# STOCKHOLM 1.0 #=GF ID 1.10.10.60/FF/124528 #=GF DE HTH-type transcriptional activator RhaR #=GF AC 1.10.10.60/FF/124528 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 73.760 #=GS J9M4F8/340-438 AC J9M4F8 #=GS J9M4F8/340-438 OS Acyrthosiphon pisum #=GS J9M4F8/340-438 DE Uncharacterized protein #=GS J9M4F8/340-438 DR GENE3D; c87d4722dde528b93a894bf8ee61382b/340-438; #=GS J9M4F8/340-438 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Aphidinae; Macrosiphini; Acyrthosiphon; Acyrthosiphon pisum; #=GS A0A0T9U4K4/174-280 AC A0A0T9U4K4 #=GS A0A0T9U4K4/174-280 OS Yersinia frederiksenii #=GS A0A0T9U4K4/174-280 DE HTH-type transcriptional activator RhaR #=GS A0A0T9U4K4/174-280 DR GENE3D; 92f34fd95c9a8190abc284f6c4b2f69f/174-280; #=GS A0A0T9U4K4/174-280 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia frederiksenii; #=GS E1SDK9/171-277 AC E1SDK9 #=GS E1SDK9/171-277 OS Pantoea vagans C9-1 #=GS E1SDK9/171-277 DE HTH-type transcriptional activator RhaR #=GS E1SDK9/171-277 DR GENE3D; 94071e11647d782f496da6aaf788eddf/171-277; #=GS E1SDK9/171-277 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; Pantoea vagans; #=GS Q65Q30/167-274 AC Q65Q30 #=GS Q65Q30/167-274 OS Mannheimia succiniciproducens MBEL55E #=GS Q65Q30/167-274 DE HTH-type transcriptional activator RhaR #=GS Q65Q30/167-274 DR GENE3D; a8190a53a0d4f0b3127f9674f8e276a7/167-274; #=GS Q65Q30/167-274 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Basfia; [Mannheimia] succiniciproducens; #=GS A0A154MGB4/174-279 AC A0A154MGB4 #=GS A0A154MGB4/174-279 OS Yersinia pestis #=GS A0A154MGB4/174-279 DE HTH-type transcriptional activator RhaR #=GS A0A154MGB4/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS A0A154MGB4/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A0E1P1Q9/174-279 AC A0A0E1P1Q9 #=GS A0A0E1P1Q9/174-279 OS Yersinia pestis Antiqua #=GS A0A0E1P1Q9/174-279 DE HTH-type transcriptional activator RhaR #=GS A0A0E1P1Q9/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS A0A0E1P1Q9/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS Q8ZIZ9/174-279 AC Q8ZIZ9 #=GS Q8ZIZ9/174-279 OS Yersinia pestis #=GS Q8ZIZ9/174-279 DE HTH-type transcriptional activator RhaR #=GS Q8ZIZ9/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS Q8ZIZ9/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A0U1EVL9/174-279 AC A0A0U1EVL9 #=GS A0A0U1EVL9/174-279 OS Yersinia intermedia #=GS A0A0U1EVL9/174-279 DE HTH-type transcriptional activator RhaR #=GS A0A0U1EVL9/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS A0A0U1EVL9/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia intermedia; #=GS Q1C0W2/174-279 AC Q1C0W2 #=GS Q1C0W2/174-279 OS Yersinia pestis Antiqua #=GS Q1C0W2/174-279 DE HTH-type transcriptional activator RhaR #=GS Q1C0W2/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS Q1C0W2/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A4TRS7/174-279 AC A4TRS7 #=GS A4TRS7/174-279 OS Yersinia pestis Pestoides F #=GS A4TRS7/174-279 DE HTH-type transcriptional activator RhaR #=GS A4TRS7/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS A4TRS7/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A9QYR6/174-279 AC A9QYR6 #=GS A9QYR6/174-279 OS Yersinia pestis Angola #=GS A9QYR6/174-279 DE HTH-type transcriptional activator RhaR #=GS A9QYR6/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS A9QYR6/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A0M1VBU7/174-279 AC A0A0M1VBU7 #=GS A0A0M1VBU7/174-279 OS Yersinia pestis biovar Orientalis str. IP275 #=GS A0A0M1VBU7/174-279 DE HTH-type transcriptional activator RhaR #=GS A0A0M1VBU7/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS A0A0M1VBU7/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; Yersinia pestis subsp. pestis; #=GS Q1CEB6/174-279 AC Q1CEB6 #=GS Q1CEB6/174-279 OS Yersinia pestis Nepal516 #=GS Q1CEB6/174-279 DE HTH-type transcriptional activator RhaR #=GS Q1CEB6/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS Q1CEB6/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS B2K1W6/174-279 AC B2K1W6 #=GS B2K1W6/174-279 OS Yersinia pseudotuberculosis PB1/+ #=GS B2K1W6/174-279 DE HTH-type transcriptional activator RhaR #=GS B2K1W6/174-279 DR GENE3D; e59a1ce00dacc60c9e4c78568c4301fa/174-279; #=GS B2K1W6/174-279 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pseudotuberculosis; #=GS A0A0A1B2Q9/170-278 AC A0A0A1B2Q9 #=GS A0A0A1B2Q9/170-278 OS Pantoea sp. PSNIH2 #=GS A0A0A1B2Q9/170-278 DE HTH-type transcriptional activator RhaR #=GS A0A0A1B2Q9/170-278 DR GENE3D; ea272de19da872dabbf5b85b9d2c0860/170-278; #=GS A0A0A1B2Q9/170-278 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; Pantoea sp. PSNIH2; #=GS A0A097QZY4/175-280 AC A0A097QZY4 #=GS A0A097QZY4/175-280 OS Hafnia alvei FB1 #=GS A0A097QZY4/175-280 DE HTH-type transcriptional activator RhaR #=GS A0A097QZY4/175-280 DR GENE3D; f3554439a8b00fbd15020afd01c76ff3/175-280; #=GS A0A097QZY4/175-280 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Hafniaceae; Hafnia; Hafnia alvei; #=GF TC 0.0 0.0E+00 #=GF SQ 16 J9M4F8/340-438 --EGEQLDLLMSALQGALHRPFDLAHFCQQNELNERALKQLFRQQTGMTVGHYLRQLQLCQAKYLLRTQDCLISEVAARCGFDDSNYFSVVFTRDTGVLFN--------- A0A0T9U4K4/174-280 --DGEQLDLIMSALQQSLGTHFDMTDFCNKNKLVERSLKQLFRQQTGMSINHYLRQIRLCHAKSLLRCSEHRISDIAARCGFDDSNYFSVVFTREAGMTPRDYRQRFVR- E1SDK9/171-277 --EGEQLDLLMSALQGALARPFDLAAFCQQNQLSERALRQLFRQQTGMTIGHYLRQLQLCQAKYLLRTQDCLISEVAARCGFDDSNYFSVVFARDTGLTPSAWRQRFIA- Q65Q30/167-274 YSDISKLESLFSALNQSISQEFYLADFCRQHQLAVSSVRRIFKQQTNMTIAQYLQKLRLCRAATLLRNTSESVANIAIRCGYSDSNYFSSVFGKTFSCTPTEYRSRFI-- A0A154MGB4/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- A0A0E1P1Q9/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- Q8ZIZ9/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- A0A0U1EVL9/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- Q1C0W2/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- A4TRS7/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- A9QYR6/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- A0A0M1VBU7/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- Q1CEB6/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- B2K1W6/174-279 --DGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFI-- A0A0A1B2Q9/170-278 -PEGEQLDLLMSAIQASTGRPFDLAAFCHHNQLSERALKQLFRQQTGMTIGHYLRQLQLCQAKYLLRSTDLLIGEVAARCGFDDSNYFSAVFTRETHFTPSAWRQRFERA A0A097QZY4/175-280 ---GEQLDLLMASLQGGLDSHFDLSAFCAEHQLVERSLKQLFRQQTGMSISHYLRQLRLCQAKRLLRRSDYRISEIATRCGFEDSNYFSVVFTRDAGLTPREYRQRFVT- #=GC scorecons 00567797667888756644396675995567946767777979997968579977669959749994453476679699985999999599675564774456566400 #=GC scorecons_70 ___************_**___****_**__***_**************_*_*********_**_***_____**_*******_******_****____**___*_**___ #=GC scorecons_80 _____***__*****______*__*_**___**____***********_*_*****__**_*__***_____*__**_****_******_**_*____**__________ #=GC scorecons_90 ______*______________*____**____*________*_***_*_*__**____**_*__***_________*_****_******_**__________________ //