# STOCKHOLM 1.0
#=GF ID 1.10.357.10/FF/35899
#=GF DE HTH-type transcriptional regulator TcmR
#=GF AC 1.10.357.10/FF/35899
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 62.444
#=GS I6XVZ9/56-192      AC I6XVZ9
#=GS I6XVZ9/56-192      OS Mycobacterium tuberculosis H37Rv
#=GS I6XVZ9/56-192      DE TetR family transcriptional regulator
#=GS I6XVZ9/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS I6XVZ9/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WMB7/56-192      AC P9WMB7
#=GS P9WMB7/56-192      OS Mycobacterium tuberculosis H37Rv
#=GS P9WMB7/56-192      DE Putative mycofactocin biosynthesis transcriptional regulator MftR
#=GS P9WMB7/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS P9WMB7/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A1E3SBI8/56-191  AC A0A1E3SBI8
#=GS A0A1E3SBI8/56-191  OS Mycobacterium intermedium
#=GS A0A1E3SBI8/56-191  DE Mycofactocin system transcriptional regulator
#=GS A0A1E3SBI8/56-191  DR GENE3D; 6b2ab0c552fc2d7a227d9089140bd3a0/56-191; 
#=GS A0A1E3SBI8/56-191  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium intermedium; 
#=GS A0A0U0SVT9/1-104   AC A0A0U0SVT9
#=GS A0A0U0SVT9/1-104   OS Mycobacterium tuberculosis
#=GS A0A0U0SVT9/1-104   DE Transcriptional regulatory protein
#=GS A0A0U0SVT9/1-104   DR GENE3D; 7d0b5ff236bac24cafcfb7ff21fd73d9/1-104; 
#=GS A0A0U0SVT9/1-104   DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A197J1F7/56-192  AC A0A197J1F7
#=GS A0A197J1F7/56-192  OS Mycobacterium mungi
#=GS A0A197J1F7/56-192  DE Mycofactocin system transcriptional regulator
#=GS A0A197J1F7/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A197J1F7/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium mungi; 
#=GS A0A0H3M2U8/56-192  AC A0A0H3M2U8
#=GS A0A0H3M2U8/56-192  OS Mycobacterium bovis BCG str. Pasteur 1173P2
#=GS A0A0H3M2U8/56-192  DE Probable transcriptional regulatory protein
#=GS A0A0H3M2U8/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A0H3M2U8/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS R4LZS8/56-192      AC R4LZS8
#=GS R4LZS8/56-192      OS Mycobacterium tuberculosis str. Haarlem/NITR202
#=GS R4LZS8/56-192      DE Transcriptional regulatory protein
#=GS R4LZS8/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS R4LZS8/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WMB6/56-192      AC P9WMB6
#=GS P9WMB6/56-192      OS Mycobacterium tuberculosis CDC1551
#=GS P9WMB6/56-192      DE Putative mycofactocin biosynthesis transcriptional regulator MftR
#=GS P9WMB6/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS P9WMB6/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A120IVQ7/56-192  AC A0A120IVQ7
#=GS A0A120IVQ7/56-192  OS Mycobacterium microti
#=GS A0A120IVQ7/56-192  DE Mycofactocin biosynthesis transcriptional regulator MftR
#=GS A0A120IVQ7/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A120IVQ7/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium microti; 
#=GS A0A1L7FJB0/56-192  AC A0A1L7FJB0
#=GS A0A1L7FJB0/56-192  OS Mycobacterium caprae
#=GS A0A1L7FJB0/56-192  DE Mycofactocin system transcriptional regulator
#=GS A0A1L7FJB0/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A1L7FJB0/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium caprae; 
#=GS A0A045IQX9/56-192  AC A0A045IQX9
#=GS A0A045IQX9/56-192  OS Mycobacterium tuberculosis
#=GS A0A045IQX9/56-192  DE Mycofactocin system transcriptional regulator
#=GS A0A045IQX9/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A045IQX9/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A120IZX7/56-192  AC A0A120IZX7
#=GS A0A120IZX7/56-192  OS Mycobacterium africanum
#=GS A0A120IZX7/56-192  DE Mycofactocin biosynthesis transcriptional regulator MftR
#=GS A0A120IZX7/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A120IZX7/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium africanum; 
#=GS A0A0H3P2Q9/56-192  AC A0A0H3P2Q9
#=GS A0A0H3P2Q9/56-192  OS Mycobacterium bovis AF2122/97
#=GS A0A0H3P2Q9/56-192  DE PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN
#=GS A0A0H3P2Q9/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A0H3P2Q9/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS A0A1A9T8D1/56-192  AC A0A1A9T8D1
#=GS A0A1A9T8D1/56-192  OS Mycobacterium bovis
#=GS A0A1A9T8D1/56-192  DE Transcriptional regulator
#=GS A0A1A9T8D1/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A1A9T8D1/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS R4MDY7/56-192      AC R4MDY7
#=GS R4MDY7/56-192      OS Mycobacterium tuberculosis CAS/NITR204
#=GS R4MDY7/56-192      DE Transcriptional regulator
#=GS R4MDY7/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS R4MDY7/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS M8CRP1/56-192      AC M8CRP1
#=GS M8CRP1/56-192      OS Mycobacterium orygis 112400015
#=GS M8CRP1/56-192      DE Transcriptional regulatory protein
#=GS M8CRP1/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS M8CRP1/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium orygis; 
#=GS F8M357/56-192      AC F8M357
#=GS F8M357/56-192      OS Mycobacterium africanum GM041182
#=GS F8M357/56-192      DE Putative transcriptional regulatory protein
#=GS F8M357/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS F8M357/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium africanum; 
#=GS A5U077/56-192      AC A5U077
#=GS A5U077/56-192      OS Mycobacterium tuberculosis H37Ra
#=GS A5U077/56-192      DE Putative transcriptional regulatory protein
#=GS A5U077/56-192      DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A5U077/56-192      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A120IND6/56-192  AC A0A120IND6
#=GS A0A120IND6/56-192  OS Mycobacterium bovis BCG
#=GS A0A120IND6/56-192  DE Mycofactocin biosynthesis transcriptional regulator MftR
#=GS A0A120IND6/56-192  DR GENE3D; aa264e316f1bdb1d03b9ad77578c6b82/56-192; 
#=GS A0A120IND6/56-192  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS A0A089XGZ4/70-214  AC A0A089XGZ4
#=GS A0A089XGZ4/70-214  OS Streptomyces glaucescens
#=GS A0A089XGZ4/70-214  DE HTH-type transcriptional regulator TcmR
#=GS A0A089XGZ4/70-214  DR GENE3D; 5234d292319c2425b7b7af9cf2d367b4/70-214; 
#=GS A0A089XGZ4/70-214  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces glaucescens; 
#=GS P39885/70-214      AC P39885
#=GS P39885/70-214      OS Streptomyces glaucescens
#=GS P39885/70-214      DE HTH-type transcriptional regulator TcmR
#=GS P39885/70-214      DR GENE3D; 5234d292319c2425b7b7af9cf2d367b4/70-214; 
#=GS P39885/70-214      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces glaucescens; 
#=GF TC 222.1 2.5E-70
#=GF SQ 21
I6XVZ9/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
P9WMB7/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A1E3SBI8/56-191          SKNAL---PWGDFDTHLDQLRDLLDADDS-----VPLRA---ALRAAL--LAFNTFDECETIRHRQRMRVILQTPELQAYSMTMYAGWREVVAEFVARRTGTK-TTDLLPQTIAWTMLGVALSAYEHWLSDENVTLSEALGSAFDVV--GAG
A0A0U0SVT9/1-104           -------------------------------------------MRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A197J1F7/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A0H3M2U8/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
R4LZS8/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
P9WMB6/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A120IVQ7/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A1L7FJB0/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A045IQX9/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A120IZX7/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A0H3P2Q9/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A1A9T8D1/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
R4MDY7/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
M8CRP1/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
F8M357/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A5U077/56-192              SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A120IND6/56-192          SKNAI---PWGDFSTHLAQLQGLLDNIDSR----IQLRD---ALRAAL--LAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGK-TTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVV--GAG
A0A089XGZ4/70-214          SKEEVALTPISAID------EAFLAALEVRPAGENPLQAMSGAFRAVLGRVRDGELEGVDGALHMAMMRLVERTPGLLAEYLRRSEEMEGRLARIIAAREGVDLDDDFRPRFIVAVFKAVGRVVSREWYLRADTDL-EALSVAFESALDSLR
P39885/70-214              SKEEVALTPISAID------EAFLAALEVRPAGENPLQAMSGAFRAVLGRVRDGELEGVDGALHMAMMRLVERTPGLLAEYLRRSEEMEGRLARIIAAREGVDLDDDFRPRFIVAVFKAVGRVVSREWYLRADTDL-EALSVAFESALDSLR
#=GC scorecons             77445000734444222222445744454600003475400075996900654556765755495559967469969594565555645646965795959450559849657645546964565559545555593999659975600655
#=GC scorecons_70          **______*______________*____________*_____*_**_*__*____**__*___*___****_***_*_*__*__________**_**_*_*_____**_**_*______*_______*_______*_***__***_______
#=GC scorecons_80          ____________________________________________**_*_______________*___**____**_*_*_____________*___*_*_*_____**_*_________*_______*_______*_***__**________
#=GC scorecons_90          ____________________________________________**_*_______________*___**____**_*_*_____________*___*_*_*_____**_*_________*_______*_______*_***__**________
//