# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/124524
#=GF DE AraC family transcriptional regulator
#=GF AC 1.10.10.60/FF/124524
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 58.651
#=GS A0A0T8PIK9/660-711  AC A0A0T8PIK9
#=GS A0A0T8PIK9/660-711  OS Streptococcus pneumoniae
#=GS A0A0T8PIK9/660-711  DE Chemotaxis response regulator protein-glutamate methylesterase
#=GS A0A0T8PIK9/660-711  DR GENE3D; 4990118e3c867cb981e2927a9ca29497/660-711; 
#=GS A0A0T8PIK9/660-711  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0T8PIK9/660-711  DR EC; 3.1.1.61; 
#=GS O32071/664-715      AC O32071
#=GS O32071/664-715      OS Bacillus subtilis subsp. subtilis str. 168
#=GS O32071/664-715      DE Uncharacterized HTH-type transcriptional regulator YtdP
#=GS O32071/664-715      DR GENE3D; 5102f09b59d3964b5ed471caa5081d7d/664-715; 
#=GS O32071/664-715      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A080UPA0/136-187  AC A0A080UPA0
#=GS A0A080UPA0/136-187  OS Bacillus subtilis subsp. niger
#=GS A0A080UPA0/136-187  DE Helix-turn-helix domain protein
#=GS A0A080UPA0/136-187  DR GENE3D; 024f7912ea5b35c015e66366e9f2f7ba/136-187; 
#=GS A0A080UPA0/136-187  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. niger; 
#=GS O30502/136-187      AC O30502
#=GS O30502/136-187      OS Bacillus subtilis
#=GS O30502/136-187      DE Transcription regulator
#=GS O30502/136-187      DR GENE3D; 2779ec4ccf4562e922216da90a688ced/136-187; 
#=GS O30502/136-187      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A1B2B6F5/664-715  AC A0A1B2B6F5
#=GS A0A1B2B6F5/664-715  OS Bacillus subtilis subsp. subtilis
#=GS A0A1B2B6F5/664-715  DE AraC family transcriptional regulator
#=GS A0A1B2B6F5/664-715  DR GENE3D; 5102f09b59d3964b5ed471caa5081d7d/664-715; 
#=GS A0A1B2B6F5/664-715  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS L8ARX9/664-715      AC L8ARX9
#=GS L8ARX9/664-715      OS Bacillus subtilis BEST7613
#=GS L8ARX9/664-715      DE AraC family transcriptional regulator
#=GS L8ARX9/664-715      DR GENE3D; 5102f09b59d3964b5ed471caa5081d7d/664-715; 
#=GS L8ARX9/664-715      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A0Q6H4E4/658-709  AC A0A0Q6H4E4
#=GS A0A0Q6H4E4/658-709  OS Bacillus sp. Leaf49
#=GS A0A0Q6H4E4/658-709  DE AraC family transcriptional regulator
#=GS A0A0Q6H4E4/658-709  DR GENE3D; 79b7aa1e3e1af24752f79c990ebd70f9/658-709; 
#=GS A0A0Q6H4E4/658-709  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. Leaf49; 
#=GS A0A0X9I3M9/658-709  AC A0A0X9I3M9
#=GS A0A0X9I3M9/658-709  OS Streptococcus pneumoniae
#=GS A0A0X9I3M9/658-709  DE Two-component response regulator
#=GS A0A0X9I3M9/658-709  DR GENE3D; 79b7aa1e3e1af24752f79c990ebd70f9/658-709; 
#=GS A0A0X9I3M9/658-709  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A1L5SG77/658-709  AC A0A1L5SG77
#=GS A0A1L5SG77/658-709  OS Bacillus pumilus
#=GS A0A1L5SG77/658-709  DE AraC family transcriptional regulator
#=GS A0A1L5SG77/658-709  DR GENE3D; 79b7aa1e3e1af24752f79c990ebd70f9/658-709; 
#=GS A0A1L5SG77/658-709  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS A0A1K2CZE2/658-709  AC A0A1K2CZE2
#=GS A0A1K2CZE2/658-709  OS Bacillus sp. ru9509.4
#=GS A0A1K2CZE2/658-709  DE Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains
#=GS A0A1K2CZE2/658-709  DR GENE3D; 79b7aa1e3e1af24752f79c990ebd70f9/658-709; 
#=GS A0A1K2CZE2/658-709  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. ru9509.4; 
#=GS A0A150KWK3/659-710  AC A0A150KWK3
#=GS A0A150KWK3/659-710  OS Bacillus vallismortis
#=GS A0A150KWK3/659-710  DE Uncharacterized protein
#=GS A0A150KWK3/659-710  DR GENE3D; 7ad62877f1532effc392d0c41c3a966c/659-710; 
#=GS A0A150KWK3/659-710  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus vallismortis; 
#=GS D4G093/289-341      AC D4G093
#=GS D4G093/289-341      OS Bacillus subtilis subsp. natto BEST195
#=GS D4G093/289-341      DE Uncharacterized protein
#=GS D4G093/289-341      DR GENE3D; d81ed07faf41973f1c461110c7946ee4/289-341; 
#=GS D4G093/289-341      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. natto; 
#=GS A8FGF2/658-709      AC A8FGF2
#=GS A8FGF2/658-709      OS Bacillus pumilus SAFR-032
#=GS A8FGF2/658-709      DE AraC family transcriptional regulator
#=GS A8FGF2/658-709      DR GENE3D; d87599d4c097f878c231e58d6d26ae15/658-709; 
#=GS A8FGF2/658-709      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS A0A0E2EGZ0/170-222  AC A0A0E2EGZ0
#=GS A0A0E2EGZ0/170-222  OS Streptococcus mutans 2ST1
#=GS A0A0E2EGZ0/170-222  DE Putative MSM operon regulatory protein
#=GS A0A0E2EGZ0/170-222  DR GENE3D; 21b0d97947ce4efca8d731c2fbf87b47/170-222; 
#=GS A0A0E2EGZ0/170-222  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mutans; 
#=GS A0A0E2F090/170-222  AC A0A0E2F090
#=GS A0A0E2F090/170-222  OS Streptococcus mutans SM6
#=GS A0A0E2F090/170-222  DE Putative MSM operon regulatory protein
#=GS A0A0E2F090/170-222  DR GENE3D; 21b0d97947ce4efca8d731c2fbf87b47/170-222; 
#=GS A0A0E2F090/170-222  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mutans; 
#=GS Q00753/170-222      AC Q00753
#=GS Q00753/170-222      OS Streptococcus mutans UA159
#=GS Q00753/170-222      DE Msm operon regulatory protein
#=GS Q00753/170-222      DR GENE3D; 21b0d97947ce4efca8d731c2fbf87b47/170-222; 
#=GS Q00753/170-222      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mutans; 
#=GF TC 107.3 3.9E-35
#=GF SQ 16
A0A0T8PIK9/660-711          QYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEY-
O32071/664-715              QYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEY-
A0A080UPA0/136-187          QYKNISEKIIHIIHQEFDSELTLDEIARRLHYNPNYLSSIFRKEMNISFSEY-
O30502/136-187              QYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEY-
A0A1B2B6F5/664-715          QYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEY-
L8ARX9/664-715              QYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEY-
A0A0Q6H4E4/658-709          QYKNISEKIIHIIHQEFDSDLTLDEIATRLHYNPNYLSSIFRKEMDISFSEY-
A0A0X9I3M9/658-709          QYKNISEKIIHIIHQEFDSDLTLDEIATRLHYNPNYLSSIFRKEMDISFSEY-
A0A1L5SG77/658-709          QYKNISEKIIHIIHQEFDSDLTLDEIATRLHYNPNYLSSIFRKEMDISFSEY-
A0A1K2CZE2/658-709          QYKNISEKIIHIIHQEFDSDLTLDEIATRLHYNPNYLSSIFRKEMDISFSEY-
A0A150KWK3/659-710          QYKNISEKIIHIIHQEFDSELTLDEIARRLHYNPNYLSSIFRKEMNISFSEY-
D4G093/289-341              QYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEYV
A8FGF2/658-709              QYKNISEKIIHIIHQEFDSDLTLDEIATRLHYNPNYLSSIFRKEMDISFSEY-
A0A0E2EGZ0/170-222          STKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYI
A0A0E2F090/170-222          STKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYI
Q00753/170-222              STKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYI
#=GC scorecons              54955555746999467594956679957965656995599795556955991
#=GC scorecons_70           __*_____*__***_**_*_*_*****_**_____**__****___**__**_
#=GC scorecons_80           __*________***__*_*_*____**__*_____**__****____*__**_
#=GC scorecons_90           __*________***____*_*____**__*_____**__**_*____*__**_
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