# STOCKHOLM 1.0 #=GF ID 1.10.10.60/FF/36647 #=GF DE Transcriptional regulator, AraC family #=GF AC 1.10.10.60/FF/36647 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 65.219 #=GS P76241/159-265 AC P76241 #=GS P76241/159-265 OS Escherichia coli K-12 #=GS P76241/159-265 DE HTH-type transcriptional regulator NimR #=GS P76241/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS P76241/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS P76241/159-265 DR GO; GO:0003677; GO:0045892; #=GS A8AHH8/158-260 AC A8AHH8 #=GS A8AHH8/158-260 OS Citrobacter koseri ATCC BAA-895 #=GS A8AHH8/158-260 DE Uncharacterized protein #=GS A8AHH8/158-260 DR GENE3D; 09d08f0c2b70cc95e612d40802cbc9fb/158-260; #=GS A8AHH8/158-260 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter koseri; #=GS A0A0M3F3D5/152-255 AC A0A0M3F3D5 #=GS A0A0M3F3D5/152-255 OS Enterobacter cloacae #=GS A0A0M3F3D5/152-255 DE AraC family transcriptional regulator #=GS A0A0M3F3D5/152-255 DR GENE3D; 0fa199848738980ad4e5753836c18b58/152-255; #=GS A0A0M3F3D5/152-255 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; #=GS A0A0G3Q700/157-259 AC A0A0G3Q700 #=GS A0A0G3Q700/157-259 OS Kluyvera intermedia #=GS A0A0G3Q700/157-259 DE AraC family transcriptional regulator #=GS A0A0G3Q700/157-259 DR GENE3D; 23cc58b3d8a560a22c88e791305ac076/157-259; #=GS A0A0G3Q700/157-259 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kluyvera; Kluyvera intermedia; #=GS A0A181Y2D1/157-259 AC A0A181Y2D1 #=GS A0A181Y2D1/157-259 OS Klebsiella oxytoca #=GS A0A181Y2D1/157-259 DE Transcriptional regulator #=GS A0A181Y2D1/157-259 DR GENE3D; 3407da507b606142cf498b08f2ccf579/157-259; #=GS A0A181Y2D1/157-259 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella oxytoca; #=GS A0A1A0DW39/157-259 AC A0A1A0DW39 #=GS A0A1A0DW39/157-259 OS Raoultella planticola #=GS A0A1A0DW39/157-259 DE AraC family transcriptional regulator #=GS A0A1A0DW39/157-259 DR GENE3D; 3407da507b606142cf498b08f2ccf579/157-259; #=GS A0A1A0DW39/157-259 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Raoultella; Raoultella planticola; #=GS A0A1C4DCZ3/157-258 AC A0A1C4DCZ3 #=GS A0A1C4DCZ3/157-258 OS Kosakonia oryzendophytica #=GS A0A1C4DCZ3/157-258 DE AraC-type DNA-binding protein #=GS A0A1C4DCZ3/157-258 DR GENE3D; 4e6386e59e84fc1812038deb2ea801c7/157-258; #=GS A0A1C4DCZ3/157-258 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kosakonia; Kosakonia oryzendophytica; #=GS A0A127L3G7/157-258 AC A0A127L3G7 #=GS A0A127L3G7/157-258 OS Enterobacter sp. FY-07 #=GS A0A127L3G7/157-258 DE AraC family transcriptional regulator #=GS A0A127L3G7/157-258 DR GENE3D; 4e6386e59e84fc1812038deb2ea801c7/157-258; #=GS A0A127L3G7/157-258 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter sp. FY-07; #=GS A0A0B5IW94/157-260 AC A0A0B5IW94 #=GS A0A0B5IW94/157-260 OS Raoultella ornithinolytica #=GS A0A0B5IW94/157-260 DE AraC family transcriptional regulator #=GS A0A0B5IW94/157-260 DR GENE3D; 69639b012c332facb2f5f88fdfe348a0/157-260; #=GS A0A0B5IW94/157-260 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Raoultella; Raoultella ornithinolytica; #=GS A4W9G5/158-260 AC A4W9G5 #=GS A4W9G5/158-260 OS Enterobacter sp. 638 #=GS A4W9G5/158-260 DE Transcriptional regulator, AraC family #=GS A4W9G5/158-260 DR GENE3D; 8a1990fd4961900cedc095a3368c2e6a/158-260; #=GS A4W9G5/158-260 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter sp. 638; #=GS S0TP20/158-259 AC S0TP20 #=GS S0TP20/158-259 OS Escherichia sp. KTE114 #=GS S0TP20/158-259 DE Transcriptional regulator YeaM #=GS S0TP20/158-259 DR GENE3D; 9a09a008e992979ce798a9f1d559dcc0/158-259; #=GS S0TP20/158-259 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia sp. KTE114; #=GS A0A089PPD1/157-260 AC A0A089PPD1 #=GS A0A089PPD1/157-260 OS Pluralibacter gergoviae #=GS A0A089PPD1/157-260 DE AraC family transcriptional regulator #=GS A0A089PPD1/157-260 DR GENE3D; 9dea43096585b06299054bfbcffe0768/157-260; #=GS A0A089PPD1/157-260 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pluralibacter; Pluralibacter gergoviae; #=GS J2FMK5/1-64 AC J2FMK5 #=GS J2FMK5/1-64 OS Shigella sonnei str. Moseley #=GS J2FMK5/1-64 DE Bacterial regulatory helix-turn-helix s, AraC family protein #=GS J2FMK5/1-64 DR GENE3D; b8d03534704734a16e0f8741efe68c3f/1-64; #=GS J2FMK5/1-64 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella sonnei; #=GS D8AV56/159-265 AC D8AV56 #=GS D8AV56/159-265 OS Escherichia coli MS 116-1 #=GS D8AV56/159-265 DE Transcriptional regulator, AraC family #=GS D8AV56/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS D8AV56/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS F4SKL4/159-265 AC F4SKL4 #=GS F4SKL4/159-265 OS Escherichia coli H736 #=GS F4SKL4/159-265 DE Putative ARAC-type regulatory protein #=GS F4SKL4/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS F4SKL4/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A142UY05/159-265 AC A0A142UY05 #=GS A0A142UY05/159-265 OS Escherichia coli str. Sanji #=GS A0A142UY05/159-265 DE AraC family transcriptional regulator #=GS A0A142UY05/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS A0A142UY05/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS E1HI33/159-265 AC E1HI33 #=GS E1HI33/159-265 OS Escherichia coli MS 146-1 #=GS E1HI33/159-265 DE Transcriptional regulator, AraC family #=GS E1HI33/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS E1HI33/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A037YCN9/159-265 AC A0A037YCN9 #=GS A0A037YCN9/159-265 OS Escherichia coli #=GS A0A037YCN9/159-265 DE AraC family transcriptional regulator #=GS A0A037YCN9/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS A0A037YCN9/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS D8B8Y6/159-265 AC D8B8Y6 #=GS D8B8Y6/159-265 OS Escherichia coli MS 175-1 #=GS D8B8Y6/159-265 DE Transcriptional regulator, AraC family #=GS D8B8Y6/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS D8B8Y6/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0P8CKN2/159-265 AC A0A0P8CKN2 #=GS A0A0P8CKN2/159-265 OS Escherichia coli TW10598 #=GS A0A0P8CKN2/159-265 DE Putative HTH-type transcriptional regulator YeaM #=GS A0A0P8CKN2/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS A0A0P8CKN2/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS V1A2Z3/159-265 AC V1A2Z3 #=GS V1A2Z3/159-265 OS Escherichia coli 908658 #=GS V1A2Z3/159-265 DE Transcriptional regulator, AraC family #=GS V1A2Z3/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS V1A2Z3/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS W0FSN8/159-265 AC W0FSN8 #=GS W0FSN8/159-265 OS uncultured bacterium Contig342 #=GS W0FSN8/159-265 DE Transcriptional regulator, AraC family #=GS W0FSN8/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS W0FSN8/159-265 DR ORG; Bacteria; uncultured bacterium Contig342; #=GS A0A1J0HC15/159-265 AC A0A1J0HC15 #=GS A0A1J0HC15/159-265 OS Escherichia coli str. K-12 substr. W3110 #=GS A0A1J0HC15/159-265 DE AraC family transcriptional regulator #=GS A0A1J0HC15/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS A0A1J0HC15/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS H4UK02/159-265 AC H4UK02 #=GS H4UK02/159-265 OS Escherichia coli DEC6A #=GS H4UK02/159-265 DE Bacterial regulatory helix-turn-helix s, AraC family protein #=GS H4UK02/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS H4UK02/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS D8BTR1/159-265 AC D8BTR1 #=GS D8BTR1/159-265 OS Escherichia coli MS 196-1 #=GS D8BTR1/159-265 DE Transcriptional regulator, AraC family #=GS D8BTR1/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS D8BTR1/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0E1LY83/159-265 AC A0A0E1LY83 #=GS A0A0E1LY83/159-265 OS Escherichia coli 1303 #=GS A0A0E1LY83/159-265 DE Putative DNA-binding transcriptional regulator #=GS A0A0E1LY83/159-265 DR GENE3D; e173fee78fd5016f2790d2d6e479eb65/159-265; #=GS A0A0E1LY83/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0K3WK66/1-87 AC A0A0K3WK66 #=GS A0A0K3WK66/1-87 OS Escherichia coli #=GS A0A0K3WK66/1-87 DE Putative ARAC-type regulatory protein #=GS A0A0K3WK66/1-87 DR GENE3D; ef2103578e33e82ad40d92ed782e3c0b/1-87; #=GS A0A0K3WK66/1-87 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GF TC 165.2 1.4E-53 #=GF SQ 27 P76241/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A8AHH8/158-260 PKIRQMVETMAREPARWQTLGQWASLFAMSERNLARLVVKETGLSFRRWRHQLQLILALQALIDGHSVQHVAQTLGYDSTTAFITMFKKGLGQTPGRYLAGLT----- A0A0M3F3D5/152-255 PKIRQMSEMMIAQPAAWQTLHQWARHFAMSERNLARLVVNETGLSFRRWRHQLQLIVALQALISGQTVQQVAQMLGYDSTTAFITMFKKGLGQTPARYIASLAT---- A0A0G3Q700/157-259 YKIRQMVETMEQAPARWQTLGQWAQEFAMSERNLARLVVKETGLSFRRWRHQMLLILSLRLLIGGESVQNVAQALGYDSTTAFITMFKKGLGQTPGRYLATLG----- A0A181Y2D1/157-259 PKIRQMADFMAVDPARWQTLGQWAAEFAMSERNLARLVVRETGLSFRRWRHQLQLILALQMLIRGQTVQQTAQTLGYDSTTAFITMFKKGLGQTPGRYLASLV----- A0A1A0DW39/157-259 PKIRQMADFMAVDPARWQTLGQWAAEFAMSERNLARLVVRETGLSFRRWRHQLQLILALQMLIRGQTVQQTAQTLGYDSTTAFITMFKKGLGQTPGRYLASLV----- A0A1C4DCZ3/157-258 PKIYQMVESMEADPAGRQTLAQWAQTFAMSERNLARLVVKETGLSFRRWRHQMQLILALRLLIGGQSVQQIAHTLGYDSTTAFITMFKKGLGQTPGRYLSGV------ A0A127L3G7/157-258 PKIYQMVESMEADPAGRQTLAQWAQTFAMSERNLARLVVKETGLSFRRWRHQMQLILALRLLIGGQSVQQIAHTLGYDSTTAFITMFKKGLGQTPGRYLSGV------ A0A0B5IW94/157-260 PKIRQMAELMAVAPAQWQTLGQWAAEFAMSERNLARLVVRETGLSFRRWRHQLQLILALQMLIRGQTVQQTAHGLGYDSTTAFITMFKKGLGQSPGRYLASLTT---- A4W9G5/158-260 -KIRMMSNTMAEQPAEWQTLAQWASHFAMSERNLARLVVKETGLSFRRWRHQLQLIVALQLLIGGKSVQQVAQSLGYDSTTAFITMFRKGLGQTPGRYIASLST---- S0TP20/158-259 -KIRVMVDTMAKEPVEWGTLGQWANFFAMSERNLARLIVKETGLSFRQWRHQLQLILALQRLVNGDSVQKVAHMLGYDSTTAFITMFKKGLGQTPGRYIAGLT----- A0A089PPD1/157-260 PKIRQMVDSMAAEPTHRQTLGEWARRLAMSERNLSRLVVRETGMSFRRWRQQLQLILALQGLVRGQSVQQVAHALGYDSTTAFITMFRKGLGQTPGRYLSSLAT---- J2FMK5/1-64 -------------------------------------------MSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSP- D8AV56/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ F4SKL4/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A0A142UY05/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ E1HI33/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A0A037YCN9/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ D8B8Y6/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A0A0P8CKN2/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ V1A2Z3/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ W0FSN8/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A0A1J0HC15/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ H4UK02/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ D8BTR1/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A0A0E1LY83/159-265 -KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ A0A0K3WK66/1-87 -------------------MGQWAGFFAMSERNLTRLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVS-- #=GC scorecons 166536453643364353465677336777777767757577779996996978996897497595699679769999999999999899999898996748442211 #=GC scorecons_70 _**__*___*___*_____*_***__***********_*_********************_**_*_***_******************************_*______ #=GC scorecons_80 ______________________**___*******_**_*_*******_**_*****_***_*__*__**__**_************************_*_*______ #=GC scorecons_90 ____________________________________________***_**_*_***_**__*__*__**__*__************************___*______ //