# STOCKHOLM 1.0 #=GF ID 1.10.10.60/FF/125085 #=GF DE Transcriptional regulator AraC family #=GF AC 1.10.10.60/FF/125085 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 77.883 #=GS P77634/157-265 AC P77634 #=GS P77634/157-265 OS Escherichia coli K-12 #=GS P77634/157-265 DE Uncharacterized HTH-type transcriptional regulator YbcM #=GS P77634/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS P77634/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS P77634/157-265 DR GO; GO:0006974; GO:0046677; #=GS Q9KT29/152-250 AC Q9KT29 #=GS Q9KT29/152-250 OS Vibrio cholerae O1 biovar El Tor str. N16961 #=GS Q9KT29/152-250 DE Transcriptional regulator, AraC/XylS family #=GS Q9KT29/152-250 DR GENE3D; faa52fecd238019163b9d0e33899c864/152-250; #=GS Q9KT29/152-250 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS Q9KT29/152-250 DR GO; GO:0003700; GO:0006355; #=GS A0A0A2WK44/158-266 AC A0A0A2WK44 #=GS A0A0A2WK44/158-266 OS Beauveria bassiana D1-5 #=GS A0A0A2WK44/158-266 DE Putative HTH-type transcriptional regulator ybcM #=GS A0A0A2WK44/158-266 DR GENE3D; 67cd711098714982126c795403fb09e5/158-266; #=GS A0A0A2WK44/158-266 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Beauveria; Beauveria bassiana; #=GS A0A085U7P0/154-268 AC A0A085U7P0 #=GS A0A085U7P0/154-268 OS Yersinia ruckeri #=GS A0A085U7P0/154-268 DE Putative HTH-type transcriptional regulator ybcM #=GS A0A085U7P0/154-268 DR GENE3D; 22726913455257292611999927eff546/154-268; #=GS A0A085U7P0/154-268 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia ruckeri; #=GS A0A0K4HAQ1/159-265 AC A0A0K4HAQ1 #=GS A0A0K4HAQ1/159-265 OS Escherichia coli #=GS A0A0K4HAQ1/159-265 DE DNA-binding transcriptional regulator; DLP12 prophage #=GS A0A0K4HAQ1/159-265 DR GENE3D; 3a9124f014409bb73574c9528f6aa216/159-265; #=GS A0A0K4HAQ1/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS W0AIX0/159-265 AC W0AIX0 #=GS W0AIX0/159-265 OS Escherichia albertii KF1 #=GS W0AIX0/159-265 DE Transcriptional regulator #=GS W0AIX0/159-265 DR GENE3D; 3a9124f014409bb73574c9528f6aa216/159-265; #=GS W0AIX0/159-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia albertii; #=GS A0A0D5WZH8/158-266 AC A0A0D5WZH8 #=GS A0A0D5WZH8/158-266 OS Klebsiella michiganensis #=GS A0A0D5WZH8/158-266 DE Transcriptional regulator #=GS A0A0D5WZH8/158-266 DR GENE3D; 67cd711098714982126c795403fb09e5/158-266; #=GS A0A0D5WZH8/158-266 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella michiganensis; #=GS D0HFQ2/152-259 AC D0HFQ2 #=GS D0HFQ2/152-259 OS Vibrio mimicus VM223 #=GS D0HFQ2/152-259 DE Transcriptional regulator AraC family #=GS D0HFQ2/152-259 DR GENE3D; 6b99d82b8e3c0979e92e87326b56555e/152-259; #=GS D0HFQ2/152-259 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio mimicus; #=GS T5NUU9/157-265 AC T5NUU9 #=GS T5NUU9/157-265 OS Escherichia coli HVH 6 (3-8296502) #=GS T5NUU9/157-265 DE Phage transcriptional regulator #=GS T5NUU9/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS T5NUU9/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS E9YYK4/157-265 AC E9YYK4 #=GS E9YYK4/157-265 OS Escherichia coli M863 #=GS E9YYK4/157-265 DE AraC family protein regulatory helix-turn-helix domain-containing protein #=GS E9YYK4/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS E9YYK4/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0E0V1N5/157-265 AC A0A0E0V1N5 #=GS A0A0E0V1N5/157-265 OS Escherichia coli O7:K1 str. CE10 #=GS A0A0E0V1N5/157-265 DE DLP12 prophage, predicted DNA-binding transcriptional regulator #=GS A0A0E0V1N5/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A0E0V1N5/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0F6F964/157-265 AC A0A0F6F964 #=GS A0A0F6F964/157-265 OS Escherichia coli O157:H7 str. SS52 #=GS A0A0F6F964/157-265 DE Transcriptional regulator, AraC/XylS family #=GS A0A0F6F964/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A0F6F964/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A070DDI2/157-265 AC A0A070DDI2 #=GS A0A070DDI2/157-265 OS Escherichia coli O146:H21 str. 2010C-3325 #=GS A0A070DDI2/157-265 DE Transcriptional regulator #=GS A0A070DDI2/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A070DDI2/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A023KG95/157-265 AC A0A023KG95 #=GS A0A023KG95/157-265 OS Escherichia coli #=GS A0A023KG95/157-265 DE DNA-binding transcriptional regulator; DLP12 prophage #=GS A0A023KG95/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A023KG95/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS G0FDL3/157-265 AC G0FDL3 #=GS G0FDL3/157-265 OS Escherichia coli UMNF18 #=GS G0FDL3/157-265 DE Uncharacterized HTH-type transcriptional regulator ybcM #=GS G0FDL3/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS G0FDL3/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS I2WS12/157-265 AC I2WS12 #=GS I2WS12/157-265 OS Escherichia coli 4.0967 #=GS I2WS12/157-265 DE Uncharacterized protein #=GS I2WS12/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS I2WS12/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS L3PDD8/157-265 AC L3PDD8 #=GS L3PDD8/157-265 OS Escherichia coli KTE66 #=GS L3PDD8/157-265 DE Phage transcriptional regulator #=GS L3PDD8/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS L3PDD8/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS I2XFZ8/157-265 AC I2XFZ8 #=GS I2XFZ8/157-265 OS Escherichia coli 2.3916 #=GS I2XFZ8/157-265 DE Uncharacterized protein #=GS I2XFZ8/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS I2XFZ8/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS S1C961/157-265 AC S1C961 #=GS S1C961/157-265 OS Escherichia sp. KTE52 #=GS S1C961/157-265 DE Transcriptional regulator YbcM #=GS S1C961/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS S1C961/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia sp. KTE52; #=GS A0A1J0H8I2/157-265 AC A0A1J0H8I2 #=GS A0A1J0H8I2/157-265 OS Escherichia coli str. K-12 substr. W3110 #=GS A0A1J0H8I2/157-265 DE AraC family transcriptional regulator #=GS A0A1J0H8I2/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A1J0H8I2/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS V0ZEW5/157-265 AC V0ZEW5 #=GS V0ZEW5/157-265 OS Escherichia coli 908573 #=GS V0ZEW5/157-265 DE Transcriptional regulator, AraC family #=GS V0ZEW5/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS V0ZEW5/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A142H088/157-265 AC A0A142H088 #=GS A0A142H088/157-265 OS Shigella sp. PAMC 28760 #=GS A0A142H088/157-265 DE Transcriptional regulator #=GS A0A142H088/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A142H088/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella sp. PAMC 28760; #=GS A0A140NCJ2/157-265 AC A0A140NCJ2 #=GS A0A140NCJ2/157-265 OS Escherichia coli BL21(DE3) #=GS A0A140NCJ2/157-265 DE Transcriptional regulator, AraC family #=GS A0A140NCJ2/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS A0A140NCJ2/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS T6AQR0/157-265 AC T6AQR0 #=GS T6AQR0/157-265 OS Escherichia coli HVH 41 (4-2677849) #=GS T6AQR0/157-265 DE Phage transcriptional regulator #=GS T6AQR0/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS T6AQR0/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS L3QCU5/157-265 AC L3QCU5 #=GS L3QCU5/157-265 OS Escherichia coli KTE75 #=GS L3QCU5/157-265 DE Phage transcriptional regulator #=GS L3QCU5/157-265 DR GENE3D; 91be061971f54c79b3849275a50f0bff/157-265; #=GS L3QCU5/157-265 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0H6WEI2/88-196 AC A0A0H6WEI2 #=GS A0A0H6WEI2/88-196 OS Vibrio cholerae #=GS A0A0H6WEI2/88-196 DE AraC family transcriptional regulator #=GS A0A0H6WEI2/88-196 DR GENE3D; a1bbff2a949a6db2f7f877ae5f3838bf/88-196; #=GS A0A0H6WEI2/88-196 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GF TC 0.0 0.0E+00 #=GF SQ 26 P77634/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- Q9KT29/152-250 -SDNASMRERLARYLSVNPGDEHNIETVSAHFAMSRATLARHLAAEGTGFREVLSEVRMNYALALLQEL-RPLMEVAVACGYQSLTRFSARFKQQYRLRLI--------------- A0A0A2WK44/158-266 -HPQDSLVSRCQNLLLANPGARWTAPEMARQLFMSTSTLRRHLAAEGESFQNLLDDVRLNNALAAIQTTHTPISEVARENGYLCPSRFTARFQKRFQITPRALRQAAKAQ------ A0A085U7P0/154-268 -SSDNTVTARCQDLLILSPSARWSARTVAEQLHMSVSTFHRHLAAEGGSFQQILDDVRLGNALNAIQTTSKPIGEIARDNGYQCPSRFTSRFQKRYQITPRALRQAIQAKDRADDG A0A0K4HAQ1/159-265 --SKQPLINRCYNLLVSDPGAKWTADKVARHLYISVSTLHRRLANEGVSFQSILDDVRLNNALSTIQTTLKPISEIARENGYKCPSRFTERFHNRFKITPRELRKAAKE------- W0AIX0/159-265 --SKQPLINRCYNLLVSDPGAKWTADKVARHLYISVSTLHRRLANEGVSFQSILDDVRLNNALSTIQTTLKPISEIARENGYKCPSRFTERFHNRFKITPRELRKAAKE------- A0A0D5WZH8/158-266 -HPQDSLVSRCQNLLLANPGARWTAPEMARQLFMSTSTLRRHLAAEGESFQNLLDDVRLNNALAAIQTTHTPISEVARENGYLCPSRFTARFQKRFQITPRALRQAAKAQ------ D0HFQ2/152-259 -SENASMRERLARYLSVNPGDEHSIETVAAHFAMSRATLARYLAAEGTGFRDVLSEVRMNYALVLLQEL-RPLMDVAVACGYQSLTRFSARFKQQYRLTPYQYRQTLTDK------ T5NUU9/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- E9YYK4/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A0E0V1N5/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A0F6F964/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A070DDI2/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A023KG95/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- G0FDL3/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- I2WS12/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- L3PDD8/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- I2XFZ8/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- S1C961/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A1J0H8I2/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- V0ZEW5/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A142H088/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A140NCJ2/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- T6AQR0/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- L3QCU5/157-265 SYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE------- A0A0H6WEI2/88-196 -SDNASMRERLARYLSVNPGDEHNIETVSAHFAMSRATLARHLAAEGTGFREVLSEVRMNYALALLQEL-RPLMEVAVACGYQSLTRFSARFKQQYRLTPYQYLQTITDKP----- #=GC scorecons 14554764595455944598455564477556469469859599599469646967997859955695526965879555995666996599556746775435553440000000 #=GC scorecons_70 _____**__*____*___**_______**__*_**_***_*_**_**_***_**_*****_**__**____**_***___**_*_****_**__**_***________________ #=GC scorecons_80 _____*___*____*___**_______*______*__**_*_**_**__*___*_***_*_**___*____*__*_*___**____**__**___*__**________________ #=GC scorecons_90 _________*____*___**______________*__**_*_**_**__*___*__**___**___*____*__*_*___**____**__**________________________ //