# STOCKHOLM 1.0 #=GF ID 1.10.150.90/FF/3053 #=GF DE Gag polyprotein #=GF AC 1.10.150.90/FF/3053 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 49.267 #=GS 1hekA00/1-131 AC P69732 #=GS 1hekA00/1-131 OS Equine infectious anemia virus (ISOLATE WYOMING) #=GS 1hekA00/1-131 DE Gag polyprotein #=GS 1hekA00/1-131 DR CATH; 1hek; A:-6-109; #=GS 1hekA00/1-131 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS 1hekB00/1-131 AC P69732 #=GS 1hekB00/1-131 OS Equine infectious anemia virus (ISOLATE WYOMING) #=GS 1hekB00/1-131 DE Gag polyprotein #=GS 1hekB00/1-131 DR CATH; 1hek; B:-6-109; #=GS 1hekB00/1-131 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS P69730/1-124 AC P69730 #=GS P69730/1-124 OS Equine infectious anemia virus (CLONE 1369) #=GS P69730/1-124 DE Gag polyprotein #=GS P69730/1-124 DR GENE3D; 706d81d1c0a78c673074a0e3dbd64f78/1-124; #=GS P69730/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS P69730/1-124 DR GO; GO:0005515; #=GS C7DZT9/1-124 AC C7DZT9 #=GS C7DZT9/1-124 OS Equine infectious anemia virus #=GS C7DZT9/1-124 DE Gag polyprotein #=GS C7DZT9/1-124 DR GENE3D; 1a6dae66dd4a77f42fd050158f1bbe9c/1-124; #=GS C7DZT9/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS Q9QGS9/1-124 AC Q9QGS9 #=GS Q9QGS9/1-124 OS Equine infectious anemia virus #=GS Q9QGS9/1-124 DE Gag protein #=GS Q9QGS9/1-124 DR GENE3D; 1d5b12446c2e17fbbfb08bbf33924bc8/1-124; #=GS Q9QGS9/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS A8R0H9/1-122 AC A8R0H9 #=GS A8R0H9/1-122 OS Equine infectious anemia virus #=GS A8R0H9/1-122 DE Gag protein #=GS A8R0H9/1-122 DR GENE3D; 2c7db55a0a8d0e3b4c2112a279fcb3f5/1-122; #=GS A8R0H9/1-122 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS J7K4I5/1-125 AC J7K4I5 #=GS J7K4I5/1-125 OS Equine infectious anemia virus #=GS J7K4I5/1-125 DE Gag polyprotein #=GS J7K4I5/1-125 DR GENE3D; 5f7bf44a7a1571e1d793113ac186263e/1-125; #=GS J7K4I5/1-125 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS P69731/1-124 AC P69731 #=GS P69731/1-124 OS Equine infectious anemia virus (clone CL22) #=GS P69731/1-124 DE Gag polyprotein #=GS P69731/1-124 DR GENE3D; 706d81d1c0a78c673074a0e3dbd64f78/1-124; #=GS P69731/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS P69732/1-124 AC P69732 #=GS P69732/1-124 OS Equine infectious anemia virus (ISOLATE WYOMING) #=GS P69732/1-124 DE Gag polyprotein #=GS P69732/1-124 DR GENE3D; 706d81d1c0a78c673074a0e3dbd64f78/1-124; #=GS P69732/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS Q77YS8/1-124 AC Q77YS8 #=GS Q77YS8/1-124 OS Equine infectious anemia virus #=GS Q77YS8/1-124 DE Gag polyprotein #=GS Q77YS8/1-124 DR GENE3D; 706d81d1c0a78c673074a0e3dbd64f78/1-124; #=GS Q77YS8/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS G0Z5I4/1-124 AC G0Z5I4 #=GS G0Z5I4/1-124 OS Equine infectious anemia virus #=GS G0Z5I4/1-124 DE Gag protein #=GS G0Z5I4/1-124 DR GENE3D; 82160185d89fab5cd9b6b1427d19ad2c/1-124; #=GS G0Z5I4/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS A8R0H4/1-124 AC A8R0H4 #=GS A8R0H4/1-124 OS Equine infectious anemia virus #=GS A8R0H4/1-124 DE Gag protein #=GS A8R0H4/1-124 DR GENE3D; c5b06e2b4c658a6845fb8150e8307c05/1-124; #=GS A8R0H4/1-124 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS A8R0H1/1-115 AC A8R0H1 #=GS A8R0H1/1-115 OS Equine infectious anemia virus #=GS A8R0H1/1-115 DE Gag protein #=GS A8R0H1/1-115 DR GENE3D; c9a08040ed2febf68749150f0195ef7f/1-115; #=GS A8R0H1/1-115 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS A8R0G9/1-115 AC A8R0G9 #=GS A8R0G9/1-115 OS Equine infectious anemia virus #=GS A8R0G9/1-115 DE Gag protein #=GS A8R0G9/1-115 DR GENE3D; d5107db11f2c2b72f4f7853c63f30049/1-115; #=GS A8R0G9/1-115 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS W8QUY3/1-119 AC W8QUY3 #=GS W8QUY3/1-119 OS Equine infectious anemia virus #=GS W8QUY3/1-119 DE Gag protein #=GS W8QUY3/1-119 DR GENE3D; df88776d8c16bfd67a276655721a0d54/1-119; #=GS W8QUY3/1-119 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GS W8QRF4/1-119 AC W8QRF4 #=GS W8QRF4/1-119 OS Equine infectious anemia virus #=GS W8QRF4/1-119 DE Gag protein #=GS W8QRF4/1-119 DR GENE3D; e366bab5570249bf232005c4e81a4f2a/1-119; #=GS W8QRF4/1-119 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Equine lentivirus group; Equine infectious anemia virus; #=GF TC 241.5 8.7E-76 #=GF SQ 16 1hekA00/1-131 AXADIGSXGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKXGLQINNVVDGKASFQLLRAKYEKKT-ANKKQSEPSEEY 1hekB00/1-131 AXADIGSXGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKXGLQINNVVDGKASFQLLRAKYEKKT-ANKKQSEPSEEY P69730/1-124 -------MGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKMGLQINNVVDGKASFQLLRAKYEKKT-ANKKQSEPSEEY C7DZT9/1-124 -------MGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLMHDTNFVKEKDWQLRDVIPLLGDVTQTLTGQEREAFERTWWAIAAVKTGLQINTVGDGKATFQLLRAKFEKKT-KRQPEPEPHEEY Q9QGS9/1-124 -------MGDPLTWGKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAAKMGLQINNVADGKASFQLLRAKYERKA-ASKKQSEPSEEY A8R0H9/1-122 -------MGDPVTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNYVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKMGLQINHVGDGKASYQLLKAKYERQA---KKQPEPPEAY J7K4I5/1-125 -------MGDPVTWSKALKKLEKVTVQGSQKLTHGNCNWALSLVDLLHDTNFVKEEDWQLRDVIPLLEDVTQTLTGQEREAFEKTWWAITAVKMGLQINTVGDGKATYQLLKAKYEKKTHNEKRQSEPREEY P69731/1-124 -------MGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKMGLQINNVVDGKASFQLLRAKYEKKT-ANKKQSEPSEEY P69732/1-124 -------MGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKMGLQINNVVDGKASFQLLRAKYEKKT-ANKKQSEPSEEY Q77YS8/1-124 -------MGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKMGLQINNVVDGKASFQLLRAKYEKKT-ANKKQSEPSEEY G0Z5I4/1-124 -------MGDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALTLVDLFHDTNYVKEKDWQLRDVIPLLEDVAQTLSGQEKEAFEKTWWAIAAVKMGLQINNVGDGKASFQLLRAKFERKE-NNKRQTEPREEF A8R0H4/1-124 -------MGDSLTWSKALKKLEKVTVQGSQKLTIGNCNWALSLVDLFHDTNYVKEKDWQLRDVIPLLEDVTQTLSGQEREAFERTWWAISAVKMGLQINNVGDGRASFQLLKAKYEKKT-GKKEQVEGSETY A8R0H1/1-115 ----------------ALKKLEKVTVQGSQKLTIGNCNWALSLVDLFHDTNYVKEKDWQLRDVIPLLEDVAQTLSGQEREAFEKTWWAISAVKMGLQINNAGDGKASFQLLKAKYEKKT-GRKEQVEAAEAY A8R0G9/1-115 ----------------ALKKLEKVTVQGSQKLTIGNCNWALSLVDLYHDTNYTKEKDWQLRDVIPLLEDVTQTLSGQEKEAFERTWWAISAVKMGLQISNVGDGKASFQLLRAKYEKKV-ASKKQPEAPEEY W8QUY3/1-119 -------MGDPLPWSKALKKLEKVTVQGSQKLKPGNCNWALSLVDLFHDTHYVKEKDWQLRDIIPLLEDVSQTLSGQEKEAFERTWWAISAVKMGMQIENVIDGRATFQLLKAKYEKKT-ASKKQSE----- W8QRF4/1-119 -------MGDPVTWSKALKKLEKVTVQGSQKLTSGNCNWALSLVDLLHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQERDAFEKTWWAITAVKMGLQINHVGDGKASFQLVKAKFERKE-NSKKQSE----- #=GC scorecons 000000045554555599999999999999997499999998999969998779989999998999989969997999789997999996989598997684998978998799797850438585943645 #=GC scorecons_70 ________________*****************_***********************************************************_*******_****************____*_*_*_____ #=GC scorecons_80 ________________*****************_************_***********************_******************_***_*****_*_****_****_******____*_*_*_____ #=GC scorecons_90 ________________****************__************_****__*****************_***_***_****_*****_***_****____**_*_****_**_*_*____*_*_*_____ //