# STOCKHOLM 1.0
#=GF ID 1.10.565.10/FF/2092
#=GF DE Nuclear hormone receptor family member nhr-1
#=GF AC 1.10.565.10/FF/2092
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 13.453
#=GS Q21878/216-445  AC Q21878
#=GS Q21878/216-445  OS Caenorhabditis elegans
#=GS Q21878/216-445  DE Nuclear hormone receptor family member nhr-1
#=GS Q21878/216-445  DR GENE3D; 59b8135eb4a62a28b95824b88109e238/216-445; 
#=GS Q21878/216-445  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS K7H5J1/308-539  AC K7H5J1
#=GS K7H5J1/308-539  OS Caenorhabditis japonica
#=GS K7H5J1/308-539  DE Uncharacterized protein
#=GS K7H5J1/308-539  DR GENE3D; 0191dcb14c7b0a0bbf337a8babb2243e/308-539; 
#=GS K7H5J1/308-539  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS G0MID6/198-434  AC G0MID6
#=GS G0MID6/198-434  OS Caenorhabditis brenneri
#=GS G0MID6/198-434  DE CBN-NHR-1 protein
#=GS G0MID6/198-434  DR GENE3D; 59f571b27fd05fb0c9c96d58a58bb090/198-434; 
#=GS G0MID6/198-434  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3MMK7/212-441  AC E3MMK7
#=GS E3MMK7/212-441  OS Caenorhabditis remanei
#=GS E3MMK7/212-441  DE CRE-NHR-1 protein
#=GS E3MMK7/212-441  DR GENE3D; 90cb001e4ae9db27abffc5fd489971ec/212-441; 
#=GS E3MMK7/212-441  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A8WRG5/206-439  AC A8WRG5
#=GS A8WRG5/206-439  OS Caenorhabditis briggsae
#=GS A8WRG5/206-439  DE Protein CBR-NHR-1
#=GS A8WRG5/206-439  DR GENE3D; 04d0739ae632dae4d0bdef6ffd1a46a9/206-439; 
#=GS A8WRG5/206-439  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS K7H5J2/302-536  AC K7H5J2
#=GS K7H5J2/302-536  OS Caenorhabditis japonica
#=GS K7H5J2/302-536  DE Uncharacterized protein
#=GS K7H5J2/302-536  DR GENE3D; 7a551753e9d974512dd7059680e2fe73/302-536; 
#=GS K7H5J2/302-536  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GF TC 534.1 1.3E-164
#=GF SQ 6
Q21878/216-445          ----------CLLFETTDLKVDVSLTNTIFKELFPASMNDIRMWNIREMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDALDLSPQAKQEVFEERNKYLGGLFTCITQKIGIPTGVQKYGSLLMMTASIQNILAQNEENMQVMELFKNWEVDPFVKELCMKRA
K7H5J1/308-539          --------SPCLLFETTELKVDVSLTNTIFKELYPASMNDIRMWNIREMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRNLQLNVTEFATFKATLFFNPDALDLSPTAKQEVFEERNKYLGALFTCISQKLGIPAGVQKYGSLLMMTASIQNILAQNEENMQVMELFKNWEVDPFVKELCMKRA
G0MID6/198-434          TGVTHALTSPCLLFETTDLKVD---TSTMFKELYPASMNDIRMWNIREMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLAVSEFATFKAALFFNPDALDLSASAKQEVFEERNKYLGGLFTCITQKMGIPTGVQKYGSLLMMTASIQNILAQNEENMQVMELFKNWEVDPFVKELCMKRA
E3MMK7/212-441          ----------CLLFETTDLKVDVSLTNTIFKELYPASMNDIRMWNIREMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVSEFATFKAALFFNPDALDLSPSAKQEVFEERNKYLGALFTCITQKIGIPTGVQKYGSLLMMTASIQNILAQNEENMQVMELFKNWEVDPFVKELCMKRA
A8WRG5/206-439          ---THALTSPCLLFETTDLKVD---TNIMFKELYPASMNDIRMWNIREMRICIEWAKTFDIYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVSEFATFKAALFFNPDALDLSAPAKTEVFEERNKYLGGLFTCITQKIGIPSGVQKYGSLLMMTASIQNILAQNEENMQVMELFKNWEVDPFVKELCMKRA
K7H5J2/302-536          --VTHALTSPCLLFETTELKVD---TNTIFKELYPASMNDIRMWNIREMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRNLQLNVTEFATFKATLFFNPDALDLSPTAKQEVFEERNKYLGALFTCISQKLGIPAGVQKYGSLLMMTASIQNILAQNEENMQVMELFKNWEVDPFVKELCMKRA
#=GC scorecons          000111113399999997999911197769999899999999999999999999999999799999999999999999999999999999999999999999999999999999999999999999999999999699949599999996999999999996399699999999999599999699599959999999999999999999999999999999999999999999999999
#=GC scorecons_70       __________************___**************************************************************************************************************_***_*_*******************__**************_*****_**_***_*************************************************
#=GC scorecons_80       __________*******_****___*___**********************************************************************************************************_***_*_*******_***********__**_***********_*****_**_***_*************************************************
#=GC scorecons_90       __________*******_****___*___****_**************************_**************************************************************************_***_*_*******_***********__**_***********_*****_**_***_*************************************************
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