# STOCKHOLM 1.0
#=GF ID 1.10.472.10/FF/9895
#=GF DE CTD kinase subunit beta
#=GF AC 1.10.472.10/FF/9895
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 64.155
#=GS P46962/7-145      AC P46962
#=GS P46962/7-145      OS Saccharomyces cerevisiae S288C
#=GS P46962/7-145      DE CTD kinase subunit beta
#=GS P46962/7-145      DR GENE3D; 6545a1f2e2ed137ef04c1a1dfc9c3501/7-145; 
#=GS P46962/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P46962/7-145      DR GO; GO:0005515; GO:0005634; GO:0005654; GO:0005730; GO:0005829; GO:0006468; GO:0032786; GO:0045903; GO:0045943; GO:0070692; 
#=GS O59748/8-151      AC O59748
#=GS O59748/8-151      OS Schizosaccharomyces pombe 972h-
#=GS O59748/8-151      DE CTD kinase subunit beta
#=GS O59748/8-151      DR GENE3D; 87e42ee06e730aa70cf121df9ec7d2f8/8-151; 
#=GS O59748/8-151      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O59748/8-151      DR GO; GO:0005634; GO:0005737; GO:0005829; GO:0019908; GO:0036278; GO:0061575; GO:0070692; GO:0071619; GO:1904788; GO:2001165; 
#=GS J5RK56/26-164     AC J5RK56
#=GS J5RK56/26-164     OS Saccharomyces kudriavzevii IFO 1802
#=GS J5RK56/26-164     DE CTK2-like protein
#=GS J5RK56/26-164     DR GENE3D; 2b78d5a401ebe63f2ac7b599d3d9c113/26-164; 
#=GS J5RK56/26-164     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS A0A0L8RGM0/7-145  AC A0A0L8RGM0
#=GS A0A0L8RGM0/7-145  OS Saccharomyces eubayanus
#=GS A0A0L8RGM0/7-145  DE CTK2-like protein
#=GS A0A0L8RGM0/7-145  DR GENE3D; 2dcc1027cdefbfbf737785f6e5336616/7-145; 
#=GS A0A0L8RGM0/7-145  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS J8Q2Y3/7-145      AC J8Q2Y3
#=GS J8Q2Y3/7-145      OS Saccharomyces arboricola H-6
#=GS J8Q2Y3/7-145      DE Ctk2p
#=GS J8Q2Y3/7-145      DR GENE3D; 3c4e7a3d5931c4a8b93cb52473a1eec6/7-145; 
#=GS J8Q2Y3/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS G2WH04/7-145      AC G2WH04
#=GS G2WH04/7-145      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WH04/7-145      DE K7_Ctk2p
#=GS G2WH04/7-145      DR GENE3D; 51829067d439af1fcd0f835b6bdd6536/7-145; 
#=GS G2WH04/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8VMW6/7-145  AC A0A0L8VMW6
#=GS A0A0L8VMW6/7-145  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VMW6/7-145  DE CTK2p Beta subunit of C-terminal domain kinase I (CTDK-I)
#=GS A0A0L8VMW6/7-145  DR GENE3D; 6545a1f2e2ed137ef04c1a1dfc9c3501/7-145; 
#=GS A0A0L8VMW6/7-145  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS C8ZBK5/7-145      AC C8ZBK5
#=GS C8ZBK5/7-145      OS Saccharomyces cerevisiae EC1118
#=GS C8ZBK5/7-145      DE Ctk2p
#=GS C8ZBK5/7-145      DR GENE3D; 6545a1f2e2ed137ef04c1a1dfc9c3501/7-145; 
#=GS C8ZBK5/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P0Z2/7-145      AC N1P0Z2
#=GS N1P0Z2/7-145      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P0Z2/7-145      DE Ctk2p
#=GS N1P0Z2/7-145      DR GENE3D; 6545a1f2e2ed137ef04c1a1dfc9c3501/7-145; 
#=GS N1P0Z2/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GV40/7-145      AC C7GV40
#=GS C7GV40/7-145      OS Saccharomyces cerevisiae JAY291
#=GS C7GV40/7-145      DE Ctk2p
#=GS C7GV40/7-145      DR GENE3D; 6545a1f2e2ed137ef04c1a1dfc9c3501/7-145; 
#=GS C7GV40/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7KQ86/7-145      AC E7KQ86
#=GS E7KQ86/7-145      OS Saccharomyces cerevisiae Lalvin QA23
#=GS E7KQ86/7-145      DE Ctk2p
#=GS E7KQ86/7-145      DR GENE3D; 6545a1f2e2ed137ef04c1a1dfc9c3501/7-145; 
#=GS E7KQ86/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZPW1/7-140      AC A6ZPW1
#=GS A6ZPW1/7-140      OS Saccharomyces cerevisiae YJM789
#=GS A6ZPW1/7-140      DE RNA polymerase II C-terminal domain kinase beta subunit
#=GS A6ZPW1/7-140      DR GENE3D; 70a0240b4415707d7a22c0443744bdd8/7-140; 
#=GS A6ZPW1/7-140      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7KEC9/7-140      AC E7KEC9
#=GS E7KEC9/7-140      OS Saccharomyces cerevisiae AWRI796
#=GS E7KEC9/7-140      DE Ctk2p
#=GS E7KEC9/7-140      DR GENE3D; 71a1852cbfb7d281bef3dc3e04b1c8f4/7-140; 
#=GS E7KEC9/7-140      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LQ93/7-145      AC B3LQ93
#=GS B3LQ93/7-145      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LQ93/7-145      DE CTD kinase beta subunit
#=GS B3LQ93/7-145      DR GENE3D; e9c64640badf853fd36e008774238b38/7-145; 
#=GS B3LQ93/7-145      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GWW9/50-151     AC H0GWW9
#=GS H0GWW9/50-151     OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GWW9/50-151     DE Ctk2p
#=GS H0GWW9/50-151     DR GENE3D; ebf47718772489304108c3045c1b0185/50-151; 
#=GS H0GWW9/50-151     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GF TC 191.7 3.1E-60
#=GF SQ 15
P46962/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
O59748/8-151              VLSIRMSHPYYSEKEISRILSTR--DPKE-NNLRMQAFAWISTLSKTLKFPVRTSGLAMLLYSRFQLFFPVNEIPLLECATACLVVASKIEDTAKKFRDILLAHYLQKHPGSEVDAHSQVCYKLIEENKKRILGLERMTLELICFDF
J5RK56/26-164             T-QLFFSRPFLSKRQIQRAQRNTIPDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYYLFNRFETELCYTVATSCLTLGCKEVETIKKINDICTLSLRLRNV-------VKINAEILENFKKRVFQIELRILESCSFDY
A0A0L8RGM0/7-145          T-QLFFSRPFLSKRQIQRAHKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETELCYTVATSCLTLSCKEVETIKKANEICTLSLHLRNV-------VKINTEILENFKKRVFQIELRILESCSFDY
J8Q2Y3/7-145              T-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDSCVQLKFPRKTLETAVYFYQRYHLFNRYETEVCYIVATSCLTLGCKEVETIKKTNDICSLSLRLRNV-------VKINTEILENFKKRVFQIELRILESCSFDY
G2WH04/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
A0A0L8VMW6/7-145          S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
C8ZBK5/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
N1P0Z2/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
C7GV40/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
E7KQ86/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
A6ZPW1/7-140              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILES-----
E7KEC9/7-140              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILES-----
B3LQ93/7-145              S-QLFFSRPFLSKRQIQRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNV-------VKINTDILENFKKRVFQIELRILESCSFDY
H0GWW9/50-151             -------------------------DYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYYLFNRFETELCYTVATSCLTLGCKEVETIKKINDICTLSLRLRNV-------VKINAEILENFKKKSIS-------------
#=GC scorecons            303433646436444636333432295764965775695569586559999579565965695975995556554555599699666695579699468955555457650000000567545669659975544633466322443
#=GC scorecons_70         _________________________*_**_*__**_**__**_**__****_**_*_**_**_**_**___*_______*****_*_**__**_**__**_______**_________**___****_***________________
#=GC scorecons_80         _________________________*_*__*__*___*___*_*___****_**___*___*_**_**___________**_**____*__**_**__**_______*___________*_____*__***________________
#=GC scorecons_90         _________________________*____*______*___*_*___****__*___*___*_*__**___________**_**____*___*_**__**_________________________*__**_________________
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