# STOCKHOLM 1.0
#=GF ID 1.10.1140.10/FF/1000
#=GF DE V-type ATP synthase alpha chain
#=GF AC 1.10.1140.10/FF/1000
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 24.497
#=GS 3gqbA04/430-578     AC Q56403
#=GS 3gqbA04/430-578     OS Thermus thermophilus HB8
#=GS 3gqbA04/430-578     DE V-type ATP synthase alpha chain
#=GS 3gqbA04/430-578     DR CATH; 3gqb; A:430-578; 
#=GS 3gqbA04/430-578     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3gqbA04/430-578     DR GO; GO:0005515; 
#=GS 3gqbA04/430-578     DR EC; 3.6.3.14; 
#=GS 3w3aA04/430-577     AC Q56403
#=GS 3w3aA04/430-577     OS Thermus thermophilus HB8
#=GS 3w3aA04/430-577     DE V-type ATP synthase alpha chain
#=GS 3w3aA04/430-577     DR CATH; 3w3a; A:430-577; 
#=GS 3w3aA04/430-577     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3w3aA04/430-577     DR GO; GO:0005515; 
#=GS 3w3aA04/430-577     DR EC; 3.6.3.14; 
#=GS 3gqbC04/430-578     AC Q56403
#=GS 3gqbC04/430-578     OS Thermus thermophilus HB8
#=GS 3gqbC04/430-578     DE V-type ATP synthase alpha chain
#=GS 3gqbC04/430-578     DR CATH; 3gqb; C:430-578; 
#=GS 3gqbC04/430-578     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3gqbC04/430-578     DR GO; GO:0005515; 
#=GS 3gqbC04/430-578     DR EC; 3.6.3.14; 
#=GS 3w3aB04/430-577     AC Q56403
#=GS 3w3aB04/430-577     OS Thermus thermophilus HB8
#=GS 3w3aB04/430-577     DE V-type ATP synthase alpha chain
#=GS 3w3aB04/430-577     DR CATH; 3w3a; B:430-577; 
#=GS 3w3aB04/430-577     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3w3aB04/430-577     DR GO; GO:0005515; 
#=GS 3w3aB04/430-577     DR EC; 3.6.3.14; 
#=GS 3w3aC04/430-577     AC Q56403
#=GS 3w3aC04/430-577     OS Thermus thermophilus HB8
#=GS 3w3aC04/430-577     DE V-type ATP synthase alpha chain
#=GS 3w3aC04/430-577     DR CATH; 3w3a; C:430-577; 
#=GS 3w3aC04/430-577     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3w3aC04/430-577     DR GO; GO:0005515; 
#=GS 3w3aC04/430-577     DR EC; 3.6.3.14; 
#=GS 3w3aI04/430-577     AC Q56403
#=GS 3w3aI04/430-577     OS Thermus thermophilus HB8
#=GS 3w3aI04/430-577     DE V-type ATP synthase alpha chain
#=GS 3w3aI04/430-577     DR CATH; 3w3a; I:430-577; 
#=GS 3w3aI04/430-577     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3w3aI04/430-577     DR GO; GO:0005515; 
#=GS 3w3aI04/430-577     DR EC; 3.6.3.14; 
#=GS 3w3aJ04/430-577     AC Q56403
#=GS 3w3aJ04/430-577     OS Thermus thermophilus HB8
#=GS 3w3aJ04/430-577     DE V-type ATP synthase alpha chain
#=GS 3w3aJ04/430-577     DR CATH; 3w3a; J:430-577; 
#=GS 3w3aJ04/430-577     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3w3aJ04/430-577     DR GO; GO:0005515; 
#=GS 3w3aJ04/430-577     DR EC; 3.6.3.14; 
#=GS 3w3aK04/430-577     AC Q56403
#=GS 3w3aK04/430-577     OS Thermus thermophilus HB8
#=GS 3w3aK04/430-577     DE V-type ATP synthase alpha chain
#=GS 3w3aK04/430-577     DR CATH; 3w3a; K:430-577; 
#=GS 3w3aK04/430-577     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 3w3aK04/430-577     DR GO; GO:0005515; 
#=GS 3w3aK04/430-577     DR EC; 3.6.3.14; 
#=GS Q56403/430-578      AC Q56403
#=GS Q56403/430-578      OS Thermus thermophilus HB8
#=GS Q56403/430-578      DE V-type ATP synthase alpha chain
#=GS Q56403/430-578      DR GENE3D; 9486c17a3bc18b183089f2bd9ee07995/430-578; 
#=GS Q56403/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS Q56403/430-578      DR GO; GO:0005515; 
#=GS Q56403/430-578      DR EC; 3.6.3.14; 
#=GS G8N8D9/430-578      AC G8N8D9
#=GS G8N8D9/430-578      OS Thermus sp. CCB_US3_UF1
#=GS G8N8D9/430-578      DE V-type ATP synthase alpha chain
#=GS G8N8D9/430-578      DR GENE3D; 0837af5e443248753f30366921011ac5/430-578; 
#=GS G8N8D9/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus sp. CCB_US3_UF1; 
#=GS G8N8D9/430-578      DR EC; 3.6.3.14; 
#=GS W2U721/430-578      AC W2U721
#=GS W2U721/430-578      OS Thermus sp. NMX2.A1
#=GS W2U721/430-578      DE V-type ATP synthase alpha chain
#=GS W2U721/430-578      DR GENE3D; 195277eb705b8b383ad486de4f82169a/430-578; 
#=GS W2U721/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus sp. NMX2.A1; 
#=GS W2U721/430-578      DR EC; 3.6.3.14; 
#=GS A0A0N0IQ54/430-578  AC A0A0N0IQ54
#=GS A0A0N0IQ54/430-578  OS Thermus scotoductus
#=GS A0A0N0IQ54/430-578  DE V-type ATP synthase alpha chain
#=GS A0A0N0IQ54/430-578  DR GENE3D; 195277eb705b8b383ad486de4f82169a/430-578; 
#=GS A0A0N0IQ54/430-578  DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus scotoductus; 
#=GS A0A0N0IQ54/430-578  DR EC; 3.6.3.14; 
#=GS K7QUG7/430-578      AC K7QUG7
#=GS K7QUG7/430-578      OS Thermus oshimai JL-2
#=GS K7QUG7/430-578      DE V-type ATP synthase alpha chain
#=GS K7QUG7/430-578      DR GENE3D; 1c199afcfb483ee4fe83316eb0e8c539/430-578; 
#=GS K7QUG7/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus oshimai; 
#=GS K7QUG7/430-578      DR EC; 3.6.3.14; 
#=GS F6DHR7/430-578      AC F6DHR7
#=GS F6DHR7/430-578      OS Thermus thermophilus SG0.5JP17-16
#=GS F6DHR7/430-578      DE V-type ATP synthase alpha chain
#=GS F6DHR7/430-578      DR GENE3D; 4693edbeb51d99579c70bedb8b85b047/430-578; 
#=GS F6DHR7/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS F6DHR7/430-578      DR EC; 3.6.3.14; 
#=GS A0A0B0SDM1/430-578  AC A0A0B0SDM1
#=GS A0A0B0SDM1/430-578  OS Thermus sp. 2.9
#=GS A0A0B0SDM1/430-578  DE V-type ATP synthase alpha chain
#=GS A0A0B0SDM1/430-578  DR GENE3D; 5fa12a556e792a7e4b889889df700aa7/430-578; 
#=GS A0A0B0SDM1/430-578  DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus sp. 2.9; 
#=GS A0A0B0SDM1/430-578  DR EC; 3.6.3.14; 
#=GS Q72J72/430-578      AC Q72J72
#=GS Q72J72/430-578      OS Thermus thermophilus HB27
#=GS Q72J72/430-578      DE V-type ATP synthase alpha chain
#=GS Q72J72/430-578      DR GENE3D; 75dd11f7c784f4b9b759041dafef99b4/430-578; 
#=GS Q72J72/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS Q72J72/430-578      DR EC; 3.6.3.14; 
#=GS H7GGU7/430-578      AC H7GGU7
#=GS H7GGU7/430-578      OS Thermus parvatiensis
#=GS H7GGU7/430-578      DE V-type ATP synthase alpha chain
#=GS H7GGU7/430-578      DR GENE3D; 8b27c5e89bad0e30f4166386fe007d21/430-578; 
#=GS H7GGU7/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus parvatiensis; 
#=GS H7GGU7/430-578      DR EC; 3.6.3.14; 
#=GS E8PNV7/430-578      AC E8PNV7
#=GS E8PNV7/430-578      OS Thermus scotoductus SA-01
#=GS E8PNV7/430-578      DE V-type ATP synthase alpha chain
#=GS E8PNV7/430-578      DR GENE3D; 8e843505f627f191bcd6ea59bc43eb60/430-578; 
#=GS E8PNV7/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus scotoductus; 
#=GS E8PNV7/430-578      DR EC; 3.6.3.14; 
#=GS A0A0A2WWC5/430-578  AC A0A0A2WWC5
#=GS A0A0A2WWC5/430-578  OS Thermus filiformis
#=GS A0A0A2WWC5/430-578  DE V-type ATP synthase alpha chain
#=GS A0A0A2WWC5/430-578  DR GENE3D; be84cc8b64f584bb13c1ce1b1820a5dc/430-578; 
#=GS A0A0A2WWC5/430-578  DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus filiformis; 
#=GS A0A0A2WWC5/430-578  DR EC; 3.6.3.14; 
#=GS A0A0X8D7K6/430-578  AC A0A0X8D7K6
#=GS A0A0X8D7K6/430-578  OS Thermus parvatiensis
#=GS A0A0X8D7K6/430-578  DE V-type ATP synthase alpha chain
#=GS A0A0X8D7K6/430-578  DR GENE3D; d208bb379d8e154b5fb33ea4744290ba/430-578; 
#=GS A0A0X8D7K6/430-578  DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus parvatiensis; 
#=GS A0A0X8D7K6/430-578  DR EC; 3.6.3.14; 
#=GS H9ZQR9/430-578      AC H9ZQR9
#=GS H9ZQR9/430-578      OS Thermus thermophilus JL-18
#=GS H9ZQR9/430-578      DE V-type ATP synthase alpha chain
#=GS H9ZQR9/430-578      DR GENE3D; d529291f80b423a663bcd79e2955f92e/430-578; 
#=GS H9ZQR9/430-578      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS H9ZQR9/430-578      DR EC; 3.6.3.14; 
#=GS A0A1J0LQH6/430-578  AC A0A1J0LQH6
#=GS A0A1J0LQH6/430-578  OS Thermus brockianus
#=GS A0A1J0LQH6/430-578  DE V-type ATP synthase alpha chain
#=GS A0A1J0LQH6/430-578  DR GENE3D; e45a4a7f4d2b44126ce54fb984c7dcbe/430-578; 
#=GS A0A1J0LQH6/430-578  DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus brockianus; 
#=GS A0A1J0LQH6/430-578  DR EC; 3.6.3.14; 
#=GS A0A0M9AFN3/430-578  AC A0A0M9AFN3
#=GS A0A0M9AFN3/430-578  OS Thermus aquaticus
#=GS A0A0M9AFN3/430-578  DE V-type ATP synthase alpha chain
#=GS A0A0M9AFN3/430-578  DR GENE3D; fd14495ccf480f9bc32f1aef71f3fa90/430-578; 
#=GS A0A0M9AFN3/430-578  DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus aquaticus; 
#=GS A0A0M9AFN3/430-578  DR EC; 3.6.3.14; 
#=GS A0A1J1EKZ1/53-201   AC A0A1J1EKZ1
#=GS A0A1J1EKZ1/53-201   OS Thermus thermophilus
#=GS A0A1J1EKZ1/53-201   DE V-type ATP synthase subunit alpha
#=GS A0A1J1EKZ1/53-201   DR GENE3D; 6eaa5575d6db2ccea4fd0a7ba97bbb9d/53-201; 
#=GS A0A1J1EKZ1/53-201   DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GF TC 0.0 0.0E+00
#=GF SQ 24
3gqbA04/430-578             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYSSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKALA
3w3aA04/430-577             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL-
3gqbC04/430-578             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYSSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKALA
3w3aB04/430-577             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL-
3w3aC04/430-577             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL-
3w3aI04/430-577             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL-
3w3aJ04/430-577             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL-
3w3aK04/430-577             LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL-
Q56403/430-578              LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKALA
G8N8D9/430-578              LFTGALDPWYREHVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMAKAYGIMKMILTLYKEAEAAIRRGVSIDEILALPVIERIGRARYVGEEDFPRYLEEAMREMDGAFKALA
W2U721/430-578              LFTPALDPWYREHVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEIDAYCSMQKAYGIMKMILSLYKEAEAAIRRGVTVDEILQLPVIERIGRARYVSEQDFPRYFEEAMREIEGAFKALA
A0A0N0IQ54/430-578          LFTPALDPWYREHVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEIDAYCSMQKAYGIMKMILSLYKEAEAAIRRGVTVDEILQLPVIERIGRARYVSEQDFPRYFEEAMREIEGAFKALA
K7QUG7/430-578              LFTPALDPWYREHVAPDYPELRDTISELLQREAGLQEIVQLVGPDALQDAERLIIEVGRIIREDFLQQNAYHEVDAYCSMPKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVVERIGRARYVTEEAFPAYLEEALKEIEGAFKALA
F6DHR7/430-578              LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSMDEILQLPVVERIGRARYVSEEEFPAYFEEAMKEIQGAFKALA
A0A0B0SDM1/430-578          LFTGALDPWYRENVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMRKAYGIMKMILTFYKEAEAAIRRGVSMDEILGLPVIERIGRARYVSEEEFPRYFEEAMKEIEGAFKALA
Q72J72/430-578              LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEVDAYCSMRKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVVERIGRARYVSEEEFPAYFEEAMKEIQGAFKALA
H7GGU7/430-578              LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILTFYKEAEAAIRRGVSIDEILALPVIERIGRARYVSEEAFPGYFEEAMEEIEGAFKALA
E8PNV7/430-578              LFTPALDPWYREHVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEIDAYCSMQKAYGIMKMILSLYKEAEAAIRRGVSVDEILGLPVIERIGRARYVSEQDFPRYFEEAMREIEGAFKALA
A0A0A2WWC5/430-578          LFTGALDPWYRENVAEDYPELRDTISELLQKEAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIRRGVSIDEILQLPVVERIGRARYVGEEEFGAYFEEAMKEIEGAFRALA
A0A0X8D7K6/430-578          LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILTFYKEAEAAIRRGVSIDEILALPVIERIGRARYVSEEAFPGYFEEAMEEIEGAFKALA
H9ZQR9/430-578              LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKALA
A0A1J0LQH6/430-578          LFTGALDPWYRENVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMRKAYGIMKMILSLYKEAEAAIRRGVSIDEILALPVIERIGRARYVSEEEFPRYFEEAMREIEGAFKALA
A0A0M9AFN3/430-578          LFTGALDPWYRQNVAPDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEIDAYCSMRKAYGIMKMILTLYKEAEAAIRRGVSIDEILALPVIERIGRARYVSEEEFPRYFEEAMREIEGAFRALA
A0A1J1EKZ1/53-201           LFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILTFYKEAEAAIKRGVSIDEILQLPVVERIGRARYVSEEEFPRYFEQAMEEIQGAFKALA
#=GC scorecons              99959999999869959999999899999989999999999999999999999899999999999999997997999899599999999995699999999799977999959996999999999797698597989869869998995
#=GC scorecons_70           ***_***********_****************************************************************_**********_*******************_***_************_**_*********_******_
#=GC scorecons_80           ***_********_**_****************************************************************_**********__********_*********_***_************_**_******_**_******_
#=GC scorecons_90           ***_********_**_*******_**********************************************_**_******_**********__********_***__****_***_*********_*__**_*_****_**_******_
//