# STOCKHOLM 1.0
#=GF ID 1.10.375.10/FF/808
#=GF DE Gag polyprotein
#=GF AC 1.10.375.10/FF/808
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 35.272
#=GS Q82851/134-266  AC Q82851
#=GS Q82851/134-266  OS Jembrana disease virus
#=GS Q82851/134-266  DE Gag-Pol polyprotein
#=GS Q82851/134-266  DR GENE3D; a23516151fb2ac760583189484a6b88b/134-266; 
#=GS Q82851/134-266  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS Q82851/134-266  DR EC; 2.7.7.49; 2.7.7.7; 3.1.13.2; 3.1.26.13; 
#=GS P19560/150-287  AC P19560
#=GS P19560/150-287  OS Bovine immunodeficiency virus R29
#=GS P19560/150-287  DE Gag-Pol polyprotein
#=GS P19560/150-287  DR GENE3D; fe9ac721045e55fe714215e1692bcebb/150-287; 
#=GS P19560/150-287  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS P19560/150-287  DR EC; 2.7.7.49; 2.7.7.7; 3.1.13.2; 3.1.26.13; 
#=GS P19558/150-288  AC P19558
#=GS P19558/150-288  OS Bovine immunodeficiency virus R29
#=GS P19558/150-288  DE Gag polyprotein
#=GS P19558/150-288  DR GENE3D; 72a1bfd2dd641d29fc8f84772e9f665e/150-288; 
#=GS P19558/150-288  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS Q82850/134-265  AC Q82850
#=GS Q82850/134-265  OS Jembrana disease virus
#=GS Q82850/134-265  DE Gag polyprotein
#=GS Q82850/134-265  DR GENE3D; 76e73157192d9e22db6bf881d1d4481e/134-265; 
#=GS Q82850/134-265  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS A6ZI35/1-122    AC A6ZI35
#=GS A6ZI35/1-122    OS Bovine immunodeficiency virus
#=GS A6ZI35/1-122    DE Gag protein
#=GS A6ZI35/1-122    DR GENE3D; b8418ce7ded6e480ee2aaa259f7d7c9a/1-122; 
#=GS A6ZI35/1-122    DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS A6ZI36/1-122    AC A6ZI36
#=GS A6ZI36/1-122    OS Bovine immunodeficiency virus
#=GS A6ZI36/1-122    DE Gag protein
#=GS A6ZI36/1-122    DR GENE3D; b8418ce7ded6e480ee2aaa259f7d7c9a/1-122; 
#=GS A6ZI36/1-122    DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS A6ZI37/1-122    AC A6ZI37
#=GS A6ZI37/1-122    OS Bovine immunodeficiency virus
#=GS A6ZI37/1-122    DE Gag protein
#=GS A6ZI37/1-122    DR GENE3D; b8418ce7ded6e480ee2aaa259f7d7c9a/1-122; 
#=GS A6ZI37/1-122    DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GF TC 260.5 6.4E-82
#=GF SQ 7
Q82851/134-266          AVSTSDGSPRYDPDLTKQLKIWADATEKHGVDHHAVNILGVITANLTQSEIRLLLQSTPQWRLDIQLIESKLNAREHAHRVWKESHPEAPKTDEIIGKGLTAAEQATLTTQECRDTYRQWVLEAALEVAQGKH---------
P19560/150-287          AITTQDGTPRFDPDLMKQLKIWSDATERNGVDLHAVNILGVITANLVQEEIKLLLNSTPKWRLDVQLIESKVREKENAHRTWKQHHPEAPKTDEIIGKGLSSAEQATLISVECRETFRQWVLQAAMEVAQAKHATPGP----
P19558/150-288          AITTQDGTPRFDPDLMKQLKIWSDATERNGVDLHAVNILGVITANLVQEEIKLLLNSTPKWRLDVQLIESKVREKENAHRTWKQHHPEAPKTDEIIGKGLSSAEQATLISVECRETFRQWVLQAAMEVAQAKHATPGPI---
Q82850/134-265          AVSTSDGSPRYDPDLTKQLKIWADATEKHGVDHHAVNILGVITANLTQSEIRLLLQSTPQWRLDIQLIESKLNAREHAHRVWKESHPEAPKTDEIIGKGLTAAEQATLTTQECRDTYRQWVLEAALEVAQGK----------
A6ZI35/1-122            --------------------IWSDATERNGIDLHAVNILGVITANLVQEEIKLLLNSTPKWRLDVQLIESKVREKENAHRTWKQHHPEAPKTDEIIGKGLSSAEQATLISVECRETFRQWVLQAAMEVAQAKHATPGPINIH
A6ZI36/1-122            --------------------IWSDATERNGIDLHAVNILGVITANLVQEEIKLLLNSTPKWRLDVQLIESKVREKENAHRTWKQHHPEAPKTDEIIGKGLSSAEQATLISVECRETFRQWVLQAAMEVAQAKHATPGPINIH
A6ZI37/1-122            --------------------IWSDATERNGIDLHAVNILGVITANLVQEEIKLLLNSTPKWRLDVQLIESKVREKENAHRTWKQHHPEAPKTDEIIGKGLSSAEQATLISVECRETFRQWVLQAAMEVAQAKHATPGPINIH
#=GC scorecons          2212122122222221222299699997696959999999999999595997999599969999799999965579699959965999999999999999669999996649997979999969969999695333332111
#=GC scorecons_70       ____________________**_*****_***_*************_*_******_****************__**_***_***_***************__******___*******************_*__________
#=GC scorecons_80       ____________________**_****__*_*_*************_*_**_***_***_****_******____*_***_**__***************__******___***_*******_**_****_*__________
#=GC scorecons_90       ____________________**_****__*_*_*************_*_**_***_***_****_******____*_***_**__***************__******___***_*_*****_**_****_*__________
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