# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/89315
#=GF DE Nif-specific regulatory protein
#=GF AC 1.10.10.60/FF/89315
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 45.580
#=GS Q6D306/479-523      AC Q6D306
#=GS Q6D306/479-523      OS Pectobacterium atrosepticum SCRI1043
#=GS Q6D306/479-523      DE Nif-specific regulatory protein
#=GS Q6D306/479-523      DR GENE3D; 0f18ae6f7ca5ba6e2243e3f0f2ad2538/479-523; 
#=GS Q6D306/479-523      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium; Pectobacterium atrosepticum; 
#=GS E0SHZ4/467-522      AC E0SHZ4
#=GS E0SHZ4/467-522      OS Dickeya dadantii 3937
#=GS E0SHZ4/467-522      DE Mo/Fe-nitrogenase-specific transcriptional regulator NifA
#=GS E0SHZ4/467-522      DR GENE3D; 1654e246cb979aaf1bc4fd83d4847555/467-522; 
#=GS E0SHZ4/467-522      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya; Dickeya dadantii; 
#=GS C6C8V2/465-523      AC C6C8V2
#=GS C6C8V2/465-523      OS Dickeya paradisiaca Ech703
#=GS C6C8V2/465-523      DE Transcriptional regulator, NifA, Fis Family
#=GS C6C8V2/465-523      DR GENE3D; 313cc4b1df037ffe525138e0c4e0a246/465-523; 
#=GS C6C8V2/465-523      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya; Dickeya paradisiaca; 
#=GS V3TL36/470-522      AC V3TL36
#=GS V3TL36/470-522      OS Serratia sp. ATCC 39006
#=GS V3TL36/470-522      DE Uncharacterized protein
#=GS V3TL36/470-522      DR GENE3D; 4df8a017286b823c2421bb67223d4483/470-522; 
#=GS V3TL36/470-522      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia; Serratia sp. ATCC 39006; 
#=GS A0A071LWC2/471-523  AC A0A071LWC2
#=GS A0A071LWC2/471-523  OS Mangrovibacter sp. MFB070
#=GS A0A071LWC2/471-523  DE ATPase AAA
#=GS A0A071LWC2/471-523  DR GENE3D; e37b0e62eb54da6306ab60ed82f82232/471-523; 
#=GS A0A071LWC2/471-523  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Mangrovibacter; Mangrovibacter sp. MFB070; 
#=GS P54930/466-517      AC P54930
#=GS P54930/466-517      OS Pantoea agglomerans
#=GS P54930/466-517      DE Nif-specific regulatory protein
#=GS P54930/466-517      DR GENE3D; fa121de20540f6e8907941c67fcd679d/466-517; 
#=GS P54930/466-517      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group; Pantoea agglomerans; 
#=GS H2J2H9/466-517      AC H2J2H9
#=GS H2J2H9/466-517      OS Rahnella aquatilis CIP 78.65 = ATCC 33071
#=GS H2J2H9/466-517      DE Nif-specific regulatory protein
#=GS H2J2H9/466-517      DR GENE3D; fa121de20540f6e8907941c67fcd679d/466-517; 
#=GS H2J2H9/466-517      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Rahnella; Rahnella aquatilis; 
#=GS G7LK20/475-528      AC G7LK20
#=GS G7LK20/475-528      OS Brenneria sp. EniD312
#=GS G7LK20/475-528      DE Transcriptional regulator, NifA, Fis Family
#=GS G7LK20/475-528      DR GENE3D; c1dbc8d37a92a2d94de04ac2e7251985/475-528; 
#=GS G7LK20/475-528      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Brenneria; Brenneria sp. EniD312; 
#=GS C4L955/484-529      AC C4L955
#=GS C4L955/484-529      OS Tolumonas auensis DSM 9187
#=GS C4L955/484-529      DE Transcriptional regulator, NifA, Fis Family
#=GS C4L955/484-529      DR GENE3D; 53158a9fa872d6aa25e50bec9725f8e5/484-529; 
#=GS C4L955/484-529      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas; Tolumonas auensis; 
#=GF TC 114.9 4.7E-37
#=GF SQ 9
Q6D306/479-523              --------------LDERQRVIAALEKTGWVQAKAARLLGMTPRQVAYRIQTMDINMHR-
E0SHZ4/467-522              ---AAAEEGWLDQNLDERQRLIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINMHR-
C6C8V2/465-523              VPTPSQEEGWLDQNLDERQRLIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINVHR-
V3TL36/470-522              ------DESWLDQSLDERQRLIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINMHR-
A0A071LWC2/471-523          -------EDWLDQSLDERQRIIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINMHRF
P54930/466-517              -------ESWLDQELDERQRVIAALEKTGWVQAKAARLLGMTPRQIAYRIQIMDINMHR-
H2J2H9/466-517              -------ESWLDQELDERQRVIAALEKTGWVQAKAARLLGMTPRQIAYRIQIMDINMHR-
G7LK20/475-528              ------SEPGIENIQDERQRLIAALERTGWVQAKAARLLGMTPRQVAYRIQIMNINMQRM
C4L955/484-529              -------------QLDERQRLIAALERCGWVQAKAARLLGMTPRQIAYRIQIMNINMRR-
#=GC scorecons              000000042333327999996999997799999999999999999799999796997690
#=GC scorecons_70           ______________******_**************************************_
#=GC scorecons_80           _______________*****_******_*************************_***_*_
#=GC scorecons_90           _______________*****_*****__*****************_*****_*_**__*_
//