# STOCKHOLM 1.0
#=GF ID 1.10.1740.10/FF/8487
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.1740.10/FF/8487
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 12.525
#=GS Q45585/3-108      AC Q45585
#=GS Q45585/3-108      OS Bacillus subtilis subsp. subtilis str. 168
#=GS Q45585/3-108      DE ECF RNA polymerase sigma factor SigW
#=GS Q45585/3-108      DR GENE3D; aec30e12de6e26ab827c492cf736a052/3-108; 
#=GS Q45585/3-108      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A1B2B918/3-108  AC A0A1B2B918
#=GS A0A1B2B918/3-108  OS Bacillus subtilis subsp. subtilis
#=GS A0A1B2B918/3-108  DE RNA polymerase sigma factor
#=GS A0A1B2B918/3-108  DR GENE3D; aec30e12de6e26ab827c492cf736a052/3-108; 
#=GS A0A1B2B918/3-108  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A164W7Q1/3-108  AC A0A164W7Q1
#=GS A0A164W7Q1/3-108  OS Bacillus subtilis
#=GS A0A164W7Q1/3-108  DE RNA polymerase sigma factor
#=GS A0A164W7Q1/3-108  DR GENE3D; aec30e12de6e26ab827c492cf736a052/3-108; 
#=GS A0A164W7Q1/3-108  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS L8AAV0/3-108      AC L8AAV0
#=GS L8AAV0/3-108      OS Bacillus subtilis BEST7613
#=GS L8AAV0/3-108      DE RNA polymerase sigma factor
#=GS L8AAV0/3-108      DR GENE3D; aec30e12de6e26ab827c492cf736a052/3-108; 
#=GS L8AAV0/3-108      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS G4F0M7/3-108      AC G4F0M7
#=GS G4F0M7/3-108      OS Bacillus subtilis subsp. subtilis str. SC-8
#=GS G4F0M7/3-108      DE RNA polymerase sigma factor
#=GS G4F0M7/3-108      DR GENE3D; aec30e12de6e26ab827c492cf736a052/3-108; 
#=GS G4F0M7/3-108      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A8F9E2/5-110      AC A8F9E2
#=GS A8F9E2/5-110      OS Bacillus pumilus SAFR-032
#=GS A8F9E2/5-110      DE RNA polymerase sigma factor
#=GS A8F9E2/5-110      DR GENE3D; 9955f2320664cd9864a1dcccc4e09650/5-110; 
#=GS A8F9E2/5-110      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS B4AMX4/5-110      AC B4AMX4
#=GS B4AMX4/5-110      OS Bacillus pumilus ATCC 7061
#=GS B4AMX4/5-110      DE RNA polymerase sigma factor
#=GS B4AMX4/5-110      DR GENE3D; 9955f2320664cd9864a1dcccc4e09650/5-110; 
#=GS B4AMX4/5-110      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS A0A0C2PIA5/5-110  AC A0A0C2PIA5
#=GS A0A0C2PIA5/5-110  OS Bacillus pumilus
#=GS A0A0C2PIA5/5-110  DE RNA polymerase sigma factor
#=GS A0A0C2PIA5/5-110  DR GENE3D; 9955f2320664cd9864a1dcccc4e09650/5-110; 
#=GS A0A0C2PIA5/5-110  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS Q65P51/5-110      AC Q65P51
#=GS Q65P51/5-110      OS Bacillus licheniformis DSM 13 = ATCC 14580
#=GS Q65P51/5-110      DE RNA polymerase sigma factor
#=GS Q65P51/5-110      DR GENE3D; a7c4301c2a9aa6250857e5abf48f2022/5-110; 
#=GS Q65P51/5-110      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus licheniformis; 
#=GS W7RTW8/5-110      AC W7RTW8
#=GS W7RTW8/5-110      OS Bacillus licheniformis S 16
#=GS W7RTW8/5-110      DE RNA polymerase sigma factor
#=GS W7RTW8/5-110      DR GENE3D; a7c4301c2a9aa6250857e5abf48f2022/5-110; 
#=GS W7RTW8/5-110      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus licheniformis; 
#=GS R9TPR8/5-110      AC R9TPR8
#=GS R9TPR8/5-110      OS Bacillus paralicheniformis ATCC 9945a
#=GS R9TPR8/5-110      DE RNA polymerase sigma factor
#=GS R9TPR8/5-110      DR GENE3D; a7c4301c2a9aa6250857e5abf48f2022/5-110; 
#=GS R9TPR8/5-110      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus paralicheniformis; 
#=GS T5H8I8/5-110      AC T5H8I8
#=GS T5H8I8/5-110      OS Bacillus licheniformis CG-B52
#=GS T5H8I8/5-110      DE RNA polymerase sigma factor
#=GS T5H8I8/5-110      DR GENE3D; a7c4301c2a9aa6250857e5abf48f2022/5-110; 
#=GS T5H8I8/5-110      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus licheniformis; 
#=GS A0A0W8JVL7/5-110  AC A0A0W8JVL7
#=GS A0A0W8JVL7/5-110  OS Bacillus licheniformis LMG 7559
#=GS A0A0W8JVL7/5-110  DE RNA polymerase sigma factor
#=GS A0A0W8JVL7/5-110  DR GENE3D; a7c4301c2a9aa6250857e5abf48f2022/5-110; 
#=GS A0A0W8JVL7/5-110  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus licheniformis; 
#=GS A0A1L4ESR9/5-110  AC A0A1L4ESR9
#=GS A0A1L4ESR9/5-110  OS Bacillus sp. H15-1
#=GS A0A1L4ESR9/5-110  DE RNA polymerase sigma factor SigW
#=GS A0A1L4ESR9/5-110  DR GENE3D; a7c4301c2a9aa6250857e5abf48f2022/5-110; 
#=GS A0A1L4ESR9/5-110  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. H15-1; 
#=GF TC 234.4 2.1E-74
#=GF SQ 14
Q45585/3-108              MMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYS--
A0A1B2B918/3-108          MMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYS--
A0A164W7Q1/3-108          MMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYS--
L8AAV0/3-108              MMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYS--
G4F0M7/3-108              MMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYS--
A8F9E2/5-110              --IKKRIKQLKKGDQNAFADIVDLYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIESFDVNRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLNMYSQI
B4AMX4/5-110              --IKKRIKQLKKGDQNAFADIVDLYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIESFDVNRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLNMYSQI
A0A0C2PIA5/5-110          --IKKRIKQLKKGDQNAFADIVDLYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIESFDVNRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLNMYSQI
Q65P51/5-110              --IKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQV
W7RTW8/5-110              --IKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQV
R9TPR8/5-110              --IKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQV
T5H8I8/5-110              --IKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQV
A0A0W8JVL7/5-110          --IKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQV
A0A1L4ESR9/5-110          --IKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQV
#=GC scorecons            119999999799996699999997999999999999999699999999999999999979997999999999999999999999999999999999999999699922
#=GC scorecons_70         __*************************************_******************************************************************__
#=GC scorecons_80         __*******_****__*******_***************_**************************************************************_***__
#=GC scorecons_90         __*******_****__*******_***************_******************_***_***************************************_***__
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