# STOCKHOLM 1.0
#=GF ID 1.10.357.10/FF/933
#=GF DE HTH-type transcriptional regulator TtgR
#=GF AC 1.10.357.10/FF/933
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 2.258
#=GS 2uxhA00/1-210     AC Q9AIU0
#=GS 2uxhA00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxhA00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxhA00/1-210     DR CATH; 2uxh; A:5-210; 
#=GS 2uxhA00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxhA00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2xdnA00/1-210     AC Q9AIU0
#=GS 2xdnA00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2xdnA00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2xdnA00/1-210     DR CATH; 2xdn; A:5-210; 
#=GS 2xdnA00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2xdnA00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxhB00/1-210     AC Q9AIU0
#=GS 2uxhB00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxhB00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxhB00/1-210     DR CATH; 2uxh; B:6-210; 
#=GS 2uxhB00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxhB00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxiA00/1-210     AC Q9AIU0
#=GS 2uxiA00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxiA00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxiA00/1-210     DR CATH; 2uxi; A:5-210; 
#=GS 2uxiA00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxiA00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxiB00/1-210     AC Q9AIU0
#=GS 2uxiB00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxiB00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxiB00/1-210     DR CATH; 2uxi; B:6-210; 
#=GS 2uxiB00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxiB00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxoA00/1-210     AC Q9AIU0
#=GS 2uxoA00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxoA00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxoA00/1-210     DR CATH; 2uxo; A:5-210; 
#=GS 2uxoA00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxoA00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxoB00/1-210     AC Q9AIU0
#=GS 2uxoB00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxoB00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxoB00/1-210     DR CATH; 2uxo; B:6-210; 
#=GS 2uxoB00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxoB00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxpA00/1-210     AC Q9AIU0
#=GS 2uxpA00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxpA00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxpA00/1-210     DR CATH; 2uxp; A:5-210; 
#=GS 2uxpA00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxpA00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxpB00/1-210     AC Q9AIU0
#=GS 2uxpB00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxpB00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxpB00/1-210     DR CATH; 2uxp; B:6-210; 
#=GS 2uxpB00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxpB00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxuA00/1-210     AC Q9AIU0
#=GS 2uxuA00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxuA00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxuA00/1-210     DR CATH; 2uxu; A:5-210; 
#=GS 2uxuA00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxuA00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2uxuB00/1-210     AC Q9AIU0
#=GS 2uxuB00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2uxuB00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2uxuB00/1-210     DR CATH; 2uxu; B:6-210; 
#=GS 2uxuB00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2uxuB00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2xdnB00/1-210     AC Q9AIU0
#=GS 2xdnB00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2xdnB00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2xdnB00/1-210     DR CATH; 2xdn; B:6-210; 
#=GS 2xdnB00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2xdnB00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2xdnC00/1-210     AC Q9AIU0
#=GS 2xdnC00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2xdnC00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2xdnC00/1-210     DR CATH; 2xdn; C:5-210; 
#=GS 2xdnC00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2xdnC00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS 2xdnD00/1-210     AC Q9AIU0
#=GS 2xdnD00/1-210     OS Pseudomonas putida DOT-T1E
#=GS 2xdnD00/1-210     DE HTH-type transcriptional regulator TtgR
#=GS 2xdnD00/1-210     DR CATH; 2xdn; D:6-210; 
#=GS 2xdnD00/1-210     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS 2xdnD00/1-210     DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS Q9AIU0/1-210      AC Q9AIU0
#=GS Q9AIU0/1-210      OS Pseudomonas putida DOT-T1E
#=GS Q9AIU0/1-210      DE HTH-type transcriptional regulator TtgR
#=GS Q9AIU0/1-210      DR GENE3D; 565138dd35eebdf76237e9c0b48f4152/1-210; 
#=GS Q9AIU0/1-210      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS Q9AIU0/1-210      DR GO; GO:0000976; GO:0001217; GO:0032993; 
#=GS Q9KJC4/1-210      AC Q9KJC4
#=GS Q9KJC4/1-210      OS Pseudomonas putida
#=GS Q9KJC4/1-210      DE Probable HTH-type transcriptional regulator ArpR
#=GS Q9KJC4/1-210      DR GENE3D; dfe2aa080ce27278324c60fdd79646cf/1-210; 
#=GS Q9KJC4/1-210      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A1N6ZEW9/1-210  AC A0A1N6ZEW9
#=GS A0A1N6ZEW9/1-210  OS Pseudomonas putida
#=GS A0A1N6ZEW9/1-210  DE Transcriptional regulator, TetR family
#=GS A0A1N6ZEW9/1-210  DR GENE3D; dfe2aa080ce27278324c60fdd79646cf/1-210; 
#=GS A0A1N6ZEW9/1-210  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A0A7PWX5/1-210  AC A0A0A7PWX5
#=GS A0A0A7PWX5/1-210  OS Pseudomonas putida S12
#=GS A0A0A7PWX5/1-210  DE TetR family transcriptional regulator
#=GS A0A0A7PWX5/1-210  DR GENE3D; dfe2aa080ce27278324c60fdd79646cf/1-210; 
#=GS A0A0A7PWX5/1-210  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS Q88N29/1-210      AC Q88N29
#=GS Q88N29/1-210      OS Pseudomonas putida KT2440
#=GS Q88N29/1-210      DE Probable HTH-type transcriptional regulator TtgR
#=GS Q88N29/1-210      DR GENE3D; dfe2aa080ce27278324c60fdd79646cf/1-210; 
#=GS Q88N29/1-210      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GF TC 0.0 0.0E+00
#=GF SQ 19
2uxhA00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2xdnA00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLAETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxhB00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxiA00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxiB00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxoA00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxoB00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxpA00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxpB00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxuA00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2uxuB00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2xdnB00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLAETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2xdnC00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLAETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
2xdnD00/1-210             MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLAETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
Q9AIU0/1-210              MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
Q9KJC4/1-210              MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDELDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDVERAAVAMFAYVDGLIGRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
A0A1N6ZEW9/1-210          MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDELDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDVERAAVAMFAYVDGLIGRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
A0A0A7PWX5/1-210          MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDELDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDVERAAVAMFAYVDGLIGRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
Q88N29/1-210              MVRRTKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDELDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDVERAAVAMFAYVDGLIGRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
#=GC scorecons            999999999999999999999999999999999999999999999999999999999999999999699999999999999969999999999999999999999999999999999999999999999999999999999999999999999999999699999999999999959999999999999999999999999999999999
#=GC scorecons_70         ******************************************************************_********************************************************************************************_***************_**********************************
#=GC scorecons_80         ******************************************************************_***************_****************************************************************************_***************_**********************************
#=GC scorecons_90         ******************************************************************_***************_****************************************************************************_***************_**********************************
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