# STOCKHOLM 1.0 #=GF ID 1.10.150.20/FF/25164 #=GF DE DNA ligase #=GF AC 1.10.150.20/FF/25164 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 54.787 #=GS Q6N423/537-629 AC Q6N423 #=GS Q6N423/537-629 OS Rhodopseudomonas palustris CGA009 #=GS Q6N423/537-629 DE DNA ligase #=GS Q6N423/537-629 DR GENE3D; 01a397fb649c8b791ad3d69c493f2056/537-629; #=GS Q6N423/537-629 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS Q6N423/537-629 DR EC; 6.5.1.2; #=GS E6VLT8/537-629 AC E6VLT8 #=GS E6VLT8/537-629 OS Rhodopseudomonas palustris DX-1 #=GS E6VLT8/537-629 DE DNA ligase #=GS E6VLT8/537-629 DR GENE3D; 1b8260d21b7c1c066fb96b12007a2971/537-629; #=GS E6VLT8/537-629 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS E6VLT8/537-629 DR EC; 6.5.1.2; #=GS W3RP00/539-631 AC W3RP00 #=GS W3RP00/539-631 OS Afipia sp. P52-10 #=GS W3RP00/539-631 DE DNA ligase #=GS W3RP00/539-631 DR GENE3D; 20856b75953d4d51321d63f230127ab7/539-631; #=GS W3RP00/539-631 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia; Afipia sp. P52-10; #=GS W3RP00/539-631 DR EC; 6.5.1.2; #=GS D6V2S1/529-621 AC D6V2S1 #=GS D6V2S1/529-621 OS Afipia sp. 1NLS2 #=GS D6V2S1/529-621 DE DNA ligase #=GS D6V2S1/529-621 DR GENE3D; 30b4bd506bc4a67c58c1310286b61c4e/529-621; #=GS D6V2S1/529-621 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia; Afipia sp. 1NLS2; #=GS D6V2S1/529-621 DR EC; 6.5.1.2; #=GS A0A0N0KIW5/538-630 AC A0A0N0KIW5 #=GS A0A0N0KIW5/538-630 OS Rhodopseudomonas sp. AAP120 #=GS A0A0N0KIW5/538-630 DE DNA ligase #=GS A0A0N0KIW5/538-630 DR GENE3D; 3660bb084ade9a061070d445560c8ccd/538-630; #=GS A0A0N0KIW5/538-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas sp. AAP120; #=GS A0A0N0KIW5/538-630 DR EC; 6.5.1.2; #=GS Q3STR7/539-631 AC Q3STR7 #=GS Q3STR7/539-631 OS Nitrobacter winogradskyi Nb-255 #=GS Q3STR7/539-631 DE DNA ligase #=GS Q3STR7/539-631 DR GENE3D; 3fd2ed482335154f6619655839e7d3cc/539-631; #=GS Q3STR7/539-631 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter; Nitrobacter winogradskyi; #=GS Q3STR7/539-631 DR EC; 6.5.1.2; #=GS Q133Y4/538-631 AC Q133Y4 #=GS Q133Y4/538-631 OS Rhodopseudomonas palustris BisB5 #=GS Q133Y4/538-631 DE DNA ligase #=GS Q133Y4/538-631 DR GENE3D; 4ed5f42dde0cf54eaa055099b1a6c24c/538-631; #=GS Q133Y4/538-631 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS Q133Y4/538-631 DR EC; 6.5.1.2; #=GS A0A090MIC7/529-621 AC A0A090MIC7 #=GS A0A090MIC7/529-621 OS Afipia felis #=GS A0A090MIC7/529-621 DE DNA ligase #=GS A0A090MIC7/529-621 DR GENE3D; 5be8f1f5275815e2fddd62d1aa1df434/529-621; #=GS A0A090MIC7/529-621 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia; Afipia felis; #=GS A0A090MIC7/529-621 DR EC; 6.5.1.2; #=GS A0A1C2EL56/540-630 AC A0A1C2EL56 #=GS A0A1C2EL56/540-630 OS Bradyrhizobium sp. UASWS1016 #=GS A0A1C2EL56/540-630 DE DNA ligase #=GS A0A1C2EL56/540-630 DR GENE3D; 6f31ce71cd3723d950ef5a7a1086dd4a/540-630; #=GS A0A1C2EL56/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. UASWS1016; #=GS A0A1C2EL56/540-630 DR EC; 6.5.1.2; #=GS A0A0D1NNG8/540-630 AC A0A0D1NNG8 #=GS A0A0D1NNG8/540-630 OS Bradyrhizobium elkanii #=GS A0A0D1NNG8/540-630 DE DNA ligase #=GS A0A0D1NNG8/540-630 DR GENE3D; 6f31ce71cd3723d950ef5a7a1086dd4a/540-630; #=GS A0A0D1NNG8/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium elkanii; #=GS A0A0D1NNG8/540-630 DR EC; 6.5.1.2; #=GS A3WVD5/528-620 AC A3WVD5 #=GS A3WVD5/528-620 OS Nitrobacter sp. Nb-311A #=GS A3WVD5/528-620 DE DNA ligase #=GS A3WVD5/528-620 DR GENE3D; 700b7164d5762e97cbf2d22fe2b2071e/528-620; #=GS A3WVD5/528-620 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter; Nitrobacter sp. Nb-311A; #=GS A3WVD5/528-620 DR EC; 6.5.1.2; #=GS Q07PR9/537-629 AC Q07PR9 #=GS Q07PR9/537-629 OS Rhodopseudomonas palustris BisA53 #=GS Q07PR9/537-629 DE DNA ligase #=GS Q07PR9/537-629 DR GENE3D; 8fde8c455381cac28b6478f045b9d90e/537-629; #=GS Q07PR9/537-629 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS Q07PR9/537-629 DR EC; 6.5.1.2; #=GS A0A1G8TCY9/540-630 AC A0A1G8TCY9 #=GS A0A1G8TCY9/540-630 OS Bradyrhizobium ottawaense #=GS A0A1G8TCY9/540-630 DE DNA ligase #=GS A0A1G8TCY9/540-630 DR GENE3D; a3e4e379f2c2061d9373d3bc3067f473/540-630; #=GS A0A1G8TCY9/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium ottawaense; #=GS A0A1G8TCY9/540-630 DR EC; 6.5.1.2; #=GS A0A1M6V9U8/540-630 AC A0A1M6V9U8 #=GS A0A1M6V9U8/540-630 OS Bradyrhizobium lablabi #=GS A0A1M6V9U8/540-630 DE DNA ligase (NAD+) #=GS A0A1M6V9U8/540-630 DR GENE3D; a3e4e379f2c2061d9373d3bc3067f473/540-630; #=GS A0A1M6V9U8/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium lablabi; #=GS A0A1M6V9U8/540-630 DR EC; 6.5.1.2; #=GS U1HFY6/540-630 AC U1HFY6 #=GS U1HFY6/540-630 OS Bradyrhizobium sp. DFCI-1 #=GS U1HFY6/540-630 DE DNA ligase #=GS U1HFY6/540-630 DR GENE3D; a55dc03959f7e56f3497494271dc40af/540-630; #=GS U1HFY6/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. DFCI-1; #=GS U1HFY6/540-630 DR EC; 6.5.1.2; #=GS A0A161SPN3/539-630 AC A0A161SPN3 #=GS A0A161SPN3/539-630 OS #=GS A0A161SPN3/539-630 DE DNA ligase #=GS A0A161SPN3/539-630 DR GENE3D; b43e83586b3f82d8d28f410c0264fbed/539-630; #=GS A0A161SPN3/539-630 DR ORG; #=GS A0A161SPN3/539-630 DR EC; 6.5.1.2; #=GS A0A0D7F3B7/540-632 AC A0A0D7F3B7 #=GS A0A0D7F3B7/540-632 OS Rhodopseudomonas palustris #=GS A0A0D7F3B7/540-632 DE DNA ligase #=GS A0A0D7F3B7/540-632 DR GENE3D; bd63bd19a2d54b5ca781224e2cfc3fd8/540-632; #=GS A0A0D7F3B7/540-632 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS A0A0D7F3B7/540-632 DR EC; 6.5.1.2; #=GS Q2IYJ4/536-629 AC Q2IYJ4 #=GS Q2IYJ4/536-629 OS Rhodopseudomonas palustris HaA2 #=GS Q2IYJ4/536-629 DE DNA ligase #=GS Q2IYJ4/536-629 DR GENE3D; c2e5ecf844a904f405eef6aa4fbd64c9/536-629; #=GS Q2IYJ4/536-629 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS Q2IYJ4/536-629 DR EC; 6.5.1.2; #=GS A0A0D7PRK4/540-631 AC A0A0D7PRK4 #=GS A0A0D7PRK4/540-631 OS Bradyrhizobium sp. LTSP885 #=GS A0A0D7PRK4/540-631 DE DNA ligase #=GS A0A0D7PRK4/540-631 DR GENE3D; c516f4400cfe1582e06430db467bfc5c/540-631; #=GS A0A0D7PRK4/540-631 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. LTSP885; #=GS A0A0D7PRK4/540-631 DR EC; 6.5.1.2; #=GS B3QFL8/537-629 AC B3QFL8 #=GS B3QFL8/537-629 OS Rhodopseudomonas palustris TIE-1 #=GS B3QFL8/537-629 DE DNA ligase #=GS B3QFL8/537-629 DR GENE3D; c618fb2df5adcf028fc7dafb0ad5eab3/537-629; #=GS B3QFL8/537-629 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris; #=GS B3QFL8/537-629 DR EC; 6.5.1.2; #=GS I2QPC0/598-689 AC I2QPC0 #=GS I2QPC0/598-689 OS Bradyrhizobium sp. WSM1253 #=GS I2QPC0/598-689 DE DNA ligase #=GS I2QPC0/598-689 DR GENE3D; cc0156f070a7298a0eaa9e865805abe0/598-689; #=GS I2QPC0/598-689 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. WSM1253; #=GS I2QPC0/598-689 DR EC; 6.5.1.2; #=GS A0A0R3L6A7/541-631 AC A0A0R3L6A7 #=GS A0A0R3L6A7/541-631 OS Bradyrhizobium jicamae #=GS A0A0R3L6A7/541-631 DE DNA ligase #=GS A0A0R3L6A7/541-631 DR GENE3D; cf9a86c938487ff85ec34089dbf5f70b/541-631; #=GS A0A0R3L6A7/541-631 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium jicamae; #=GS A0A0R3L6A7/541-631 DR EC; 6.5.1.2; #=GS A0A0D7QF47/540-630 AC A0A0D7QF47 #=GS A0A0D7QF47/540-630 OS Bradyrhizobium sp. LTSPM299 #=GS A0A0D7QF47/540-630 DE DNA ligase #=GS A0A0D7QF47/540-630 DR GENE3D; d3610b01c1c9bda8b259f6a077c460bb/540-630; #=GS A0A0D7QF47/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. LTSPM299; #=GS A0A0D7QF47/540-630 DR EC; 6.5.1.2; #=GS A0A1H0CS06/540-630 AC A0A1H0CS06 #=GS A0A1H0CS06/540-630 OS Afipia sp. GAS231 #=GS A0A1H0CS06/540-630 DE DNA ligase #=GS A0A1H0CS06/540-630 DR GENE3D; d63aa2f9ac530f5742a0d7cc2f2ebfe3/540-630; #=GS A0A1H0CS06/540-630 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia; Afipia sp. GAS231; #=GS A0A1H0CS06/540-630 DR EC; 6.5.1.2; #=GS K8NV86/529-622 AC K8NV86 #=GS K8NV86/529-622 OS Afipia felis ATCC 53690 #=GS K8NV86/529-622 DE DNA ligase #=GS K8NV86/529-622 DR GENE3D; dbe3415d0fc3bd5daf55a48198292813/529-622; #=GS K8NV86/529-622 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia; Afipia felis; #=GS K8NV86/529-622 DR EC; 6.5.1.2; #=GS B6JB45/529-620 AC B6JB45 #=GS B6JB45/529-620 OS Oligotropha carboxidovorans OM5 #=GS B6JB45/529-620 DE DNA ligase #=GS B6JB45/529-620 DR GENE3D; ec3de0bfe0c0786652f02479d13541da/529-620; #=GS B6JB45/529-620 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha; Oligotropha carboxidovorans; #=GS B6JB45/529-620 DR EC; 6.5.1.2; #=GS Q1QNT2/536-629 AC Q1QNT2 #=GS Q1QNT2/536-629 OS Nitrobacter hamburgensis X14 #=GS Q1QNT2/536-629 DE DNA ligase #=GS Q1QNT2/536-629 DR GENE3D; fcb2bff085e51b51b229e9ad129d97e8/536-629; #=GS Q1QNT2/536-629 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter; Nitrobacter hamburgensis; #=GS Q1QNT2/536-629 DR EC; 6.5.1.2; #=GF TC 171.3 2.9E-54 #=GF SQ 27 Q6N423/537-629 -IELHRLVFALGIRHVGEGNAKLLARHYGTLDAFLSAMRAAADAQTEEGNTSEAYQDLDNIAGIGDVVAEAVVEFFAEERNIKALDALLAELTE- E6VLT8/537-629 -IELHRLVFALGIRHVGEGNAKLLARHYGTLDAFLTAMRAAADAQTEEGNTSEAYQDLDNIAGIGDVVAEAVVEFFAEERNVKALDALLAELTE- W3RP00/539-631 -IELHRLIFALGIRHVGEGNAKLLARHYGTLAAFVEAMRAAAEGQSEEGNTSEAYDDLNGIEGIGEVVADAVVEFFAEPRNIKALDDLLAEIEV- D6V2S1/529-621 -IELNRLIFALGIRHVGEGNAKLLARHYGSIENLRAAMAEAAAAQTEEGNTSEAYADLNNIGGIGDIVADAVVEFFAEKRNVKALDELLAEIEV- A0A0N0KIW5/538-630 -IELHRLIFALGIRHVGEGNAKLLARHYGTLDAFLEAMRAAADAQTEEGNTSEAYQDLDNIAGIGDVVAEAVVEFFAETRNRAALDALLAELAE- Q3STR7/539-631 -IELNRLIFALGIRHVGEGNAKLLARHYGSIESFRSAMTEAAAAQTEAGNDSEAYADLTNIGGIGDIVADAVVEFFAEPRNVKALNDLLEEIEV- Q133Y4/538-631 -IELNRLIFALGIRHVGEGNAKLLARHYGSIDVFLAAMRAAAEGQTPEGNTSEAYQDLDNIAGIGDVVAEAVVEFFAEPRNVGALDALLREIEVL A0A090MIC7/529-621 -IELNRLIFALGIRHVGEGNAKLLARHYGSMENLRAAMAEAAAAQTEEGNTSEAYADLNNIGGIGDIVADAVVEFFAEKRNVKALDELLAEIEV- A0A1C2EL56/540-630 -IELHRLIFALGIRHVGEGNAKLLARHYHTIENFRDAMLAAAKGSGDEENGTEAYQHLNDIDGIGEIVADAVVEFFAEPRNVKALGELLRQI--- A0A0D1NNG8/540-630 -IELHRLIFALGIRHVGEGNAKLLARHYHTIENFRDAMLAAAKGSGDEENGTEAYQHLNDIDGIGEIVADAVVEFFAEPRNVKALGELLRQI--- A3WVD5/528-620 -IELNRLIFALGIRHVGEGNAKLLARHYGGIENFRSAMAEAAGAQTDEGNASEAYADLNNIGGIGEIVANAVVEFFAEPRNVKALNDLLEEIEV- Q07PR9/537-629 -IELHRLIFALGIRHVGEGNAKLLARHYGTIDAFLGAMRAAAAGQTEEGNTSEAYQDLDNIGGIGDIVAEAVVEFFAEERNVEALDALLGELDE- A0A1G8TCY9/540-630 -IELHRLIFALGIRHVGEGNAKLLARHYGTIENFRDAMLAAAKGAEAEENETEAYQDLNNIGGIGEIVADAVVEFFAEPRNVKALGELLREI--- A0A1M6V9U8/540-630 -IELHRLIFALGIRHVGEGNAKLLARHYGTIENFRDAMLAAAKGAEAEENETEAYQDLNNIGGIGEIVADAVVEFFAEPRNVKALGELLREI--- U1HFY6/540-630 -IELHRLIFALGIRHVGEGNAKLLARHYHTIENFREAMLAAAKGSQDEENTTEAYQDLNDIDGIGEIVADAVVEFFAEPRNVKALGELLRQI--- A0A161SPN3/539-630 -IELNRLIFALGIRHIGEGNAKLLARHYGSFTAFREAMLAAAAGQGSEENTSEAYADLNAIDGVGEIVADAVVEFFAEKRNVKALDELLSEIE-- A0A0D7F3B7/540-632 -IELHRLIFALGIRHVGEGNAKLLARHYGTFDAFRDAMLAAASGQSEEGNSSEAYTDLNNIGGVGEIVADAVVEFFAEQRNVKALGELLDEIEV- Q2IYJ4/536-629 TIELHRLIFALGIRHVGEGNAKLLARHYGTLDAFLAAMRAAAEGQTEEGNTSEAYQDLDNIAGIGEVVAAAVVEFFAEPRNVAALDALLAELKD- A0A0D7PRK4/540-631 -IELHRLIFALGIRHVGEGNAKLLARHYHTIENFREAMLAAAKGSTDEENTTEAYQDLNNIGGIGEIVADAVVEFFAEPRNVKALGELLREIE-- B3QFL8/537-629 -IELHRLIFALGIRHVGEGNAKLLARHYGTLDAFLSAMRAAADAQTEEGNTSEAYQDLDNIAGIGDVVAEAVVEFFAEERNIKALDALLAELTE- I2QPC0/598-689 -IELHRLIFALGIRHVGEGNAKLLARHYATIENFRGAMLAAATGLGKEENNTEAYQDLNNIGGIGKIVADAVVEFFAEPRNVKALGELLGEIE-- A0A0R3L6A7/541-631 -IELHRLIFALGIRHVGEGNAKLLARHYGTIGNFRESMLAAAKGSGDEENTTEAYQDLNNIGGIGEIVADAVVEFFAEPRNMKALGELLSEI--- A0A0D7QF47/540-630 -IDLHRLIFALGIRHVGEGNAKLLARHYGSIDNFRDAMLAAAEGSKDEENTTEAYQDLNNIGGIGEIVADAVVEFFAEPRNVKALGELLREI--- A0A1H0CS06/540-630 -IELHRLIFALGIRHVGEGNAKLLARHYGTIENFREAMLAAAKGAEAEENETEAYQDLNNIGGIGEIVADAVVEFFAEPRNVKALGELLREI--- K8NV86/529-622 -IELNRLIFALGIRHVGEGNAKLLARHYGTIENFRAAMAEAAAVQTEEGNASEAYIDLNNIGGIGDIVADAVVEFFAEKRNVKALGELLDEIDVL B6JB45/529-620 -IELNRLIFALGIRHVGEGNAKLLARHYGTIENFRAAMAEAAAAQTEEGNPSEAYADLNAIGGVGDIVADAVVEFFAEERNVKALNELLHEIE-- Q1QNT2/536-629 TIELNRLIFALGIRHVGEGNAKLLARHYGGIDAFRAAMSEAAAAQTDDGNASEAYADLNNISGIGDIVADAVVEFFAETRNVKALNDLLEEIEV- #=GC scorecons 09896998999999989999999999996666585489469946555869569995896695989679969999999949977995599487210 #=GC scorecons_70 _******************************__*__**_***_____***_****_*****_****************_******__**_**___ #=GC scorecons_80 _***_***********************_____*__**__**_____*_*__***_**__*_***_***_********_***_**__**_**___ #=GC scorecons_90 _***_***********************_____*__**__**_____*_*__***_**__*_***__**_********_**__**__**______ //