# STOCKHOLM 1.0
#=GF ID 1.10.560.10/FF/6408
#=GF DE T-complex protein 1 subunit theta
#=GF AC 1.10.560.10/FF/6408
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 82.233
#=GS Q7K3J0/371-539        AC Q7K3J0
#=GS Q7K3J0/371-539        OS Drosophila melanogaster
#=GS Q7K3J0/371-539        DE CG8258
#=GS Q7K3J0/371-539        DR GENE3D; 7dde112ff52bde845483a1ed89d6deb5/371-539; 
#=GS Q7K3J0/371-539        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q7K3J0/371-539        DR GO; GO:0005886; 
#=GS Q7K3J0/371-539        DR EC; 3.6.1.3; 
#=GS T1JMI0/390-558        AC T1JMI0
#=GS T1JMI0/390-558        OS Strigamia maritima
#=GS T1JMI0/390-558        DE Uncharacterized protein
#=GS T1JMI0/390-558        DR GENE3D; 0522a12aaa979481dbd36074e3148cc8/390-558; 
#=GS T1JMI0/390-558        DR ORG; Eukaryota; Metazoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia; Strigamia maritima; 
#=GS B4P3D7/371-542        AC B4P3D7
#=GS B4P3D7/371-542        OS Drosophila yakuba
#=GS B4P3D7/371-542        DE Uncharacterized protein
#=GS B4P3D7/371-542        DR GENE3D; 00492bb0f928e2f591654aff536bdf1f/371-542; 
#=GS B4P3D7/371-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS Q6EEA2/139-294        AC Q6EEA2
#=GS Q6EEA2/139-294        OS Protopterus dolloi
#=GS Q6EEA2/139-294        DE Chaperonin subunit 8 theta
#=GS Q6EEA2/139-294        DR GENE3D; 04435b23d99d89cb2444eeeb28db18df/139-294; 
#=GS Q6EEA2/139-294        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Ceratodontimorpha; Lepidosireniformes; Protopteridae; Protopterus; Protopterus dolloi; 
#=GS B4QGA3/371-540        AC B4QGA3
#=GS B4QGA3/371-540        OS Drosophila simulans
#=GS B4QGA3/371-540        DE GD10130
#=GS B4QGA3/371-540        DR GENE3D; 0784c54124c14da2fbfe94760495666d/371-540; 
#=GS B4QGA3/371-540        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4LNN4/373-542        AC B4LNN4
#=GS B4LNN4/373-542        OS Drosophila virilis
#=GS B4LNN4/373-542        DE Uncharacterized protein
#=GS B4LNN4/373-542        DR GENE3D; 1ef86088dd0b3d54e0406373e8e3efac/373-542; 
#=GS B4LNN4/373-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JVE5/370-542        AC B4JVE5
#=GS B4JVE5/370-542        OS Drosophila grimshawi
#=GS B4JVE5/370-542        DE GH22689
#=GS B4JVE5/370-542        DR GENE3D; 38005d9661169946fb53f54c19a2bf44/370-542; 
#=GS B4JVE5/370-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4GCT8/371-542        AC B4GCT8
#=GS B4GCT8/371-542        OS Drosophila persimilis
#=GS B4GCT8/371-542        DE GL10409
#=GS B4GCT8/371-542        DR GENE3D; 3d91ec766f868268b23e58cc87a7448f/371-542; 
#=GS B4GCT8/371-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A0M4E3Z2/406-577    AC A0A0M4E3Z2
#=GS A0A0M4E3Z2/406-577    OS Drosophila busckii
#=GS A0A0M4E3Z2/406-577    DE CG8258
#=GS A0A0M4E3Z2/406-577    DR GENE3D; 517f251d42bd3218ab7d1ba7506cfa12/406-577; 
#=GS A0A0M4E3Z2/406-577    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS Q28Y76/371-542        AC Q28Y76
#=GS Q28Y76/371-542        OS Drosophila pseudoobscura pseudoobscura
#=GS Q28Y76/371-542        DE Uncharacterized protein
#=GS Q28Y76/371-542        DR GENE3D; 51e8f237c4c64f27583800767fa29a4e/371-542; 
#=GS Q28Y76/371-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0L0C5U2/382-552    AC A0A0L0C5U2
#=GS A0A0L0C5U2/382-552    OS Lucilia cuprina
#=GS A0A0L0C5U2/382-552    DE Uncharacterized protein
#=GS A0A0L0C5U2/382-552    DR GENE3D; 5f94b90073effc7c552828e3dea12a08/382-552; 
#=GS A0A0L0C5U2/382-552    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia; Lucilia cuprina; 
#=GS B4HSA8/371-540        AC B4HSA8
#=GS B4HSA8/371-540        OS Drosophila sechellia
#=GS B4HSA8/371-540        DE GM20657
#=GS B4HSA8/371-540        DR GENE3D; c4e767ee83828efb4bb8d644f2bd5e60/371-540; 
#=GS B4HSA8/371-540        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4MQW0/370-542        AC B4MQW0
#=GS B4MQW0/370-542        OS Drosophila willistoni
#=GS B4MQW0/370-542        DE GK21949
#=GS B4MQW0/370-542        DR GENE3D; d5129ea1fa6a85d279d88a36f9d0f379/370-542; 
#=GS B4MQW0/370-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B3N850/371-542        AC B3N850
#=GS B3N850/371-542        OS Drosophila erecta
#=GS B3N850/371-542        DE Uncharacterized protein
#=GS B3N850/371-542        DR GENE3D; ec1297f40b0615bfbc33015ecf764267/371-542; 
#=GS B3N850/371-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B3MFD3/371-542        AC B3MFD3
#=GS B3MFD3/371-542        OS Drosophila ananassae
#=GS B3MFD3/371-542        DE Uncharacterized protein
#=GS B3MFD3/371-542        DR GENE3D; fd3473d72c5579fd3aeb035862629172/371-542; 
#=GS B3MFD3/371-542        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS G5DY13/123-241        AC G5DY13
#=GS G5DY13/123-241        OS Pipa carvalhoi
#=GS G5DY13/123-241        DE Putative chaperonin subunit 8 theta
#=GS G5DY13/123-241        DR GENE3D; 256318aed3466b7365396c43d6e920b6/123-241; 
#=GS G5DY13/123-241        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Pipinae; Pipa; Pipa carvalhoi; 
#=GS E2A4E1/35-69_328-446  AC E2A4E1
#=GS E2A4E1/35-69_328-446  OS Camponotus floridanus
#=GS E2A4E1/35-69_328-446  DE T-complex protein 1 subunit theta
#=GS E2A4E1/35-69_328-446  DR GENE3D; c248a44c9accbe0d318065d8f09d9081/35-69_328-446; 
#=GS E2A4E1/35-69_328-446  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Formicinae; Camponotini; Camponotus; Camponotus floridanus; 
#=GS H3AF79/136-254        AC H3AF79
#=GS H3AF79/136-254        OS Latimeria chalumnae
#=GS H3AF79/136-254        DE Uncharacterized protein
#=GS H3AF79/136-254        DR GENE3D; ddb9c89a560c684d17a0a75cc6451204/136-254; 
#=GS H3AF79/136-254        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Coelacanthiformes; Coelacanthidae; Latimeria; Latimeria chalumnae; 
#=GS Q6EE46/172-286        AC Q6EE46
#=GS Q6EE46/172-286        OS Scyliorhinus canicula
#=GS Q6EE46/172-286        DE Chaperonin-containing subunit 8 theta
#=GS Q6EE46/172-286        DR GENE3D; c6604371edb9c4dc7a4fb8348a97680c/172-286; 
#=GS Q6EE46/172-286        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Chondrichthyes; Elasmobranchii; Selachii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus; Scyliorhinus canicula; 
#=GS Q9XSG6/43-161         AC Q9XSG6
#=GS Q9XSG6/43-161         OS Bos taurus
#=GS Q9XSG6/43-161         DE Cctq
#=GS Q9XSG6/43-161         DR GENE3D; f47c8c567aa5b287336056542ea35615/43-161; 
#=GS Q9XSG6/43-161         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GF TC 211.4 9.6E-66
#=GF SQ 20
Q7K3J0/371-539                ---RIATVVIRGATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAGGPKVRQA----
T1JMI0/390-558                ------TVVIRGSTDNLMDDIERAVNDGVNTFKVLHRDGRLVPGAGATEIELAKQISTFGETCPGLEQYAIKSFATALEMLPKTLAENAGLKTTEMLSKLYAMHN-EGKGNYGVDIGNETTMVKDVTEDDIYDLYLGKYWGMKYATSAACTILKVDQIIMAKPAGGPKPRDNPNKD
B4P3D7/371-542                ---RIATVVIRGATDNFMDDIERALDDAVNNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTDIVNQLYLAHNSEAGKTIGFDIEAEKASTIDTTKAKLFDLYQAKFWGLKYAVGAAATILKVDQIIMAKRAGGPKPRQAAGS-
Q6EEA2/139-294                EDSSISTIVIRGSTDNLMDDIERAVDDGVNTFKVLVRDKRLVPGGGATEIELSKQITSYGETCPGLDQYAIKKFAEAFEAIPRALADNSGVNSNEILSKLHAVHQ-EGNKNVGFDIESESAAVKDMLECGVLEPYLLKHWGIKLATNAAVTVLRVDQ-------------------
B4QGA3/371-540                ---RIATVVIRGATDNFMDDIERALDDAVNNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNTEAGKTIGFDIDAEKASTIDTTKAKLFDLYQAKFWGLKYAVGAAATILKVDQIIMAKRAGGPKVRQPA---
B4LNN4/373-542                -----ATIVIRGATDNFMDDIERAMDDGVNNFKSLTRDGRFLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGSNGTDIVNQLYLAHNSEKGKNIGFDIEAEKATTLDAVEAKLFDLYQAKFWGLKYAVSAAATILKVDQIIMAKRAGGPKPRQAAGS-
B4JVE5/370-542                --SRISTIVIRGATDNFMDDIERALDDGVNNFKCLTRDGRYLPGAGATEIELATQLAAYADTLPGLDQYAVRKFATALEVFPKALAENSGTNGTEIVNQLYLAHNSPKGKNIGYDIEAEKPTTIDVTEAKLFDLYQAKYWGLKYAVGAAGTILKVDQIIMAKRAGGPKPRQAAGS-
B4GCT8/371-542                ---RIATVVIRGATDNFMDDIERALDDAVNSFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLEQYSVRKFAQALEVFPKALAENSGFNGTEAVNLLYLAHNSESGKNIGFDIEAETASTIDAAKAKIFDLYQGKFWGLKYAVGAATTILKVDQIIMAKRAGGPKPRQAAGS-
A0A0M4E3Z2/406-577            ---RISTIVIRGATDNFMDDIERALDDGINTFKCLTRDGRFVPGAGATEIELATQLAAYADTLPGLDQYAVRKFATALEVFPKALAENSGSNGTDIVNQLYLAHNSEQGKNMGYDIEAEKATTIDTVSAKLYDLYQAKFWGLKYAVGAAATILKVDQIIMAKRAGGPKPRQAAGS-
Q28Y76/371-542                ---RIATVVIRGATDNFMDDIERALDDAVNSFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLEQYSVRKFAQALEVFPKALSENSGFNGTEAVNLLYLAHNSESGKNIGFDIEAETASTIDAAKAKIFDLYQGKFWGLKYAVGAATTILKVDQIIMAKRAGGPKPRQAAGS-
A0A0L0C5U2/382-552            -----ATIVVRGATDNFMDDIERAIDDGVNNFKCLSRDGRYVPGAGAVEIELATQIAAYADTLPGLEQYAVRRFATALEAFPKALAENTGINGTEIVNQLYLAHKEEAGKNVGLNIEAEKAETYDVASNKIYDLYQAKYWGIKYAVGAANTILKVDQIIMAKRAGGPKPRQNAGSD
B4HSA8/371-540                ---RIATVVIRGATDNFMDDIERALDDAVNNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNTEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAGGPKLRQPA---
B4MQW0/370-542                --SRIATIVIRGATDNFMDDIERALDDAVNNFKCLSRDGRYLPGAGATEIELAVQLSAYADTLPGLEQYAVRKFANALEVFPKALAENSGTNGTEIVNQLYLAHNSESGKNTGYDIESEKVNTVDTVKSKIFDLYQSKFWGLKYAVGAATTILKVDQIIMAKRAGGPKPRQAAGS-
B3N850/371-542                ---RIATVVIRGATDNFMDDIERALDDAVNNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTDIVNQLYLAHNSEAGKTIGFDIEAEKASTIDTTKAKIFDLYQAKFWGLKYAVGAAATILKVDQIIMAKRAGGPKPRQAAGS-
B3MFD3/371-542                ---RIATVVIRGATDNFMDDIERALDDGVNNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLEQYAVRKFANALEVFPKALAENSGVNGTEIVNQLYLAHNSESGKTIGFDIESEKASTIDTTKAKLFDLYQAKFWGLKYAVGAATTILKVDQIIMAKRAGGPKPRQAAGS-
G5DY13/123-241                ---------------------------------------RLVPGGGATEIELAKQITSYGETCPGLDQYAIKKFAEAFESIPRALAENTGVKPNEIISKLYAMHQ-EGNKNVGFDIESESAAVKDMLESNVVDPYLVKHWGIKLATNAAITVLRVDQII-----------------
E2A4E1/35-69_328-446          ACKQFADTGI--TTSEIVEGYESALNKALEILPTLVV--RFVPGAGATELELAAQLALYADTLPGLEQYAARKFATALEIFSKTLAESSGVHASELLSKLYAAHK-EGKKNYGFDIDGEGAALIDTVEAGILDLYLTKQWAMKYAVGAACTVLKVDQII-----------------
H3AF79/136-254                ---------------------------------------RLVPGGGATEIDLAKQITSYGETCPGLEQYAIKKFAEAFESVPRALAENSGVKTNEVISKMYAVHQ-EGNRNIGFDIEGEGAAVKDMLEAGILDSYLVKHWGIKLATNAAVTVLRVDQII-----------------
Q6EE46/172-286                ---------------------------------------RCLPGAGATEIELAERITTYGESCPGLEQYGIKKFAEAFESIPQALAANSGIRANEIISKLYAVHQ-EGNKNIGFDIEGEGSGLKDMLEAGILDPYLVKYWGIKLATNAAVTVLRV---------------------
Q9XSG6/43-161                 ---------------------------------------RLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQ-EGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQII-----------------
#=GC scorecons                00012232333334333333343433323323324233295699699898898486558678499979976779949694586798787955458666588559518457759689759364549445646585954959769595599497979776622222222212212110
#=GC scorecons_70             _______________________________________*_************_**__*_**_************_***__*********____**___**__*__*__**_*****_*_____*_______*_*__*_**_*_*__**_*********_________________
#=GC scorecons_80             _______________________________________*__**_********_*___*__*_***_***__***_*_*__*_*******____*____**__*__*__*__*_***_*_____*_______*_*__*_**_*_*__**_*_*****___________________
#=GC scorecons_90             _______________________________________*__**_********_*___*__*_***_**____**_*_*__*__**_*_*_________**__*__*_____*_**__*_____*_______*_*__*_*__*_*__**_*_*_*_____________________
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