# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/16346
#=GF DE HHEX ortholog
#=GF AC 1.10.10.60/FF/16346
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 32.014
#=GS Q9VDF0/188-263      AC Q9VDF0
#=GS Q9VDF0/188-263      OS Drosophila melanogaster
#=GS Q9VDF0/188-263      DE HHEX ortholog
#=GS Q9VDF0/188-263      DR GENE3D; 62611a12233e935e4e38ac3cd26d0179/188-263; 
#=GS Q9VDF0/188-263      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VDF0/188-263      DR GO; GO:0003700; GO:0005634; GO:0006006; GO:0006357; GO:0009744; GO:0048813; 
#=GS Q293K4/192-277      AC Q293K4
#=GS Q293K4/192-277      OS Drosophila pseudoobscura pseudoobscura
#=GS Q293K4/192-277      DE Uncharacterized protein
#=GS Q293K4/192-277      DR GENE3D; 10bc078d4881c2ce7f1ce53dd6deadcf/192-277; 
#=GS Q293K4/192-277      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4NH50/209-282      AC B4NH50
#=GS B4NH50/209-282      OS Drosophila willistoni
#=GS B4NH50/209-282      DE Uncharacterized protein
#=GS B4NH50/209-282      DR GENE3D; 3a772cdd3705632d51e2769e215caf98/209-282; 
#=GS B4NH50/209-282      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B3P2Y7/188-265      AC B3P2Y7
#=GS B3P2Y7/188-265      OS Drosophila erecta
#=GS B3P2Y7/188-265      DE GG14915
#=GS B3P2Y7/188-265      DR GENE3D; 556e53238dfb160ca55631e66e0891ef/188-265; 
#=GS B3P2Y7/188-265      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4JFF1/179-257      AC B4JFF1
#=GS B4JFF1/179-257      OS Drosophila grimshawi
#=GS B4JFF1/179-257      DE GH19308
#=GS B4JFF1/179-257      DR GENE3D; 5d618bea7e735f8b172726fe0f7602cb/179-257; 
#=GS B4JFF1/179-257      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4GM04/192-277      AC B4GM04
#=GS B4GM04/192-277      OS Drosophila persimilis
#=GS B4GM04/192-277      DE GL12681
#=GS B4GM04/192-277      DR GENE3D; 6175c82e0e52cd79252ec364c187ba3e/192-277; 
#=GS B4GM04/192-277      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B3M2W7/199-265      AC B3M2W7
#=GS B3M2W7/199-265      OS Drosophila ananassae
#=GS B3M2W7/199-265      DE Uncharacterized protein
#=GS B3M2W7/199-265      DR GENE3D; 8007c0e56c751917874add71f0f7a982/199-265; 
#=GS B3M2W7/199-265      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4IKL5/183-260      AC B4IKL5
#=GS B4IKL5/183-260      OS Drosophila sechellia
#=GS B4IKL5/183-260      DE GM15106
#=GS B4IKL5/183-260      DR GENE3D; a7e3e0b296d89300c0d52dceacfc002f/183-260; 
#=GS B4IKL5/183-260      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0L0CK17/211-285  AC A0A0L0CK17
#=GS A0A0L0CK17/211-285  OS Lucilia cuprina
#=GS A0A0L0CK17/211-285  DE Uncharacterized protein
#=GS A0A0L0CK17/211-285  DR GENE3D; b0a48e7fa3a3b19f87416b9e8a3f82d1/211-285; 
#=GS A0A0L0CK17/211-285  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia; Lucilia cuprina; 
#=GS B4M4A6/171-246      AC B4M4A6
#=GS B4M4A6/171-246      OS Drosophila virilis
#=GS B4M4A6/171-246      DE Uncharacterized protein
#=GS B4M4A6/171-246      DR GENE3D; d9e3a4cc7f3c336ae72170045c938865/171-246; 
#=GS B4M4A6/171-246      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4R151/183-258      AC B4R151
#=GS B4R151/183-258      OS Drosophila simulans
#=GS B4R151/183-258      DE GD20010
#=GS B4R151/183-258      DR GENE3D; e9efa7e24a3792b278a768fa5824b162/183-258; 
#=GS B4R151/183-258      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4K653/164-241      AC B4K653
#=GS B4K653/164-241      OS Drosophila mojavensis
#=GS B4K653/164-241      DE Uncharacterized protein
#=GS B4K653/164-241      DR GENE3D; fd752575719b4dff56381dfadf32b26a/164-241; 
#=GS B4K653/164-241      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GF TC 169.3 7.5E-54
#=GF SQ 12
Q9VDF0/188-263              SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQG--------------
Q293K4/192-277              ----VKRKGGQIRFTSQQTKNLEGRFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLTKRSGSAAGSAGASSTAPSSNSS
B4NH50/209-282              SNFGVKRKGGQIRFTSQQTKNLESRFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRSNQTKRSLGT----------------
B3P2Y7/188-265              SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGVA------------
B4JFF1/179-257              SNFGVKRKGGQIRFTSQQTKNLENRFSSSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANQTKRSANANASVA-----------
B4GM04/192-277              ----VKRKGGQIRFTSQQTKNLEGRFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLTKRSGSAAGSAGASSTAPSSNSS
B3M2W7/199-265              ----VKRKGGQIRFTSQQTKNLEGRFASHKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRS-------------------
B4IKL5/183-260              SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGAI------------
A0A0L0CK17/211-285          ---GVKRKGGQIRFTSQQTKNLENRFNSSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANQAKRSSHYLHAA------------
B4M4A6/171-246              SNFGVKRKGGQIRFTSQQTKNLENRFSSSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANQTKRSGSAAA--------------
B4R151/183-258              SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQG--------------
B4K653/164-241              SNFGVKRKGGQIRFTSQQTKNLENRFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANQTKRQSNHATAT------------
#=GC scorecons              222399999999999999999994996979999999999999999999999999999999999989559973442312000000000000
#=GC scorecons_70           ____*******************_******************************************__***___________________
#=GC scorecons_80           ____*******************_**_***************************************__***___________________
#=GC scorecons_90           ____*******************_**_*_*************************************__**____________________
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