# STOCKHOLM 1.0 #=GF ID 1.10.10.60/FF/124155 #=GF DE Nif-specific regulatory protein #=GF AC 1.10.10.60/FF/124155 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 61.626 #=GS Q1M7V8/465-518 AC Q1M7V8 #=GS Q1M7V8/465-518 OS Rhizobium leguminosarum bv. viciae 3841 #=GS Q1M7V8/465-518 DE NifA transcriptional regulator #=GS Q1M7V8/465-518 DR GENE3D; 199e45f406570d132df0be481ebca164/465-518; #=GS Q1M7V8/465-518 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium leguminosarum; #=GS P03028/485-541 AC P03028 #=GS P03028/485-541 OS Sinorhizobium meliloti 1021 #=GS P03028/485-541 DE Nif-specific regulatory protein #=GS P03028/485-541 DR GENE3D; 7b1425cbf3410be9b41787ec901afc8d/485-541; #=GS P03028/485-541 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium; Sinorhizobium meliloti; #=GS P54931/534-584 AC P54931 #=GS P54931/534-584 OS Rhizobium etli CFN 42 #=GS P54931/534-584 DE Nif-specific regulatory protein #=GS P54931/534-584 DR GENE3D; 116a0de430406a24faade23de805486f/534-584; #=GS P54931/534-584 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium etli; #=GS A0A192M5H8/534-584 AC A0A192M5H8 #=GS A0A192M5H8/534-584 OS Rhizobium sp. N113 #=GS A0A192M5H8/534-584 DE Nif-specific regulatory protein NifA #=GS A0A192M5H8/534-584 DR GENE3D; 116a0de430406a24faade23de805486f/534-584; #=GS A0A192M5H8/534-584 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium sp. N113; #=GS A0A192TKR7/534-584 AC A0A192TKR7 #=GS A0A192TKR7/534-584 OS Rhizobium phaseoli #=GS A0A192TKR7/534-584 DE Nif-specific regulatory protein NifA #=GS A0A192TKR7/534-584 DR GENE3D; 116a0de430406a24faade23de805486f/534-584; #=GS A0A192TKR7/534-584 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium phaseoli; #=GS Q7ATJ5/462-518 AC Q7ATJ5 #=GS Q7ATJ5/462-518 OS Rhizobium leguminosarum bv. viciae #=GS Q7ATJ5/462-518 DE Transcriptional activator of nitrogen fixation genes #=GS Q7ATJ5/462-518 DR GENE3D; 19f8b42a2dab17bfe463e186f2eadcbe/462-518; #=GS Q7ATJ5/462-518 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium leguminosarum; #=GS P09828/462-518 AC P09828 #=GS P09828/462-518 OS Rhizobium leguminosarum #=GS P09828/462-518 DE Nif-specific regulatory protein #=GS P09828/462-518 DR GENE3D; 19f8b42a2dab17bfe463e186f2eadcbe/462-518; #=GS P09828/462-518 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium leguminosarum; #=GS S5S636/535-585 AC S5S636 #=GS S5S636/535-585 OS Rhizobium etli bv. mimosae str. Mim1 #=GS S5S636/535-585 DE Nif-specific regulatory protein NifA 1 #=GS S5S636/535-585 DR GENE3D; 26c6991a414cfd564411ce1fc6bd22d9/535-585; #=GS S5S636/535-585 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium etli; #=GS S3H4N9/544-590 AC S3H4N9 #=GS S3H4N9/544-590 OS Rhizobium grahamii CCGE 502 #=GS S3H4N9/544-590 DE Nif-specific regulatory protein, NifA #=GS S3H4N9/544-590 DR GENE3D; 4233441c1d26bfdead8ada817dd5ed26/544-590; #=GS S3H4N9/544-590 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium grahamii; #=GS A0A1I4EJ24/543-589 AC A0A1I4EJ24 #=GS A0A1I4EJ24/543-589 OS Mesorhizobium albiziae #=GS A0A1I4EJ24/543-589 DE Nif-specific regulatory protein #=GS A0A1I4EJ24/543-589 DR GENE3D; 429f6c6ef1b51c6b075d26b7da492b1c/543-589; #=GS A0A1I4EJ24/543-589 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium; Mesorhizobium albiziae; #=GS M5FL33/538-586 AC M5FL33 #=GS M5FL33/538-586 OS Mesorhizobium sp. STM 4661 #=GS M5FL33/538-586 DE Nif-specific regulatory protein #=GS M5FL33/538-586 DR GENE3D; 5a8df41185a62037fa4689a676ea9789/538-586; #=GS M5FL33/538-586 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium; Mesorhizobium sp. STM 4661; #=GS K0VPH4/425-475 AC K0VPH4 #=GS K0VPH4/425-475 OS Rhizobium sp. Pop5 #=GS K0VPH4/425-475 DE Nitrogen fixation transcriptional regulator protein, NifA #=GS K0VPH4/425-475 DR GENE3D; 65ea4d27185f70b6b41f4d07ae43a5cd/425-475; #=GS K0VPH4/425-475 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium sp. Pop5; #=GS I4Z3C1/518-564 AC I4Z3C1 #=GS I4Z3C1/518-564 OS Microvirga lotononidis #=GS I4Z3C1/518-564 DE Nif-specific regulatory protein #=GS I4Z3C1/518-564 DR GENE3D; 78884779813857a2ee4c384a6254672b/518-564; #=GS I4Z3C1/518-564 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga; Microvirga lotononidis; #=GS M4MNW2/485-541 AC M4MNW2 #=GS M4MNW2/485-541 OS Sinorhizobium meliloti 2011 #=GS M4MNW2/485-541 DE NifA transcriptional activator #=GS M4MNW2/485-541 DR GENE3D; 7b1425cbf3410be9b41787ec901afc8d/485-541; #=GS M4MNW2/485-541 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium; Sinorhizobium meliloti; #=GS Q98AT8/532-583 AC Q98AT8 #=GS Q98AT8/532-583 OS Mesorhizobium loti MAFF303099 #=GS Q98AT8/532-583 DE Nif-specific regulatory protein NifA #=GS Q98AT8/532-583 DR GENE3D; 8cfb134cc7dd1723b445b95f7a12e501/532-583; #=GS Q98AT8/532-583 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium; Mesorhizobium loti; #=GS A0A154ICA3/465-518 AC A0A154ICA3 #=GS A0A154ICA3/465-518 OS Rhizobium leguminosarum #=GS A0A154ICA3/465-518 DE Nif-specific transcriptional activator NifA #=GS A0A154ICA3/465-518 DR GENE3D; 8ea85e6390dc7e8ee8c0234e8d3dbe33/465-518; #=GS A0A154ICA3/465-518 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium leguminosarum; #=GS A0A1E3VHN5/495-541 AC A0A1E3VHN5 #=GS A0A1E3VHN5/495-541 OS Ensifer sp. YIC4027 #=GS A0A1E3VHN5/495-541 DE Nif-specific transcriptional activator NifA #=GS A0A1E3VHN5/495-541 DR GENE3D; a249e87aa658933cf37c6b7538ce7828/495-541; #=GS A0A1E3VHN5/495-541 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Ensifer; Ensifer sp. YIC4027; #=GS Q53206/549-594 AC Q53206 #=GS Q53206/549-594 OS Sinorhizobium fredii NGR234 #=GS Q53206/549-594 DE Nif-specific regulatory protein #=GS Q53206/549-594 DR GENE3D; b7f1437c0219f231d58e672e1a83bbc8/549-594; #=GS Q53206/549-594 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium; Sinorhizobium fredii; #=GS U4Q446/517-564 AC U4Q446 #=GS U4Q446/517-564 OS Rhizobium sp. IRBG74 #=GS U4Q446/517-564 DE Mo/Fe nitrogenase specific transcriptional regulator, NifA #=GS U4Q446/517-564 DR GENE3D; bba86eaba3801e76a2ad726e10d43a61/517-564; #=GS U4Q446/517-564 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium sp. IRBG74; #=GS A0A0B4X9H2/534-581 AC A0A0B4X9H2 #=GS A0A0B4X9H2/534-581 OS Rhizobium gallicum bv. gallicum R602 #=GS A0A0B4X9H2/534-581 DE Nif-specific regulatory protein NifA #=GS A0A0B4X9H2/534-581 DR GENE3D; ff939b19ef09ef75edf436ec3c585401/534-581; #=GS A0A0B4X9H2/534-581 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium; Rhizobium gallicum; #=GF TC 110.0 2.6E-35 #=GF SQ 20 Q1M7V8/465-518 ---ATATMEAPGLTERDRLINAMVKAGWVQAKAARILGKTPRQVGYALRRFRIDVKK- P03028/485-541 -KEPGSAGVASNLIERDRLISALEEAGWNQAKAARILEKTPRQVGYALRRHGVDVRKL P54931/534-584 -------AMESRLTQRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL A0A192M5H8/534-584 -------AMESRLTQRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL A0A192TKR7/534-584 -------AMESRLTQRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL Q7ATJ5/462-518 PSGAAATIEAAGLTERDRLIKAMERAGWVQAKAARILGKTPRQVGYALRRHRIDVKK- P09828/462-518 PSGAAATIEAAGLTERDRLIKAMERAGWVQAKAARILGKTPRQVGYALRRHRIDVKK- S5S636/535-585 -------AMESRLTQRDRLIDAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL S3H4N9/544-590 -----------RLTERDRLINAMERAGWVQAKAARLLGITPRQVGYALRRHRVDVKKF A0A1I4EJ24/543-589 -----------RLTERDRLIDAMEKAGWVQAKAARILGLTPRQVGYALRRHRIEVKKF M5FL33/538-586 ---------NPRLTERDRLIDAMEKAGWVQAKAARVLGLTPRQVGYALRRHRIGVKKF K0VPH4/425-475 -------AMESRLTQRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL I4Z3C1/518-564 -----------RLADRDRLIDAMEKAGWVQAKAARILGLTPRQVGYALRRYRIEVKKF M4MNW2/485-541 -KEPGSAGVASNLIERDRLISALEEAGWNQAKAARILEKTPRQVGYALRRHGVDVRKL Q98AT8/532-583 ------PAINQRLTERDRLIDAMEKAGWVQAKAARFLGLTPRQVGYALRRHHIEVKKF A0A154ICA3/465-518 ---ATATIEAPGLTERDRLINAMEKAGWVQAKAARILGKTPRQVGYALRRFGIDVVK- A0A1E3VHN5/495-541 -----------HLTDRELLISAMEKAGWVQAKAARILGLTPRQVGYALRRHRIQVKKI Q53206/549-594 ------------LSDRELLISAMEKAGWVQAKAARILGLTPRQVGYALRRHHIQVKKI U4Q446/517-564 ----------PHLTDRELLISAMEKAGWVQAKAARILGLTPRQVGYALRRHRIQVKKI A0A0B4X9H2/534-581 ----------SRLTERDRLIDAMEKAGWVQAKAARILGLTPRQVGYALRRHRIEVKKL #=GC scorecons 0000000112249669869949786999799999979749999999999776759793 #=GC scorecons_70 ____________********_*****************_************_*_***_ #=GC scorecons_80 ____________*__**_**_***_***_*********_************_*_*_*_ #=GC scorecons_90 ____________*__*__**_*_*_***_******_*__**********_____*_*_ //