# STOCKHOLM 1.0
#=GF ID 1.10.1200.30/FF/58
#=GF DE P24 capsid protein
#=GF AC 1.10.1200.30/FF/58
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 28.018
#=GS 5dckA00/1-72        AC P16087
#=GS 5dckA00/1-72        OS Feline immunodeficiency virus (isolate Petaluma)
#=GS 5dckA00/1-72        DE Gag polyprotein
#=GS 5dckA00/1-72        DR CATH; 5dck; A:141-211; 
#=GS 5dckA00/1-72        DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS 5dckB00/1-72        AC P16087
#=GS 5dckB00/1-72        OS Feline immunodeficiency virus (isolate Petaluma)
#=GS 5dckB00/1-72        DE Gag polyprotein
#=GS 5dckB00/1-72        DR CATH; 5dck; B:141-212; 
#=GS 5dckB00/1-72        DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS Q66968/194-263      AC Q66968
#=GS Q66968/194-263      OS Feline immunodeficiency virus
#=GS Q66968/194-263      DE Gag protein
#=GS Q66968/194-263      DR GENE3D; 2a8cf54417708096099ac260c950fedd/194-263; 
#=GS Q66968/194-263      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS A0A0B4WUX7/167-247  AC A0A0B4WUX7
#=GS A0A0B4WUX7/167-247  OS Feline immunodeficiency virus
#=GS A0A0B4WUX7/167-247  DE Gag protein
#=GS A0A0B4WUX7/167-247  DR GENE3D; a290a7b450dfeb6f6901f5d2a6753218/167-247; 
#=GS A0A0B4WUX7/167-247  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS P16087/278-342      AC P16087
#=GS P16087/278-342      OS Feline immunodeficiency virus (isolate Petaluma)
#=GS P16087/278-342      DE Gag polyprotein
#=GS P16087/278-342      DR GENE3D; a9e797a54392a4f694ca0878daf13dbf/278-342; 
#=GS P16087/278-342      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS Q68LA9/279-342      AC Q68LA9
#=GS Q68LA9/279-342      OS Feline immunodeficiency virus
#=GS Q68LA9/279-342      DE Gag polyprotein
#=GS Q68LA9/279-342      DR GENE3D; ab3358e1d3112164b6465bdddd274917/279-342; 
#=GS Q68LA9/279-342      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS D0E7R7/278-342      AC D0E7R7
#=GS D0E7R7/278-342      OS Feline immunodeficiency virus
#=GS D0E7R7/278-342      DE Gag polyprotein
#=GS D0E7R7/278-342      DR GENE3D; b61ed9afdd2c94b3ff7d5c4c15fa2461/278-342; 
#=GS D0E7R7/278-342      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GS P31821/278-342      AC P31821
#=GS P31821/278-342      OS Feline immunodeficiency virus (isolate TM2)
#=GS P31821/278-342      DE Gag polyprotein
#=GS P31821/278-342      DR GENE3D; e72da3a6f8e0836381eccf93fdd85446/278-342; 
#=GS P31821/278-342      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GF TC 159.1 6.5E-51
#=GF SQ 8
5dckA00/1-72                HMVQLRQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANADCKKAMSHLKPESTLEEKLRACQE-----------
5dckB00/1-72                HMVQLRQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANADCKKAMSHLKPESTLEEKLRACQE-----------
Q66968/194-263              --VQLKQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANPDCKRAMSHLKPESTLEEKLRACQE-----------
A0A0B4WUX7/167-247          --VQLRQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANAECKKAMSHLKPESTLEEKLRACQEIGSPGYKMQLL
P16087/278-342              --VQLRQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANADCKKAMSHLKPESTLEEKL----------------
Q68LA9/279-342              ---QMKQGVKEDYASFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANPDCKRAMSHLKPESTLEEKL----------------
D0E7R7/278-342              --VQLKQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANPDCKRAMSHLKPESPLEEKL----------------
P31821/278-342              --VQLKQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANPDCKRAMSHLKPESTLEEKL----------------
#=GC scorecons              00697699799997999999999999999999999999999999999579969999999997999992222200000000000
#=GC scorecons_70           __*********************************************_*******************________________
#=GC scorecons_80           ___**_*****************************************_***_***************________________
#=GC scorecons_90           ___*__**_****_*********************************__**_*********_*****________________
//