# STOCKHOLM 1.0
#=GF ID 1.10.472.10/FF/9347
#=GF DE Cyclin J, isoform A
#=GF AC 1.10.472.10/FF/9347
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 46.117
#=GS Q24159/61-170  AC Q24159
#=GS Q24159/61-170  OS Drosophila melanogaster
#=GS Q24159/61-170  DE Cyclin J
#=GS Q24159/61-170  DR GENE3D; a0882c6651ef34a708dd025516859721/61-170; 
#=GS Q24159/61-170  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q24159/61-170  DR GO; GO:0000278; GO:0005515; GO:0007293; GO:0016538; GO:0045448; GO:0060966; 
#=GS Q95U62/61-163  AC Q95U62
#=GS Q95U62/61-163  OS Drosophila melanogaster
#=GS Q95U62/61-163  DE Cyclin J, isoform B
#=GS Q95U62/61-163  DR GENE3D; 12793d8e96efa73c8f784ff78914cc48/61-163; 
#=GS Q95U62/61-163  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q95U62/61-163  DR GO; GO:0000278; GO:0007293; GO:0016538; GO:0045448; GO:0060966; 
#=GS Q9VZP3/56-165  AC Q9VZP3
#=GS Q9VZP3/56-165  OS Drosophila melanogaster
#=GS Q9VZP3/56-165  DE Cyclin J, isoform A
#=GS Q9VZP3/56-165  DR GENE3D; e3ebef250faa42cb345229769ba329cf/56-165; 
#=GS Q9VZP3/56-165  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VZP3/56-165  DR GO; GO:0000278; GO:0007293; GO:0016538; GO:0045448; GO:0060966; 
#=GS B4HTS2/56-165  AC B4HTS2
#=GS B4HTS2/56-165  OS Drosophila sechellia
#=GS B4HTS2/56-165  DE GM14576
#=GS B4HTS2/56-165  DR GENE3D; 340cfa450b48fcdc9dec02be4b345f69/56-165; 
#=GS B4HTS2/56-165  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4PH40/61-165  AC B4PH40
#=GS B4PH40/61-165  OS Drosophila yakuba
#=GS B4PH40/61-165  DE Uncharacterized protein, isoform A
#=GS B4PH40/61-165  DR GENE3D; b3afa14880a49b8e9a2f53265a1e2414/61-165; 
#=GS B4PH40/61-165  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B3NBX1/56-165  AC B3NBX1
#=GS B3NBX1/56-165  OS Drosophila erecta
#=GS B3NBX1/56-165  DE Uncharacterized protein, isoform A
#=GS B3NBX1/56-165  DR GENE3D; f0b34a5bdd79891b3c83a1be050b6ac9/56-165; 
#=GS B3NBX1/56-165  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B3M828/53-164  AC B3M828
#=GS B3M828/53-164  OS Drosophila ananassae
#=GS B3M828/53-164  DE Uncharacterized protein
#=GS B3M828/53-164  DR GENE3D; e534c9e5bf5cb3a910e324007dfdab02/53-164; 
#=GS B3M828/53-164  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4QPJ4/61-154  AC B4QPJ4
#=GS B4QPJ4/61-154  OS Drosophila simulans
#=GS B4QPJ4/61-154  DE GD13768
#=GS B4QPJ4/61-154  DR GENE3D; 77f3f1e7d1de715a706ee4b65278fd1d/61-154; 
#=GS B4QPJ4/61-154  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF TC 200.6 2.2E-63
#=GF SQ 8
Q24159/61-170          --PLFYLSPQLNERRRMLQLLKLATSAHKLSRLALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLNFELI
Q95U62/61-163          -------SPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLNFE--
Q9VZP3/56-165          --PLFYLSPQLNERRRMLQLLKLATSAHKLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTDAFIPRYSEMNRLVKNAYTAFEYKAVERKILCFLNFELI
B4HTS2/56-165          --PFFYLSPQLNERRRMLQLLKLATSTHKLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTEAFIPRYCEMNQLVKNSYTAFEYKAVERKILCFLNFELI
B4PH40/61-165          -------SPQLSERQRMLQLLKLATRAHKLSRCALHLAVYYMDRFVDHYKIRPDKLFLVAITCLHIAAQIENTDAFIPHYSEMNRMVKNAYTAFEYKAVERKILCFLNFELV
B3NBX1/56-165          --PMFFLSPQLSERQRMLQLLKLVTRAHKLSRCALHLAVYYMDRFVDHYKIRPDKLLLVAITCLHIAAQIENTDAFIPHYSEMNRMVKNAYTAFEYKAVERKILCFLNFELV
B3M828/53-164          RRPMFFLSTQLDQRQKMVYIMQTATRAHKLSRCALHLGLYYMDRFLDYYRIRPDKLQLVALTCLHIAAQIENADACIPRYSEMNELVKNAYTAFEYKAVERKILCFMEFELV
B4QPJ4/61-154          -------SPQLNERRRMLQLLKLATSTHKLSRCALHLAVYYMDRFVDYYKIRPDKLLLVAITCLHIAAQIENTEAFIPRYCEMNQLVKNAYTAFEYKLWKG-----------
#=GC scorecons         0021222979957967976777679569999979999779999997979799999959997999999999997796997969995799979999999656655555445543
#=GC scorecons_70      _______****_*************_******************************_***************************_*************_**___________
#=GC scorecons_80      _______*_**_**_***_***_**__**********_******************_******************_**_*_***_************_______________
#=GC scorecons_90      _______*_**__*__*_______*__*****_****__******_*_*_******_***_***********__*_**_*_***__***_*******_______________
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