Y1S3/69-172 DR GENE3D; 556eaa427c99537871f0c0dc6d890d0a/69-172; #=GS A0A126Y1S3/69-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albus group; Streptomyces albus; #=GS A0A089XCR5/70-172 AC A0A089XCR5 #=GS A0A089XCR5/70-172 OS Streptomyces glaucescens #=GS A0A089XCR5/70-172 DE RNA polymerase sigma factor #=GS A0A089XCR5/70-172 DR GENE3D; 3c4d95356e9c857ff38cb53bd5c6f4bd/70-172; #=GS A0A089XCR5/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces glaucescens; #=GS L1L722/70-172 AC L1L722 #=GS L1L722/70-172 OS Streptomyces ipomoeae 91-03 #=GS L1L722/70-172 DE RNA polymerase sigma factor #=GS L1L722/70-172 DR GENE3D; 5f55d2eb18dd05386615e565efcd8377/70-172; #=GS L1L722/70-172 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces ipomoeae; #=GF TC 207.2 1.9E-65 #=GF SQ 29 P18249/70-172 ---VLEGY-EETGADATREELQALIDESERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR A0A072SFN0/70-172 ---ILDGR-EENKVGATPEELQALVDASERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR B1VTL5/68-173 -QQILDGEVESTTGDAKREELEALVAEGERAKDIFIRSNLRLVVAVARRYPRAGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1A9DVD1/68-173 -QQILDGEVESTTGDAKREELEALVAEGERAKDIFIRSNLRLVVAVARRYPRAGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR G0Q0Q7/68-173 -QQILDGEVESTTGDAKREELEALVAEGERAKDIFIRSNLRLVVAVARRYPRAGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1C4T4F4/68-173 -QQILDGEVESTTGDAKREELEALVAEGERAKDIFIRSNLRLVVAVARRYPRAGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A0C2ANL6/65-171 ARQILEGDVQSEAGGASREELEALIAEGERAKDIFIKSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A081XRN6/71-172 ----LDGL-EENKAGATPEELRALVDASERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR D9XGY0/70-172 ---VLDGF-EETKAEATREELESLVADAERAKDIFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR S5VHX1/70-172 ---VLDGE-EESATDATREELESLFAAGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1J7ASG1/70-172 ---VLDGC-EETGADATREELEALVAESERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR L7EWL5/72-173 ----LDGE-AEAEADATVEELEALFAESERAKDIFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR C9YWE0/69-172 --QILDGE-EEAQADATREELEALVADSERAKDIFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR D6ETC3/70-172 ---VLEGY-EETGADATREELQALIDESERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1H2BAC3/70-172 ---VLEGY-EETGADATREELQALIDESERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR V4J1Z1/69-172 ---ILDGEVDSDSAGASHEELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR B5HKY0/67-172 ARQVLDGF-EEAKADATREELEALVEESERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR A0A022MD03/77-182 ARQILDGY-EETPADASREELQALVDEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1C4L3Y1/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR D6B1R0/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A0H1AF44/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1C4KFX8/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR Q59914/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR K1VX11/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A1C4NFJ6/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A0X3WKB2/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A126Y1S3/69-172 ---ILDGEVDSDSAGASREELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQSRTIR A0A089XCR5/70-172 ---VLDGY-EESKADATREELEALVAEGERAKDIFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR L1L722/70-172 ---ILEGE-EEARADATREELEALVADSERAKDIFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIR #=GC scorecons 00069794165436695799978976669999979989999999999999997999999999999999999999999599999999999999999999999999999 #=GC scorecons_70 ____***__*___*_*_********_*_*************************************************_***************************** #=GC scorecons_80 ____***________*__***_**____*************************************************_***************************** #=GC scorecons_90 ____*_*________*__***_**____*****_******************_************************_***************************** //