# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/124136
#=GF DE Transcriptional regulator BenR
#=GF AC 1.10.10.60/FF/124136
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 48.499
#=GS Q05335/212-317      AC Q05335
#=GS Q05335/212-317      OS Pseudomonas putida
#=GS Q05335/212-317      DE XylDLEGF operon transcriptional activator 3
#=GS Q05335/212-317      DR GENE3D; 1c89268d375ce26e6b58093890747bb2/212-317; 
#=GS Q05335/212-317      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS F1LIW1/212-317      AC F1LIW1
#=GS F1LIW1/212-317      OS Pseudomonas putida
#=GS F1LIW1/212-317      DE Transcriptional activator of xyl-meta-cleavage pathway operon
#=GS F1LIW1/212-317      DR GENE3D; 1c89268d375ce26e6b58093890747bb2/212-317; 
#=GS F1LIW1/212-317      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A0T6HVW6/213-318  AC A0A0T6HVW6
#=GS A0A0T6HVW6/213-318  OS Pseudomonas aeruginosa
#=GS A0A0T6HVW6/213-318  DE AraC family transcriptional regulator
#=GS A0A0T6HVW6/213-318  DR GENE3D; 906c30c452ac978d331d8564a2dbe8ea/213-318; 
#=GS A0A0T6HVW6/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A6V4U3/213-318      AC A6V4U3
#=GS A6V4U3/213-318      OS Pseudomonas aeruginosa PA7
#=GS A6V4U3/213-318      DE BenR
#=GS A6V4U3/213-318      DR GENE3D; 906c30c452ac978d331d8564a2dbe8ea/213-318; 
#=GS A6V4U3/213-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0F6UJV0/213-318  AC A0A0F6UJV0
#=GS A0A0F6UJV0/213-318  OS Pseudomonas aeruginosa
#=GS A0A0F6UJV0/213-318  DE L-rhamnose operon regulatory protein RhaS
#=GS A0A0F6UJV0/213-318  DR GENE3D; a02b554051cd8cf0320477d27dc18478/213-318; 
#=GS A0A0F6UJV0/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q04710/212-318      AC Q04710
#=GS Q04710/212-318      OS Pseudomonas putida
#=GS Q04710/212-318      DE XylDLEGF operon transcriptional activator 1
#=GS Q04710/212-318      DR GENE3D; e8b9a7cf73b430bac3688dfbe705d433/212-318; 
#=GS Q04710/212-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS F1LIV1/212-318      AC F1LIV1
#=GS F1LIV1/212-318      OS Pseudomonas putida
#=GS F1LIV1/212-318      DE Transcriptional activator of xyl-meta-cleavage pathway operon
#=GS F1LIV1/212-318      DR GENE3D; e8b9a7cf73b430bac3688dfbe705d433/212-318; 
#=GS F1LIV1/212-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A0S2UP68/212-318  AC A0A0S2UP68
#=GS A0A0S2UP68/212-318  OS Pseudomonas stutzeri
#=GS A0A0S2UP68/212-318  DE Transcriptional regulator XylS
#=GS A0A0S2UP68/212-318  DR GENE3D; e8b9a7cf73b430bac3688dfbe705d433/212-318; 
#=GS A0A0S2UP68/212-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas stutzeri group; Pseudomonas stutzeri subgroup; Pseudomonas stutzeri; 
#=GS N9W0R5/212-318      AC N9W0R5
#=GS N9W0R5/212-318      OS Pseudomonas putida TRO1
#=GS N9W0R5/212-318      DE Transcriptional activator of xyl-meta-cleavage pathway operon
#=GS N9W0R5/212-318      DR GENE3D; e8b9a7cf73b430bac3688dfbe705d433/212-318; 
#=GS N9W0R5/212-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A1C7BW50/213-318  AC A0A1C7BW50
#=GS A0A1C7BW50/213-318  OS Pseudomonas aeruginosa BL04
#=GS A0A1C7BW50/213-318  DE Transcriptional regulator XylS
#=GS A0A1C7BW50/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A1C7BW50/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1F0J3I2/213-318  AC A0A1F0J3I2
#=GS A0A1F0J3I2/213-318  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0J3I2/213-318  DE AraC family transcriptional regulator
#=GS A0A1F0J3I2/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A1F0J3I2/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GS A0A080VS59/213-318  AC A0A080VS59
#=GS A0A080VS59/213-318  OS Pseudomonas aeruginosa
#=GS A0A080VS59/213-318  DE HTH-type transcriptional activator RhaS
#=GS A0A080VS59/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A080VS59/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q79T12/213-318      AC Q79T12
#=GS Q79T12/213-318      OS Pseudomonas putida
#=GS Q79T12/213-318      DE Transcriptional regulatory protein BenM
#=GS Q79T12/213-318      DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS Q79T12/213-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A1D5BZJ8/213-318  AC A0A1D5BZJ8
#=GS A0A1D5BZJ8/213-318  OS Pseudomonas sp. P179
#=GS A0A1D5BZJ8/213-318  DE Uncharacterized protein
#=GS A0A1D5BZJ8/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A1D5BZJ8/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. P179; 
#=GS Q9I0W3/213-318      AC Q9I0W3
#=GS Q9I0W3/213-318      OS Pseudomonas aeruginosa PAO1
#=GS Q9I0W3/213-318      DE Transcriptional regulator XylS
#=GS Q9I0W3/213-318      DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS Q9I0W3/213-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0E1ASA2/213-318  AC A0A0E1ASA2
#=GS A0A0E1ASA2/213-318  OS Pseudomonas aeruginosa MTB-1
#=GS A0A0E1ASA2/213-318  DE AraC family transcriptional regulator
#=GS A0A0E1ASA2/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A0E1ASA2/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0N7LJ69/213-318  AC A0A0N7LJ69
#=GS A0A0N7LJ69/213-318  OS Pseudomonas aeruginosa DK1
#=GS A0A0N7LJ69/213-318  DE HTH-type transcriptional activator RhaS
#=GS A0A0N7LJ69/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A0N7LJ69/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS V6AFB0/213-318      AC V6AFB0
#=GS V6AFB0/213-318      OS Pseudomonas aeruginosa MH27
#=GS V6AFB0/213-318      DE XylDLEGF operon transcriptional activator 3
#=GS V6AFB0/213-318      DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS V6AFB0/213-318      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1E9D3P4/213-318  AC A0A1E9D3P4
#=GS A0A1E9D3P4/213-318  OS Pseudomonas sp. HMSC066B11
#=GS A0A1E9D3P4/213-318  DE AraC family transcriptional regulator
#=GS A0A1E9D3P4/213-318  DR GENE3D; f4144e10be78808fc8eb80150a48c48f/213-318; 
#=GS A0A1E9D3P4/213-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC066B11; 
#=GF TC 0.0 0.0E+00
#=GF SQ 19
Q05335/212-317              SFERVVQFIEDNLKQSISLERLAELALMSPRSLYTLFEKHAGTTPKNYIRNRKLECIRARLSDPNANVRSVTEMALDYGFFHTGRFAENYRSTFGELPSDTLRRRK-
F1LIW1/212-317              SFERVVQFIEDNLKQSISLERLAELALMSPRSLYTLFEKHAGTTPKNYIRNRKLECIRARLSDPNANVRSVTEMALDYGFFHTGRFAENYRSTFGELPSDTLRRRK-
A0A0T6HVW6/213-318          VFARIDAYIRRHLQDDIEVAALAGQAHMSPRALYALFERQCGESPLQYIRRLRLERIRACLADPDCAVRNVTALALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A6V4U3/213-318              VFARIDAYIRRHLQDDIEVAALAGQAHMSPRALYALFERQCGESPLQYIRRLRLERIRACLADPDCAVRNVTALALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A0F6UJV0/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
Q04710/212-318              SFERVVQFIEENLKRNISLERLAELAMMSPRSLYNLFEKHAGTTPKNYIRNRKLESIRACLNDPSANVRSITEIALDYGFLHLGRFAENYRSAFGELPSDTLRQCKK
F1LIV1/212-318              SFERVVQFIEENLKRNISLERLAELAMMSPRSLYNLFEKHAGTTPKNYIRNRKLESIRACLNDPSANVRSITEIALDYGFLHLGRFAENYRSAFGELPSDTLRQCKK
A0A0S2UP68/212-318          SFERVVQFIEENLKRNISLERLAELAMMSPRSLYNLFEKHAGTTPKNYIRNRKLESIRACLNDPSANVRSITEIALDYGFLHLGRFAENYRSAFGELPSDTLRQCKK
N9W0R5/212-318              SFERVVQFIEENLKRNISLERLAELAMMSPRSLYNLFEKHAGTTPKNYIRNRKLESIRACLNDPSANVRSITEIALDYGFLHLGRFAENYRSAFGELPSDTLRQCKK
A0A1C7BW50/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A1F0J3I2/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A080VS59/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
Q79T12/213-318              VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A1D5BZJ8/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
Q9I0W3/213-318              VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A0E1ASA2/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A0N7LJ69/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
V6AFB0/213-318              VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
A0A1E9D3P4/213-318          VFARLDAYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDPGCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA-
#=GC scorecons              59596457955696459565599759499697995999764956955999547994999794994559965976999799497999995995499999979996550
#=GC scorecons_70           _*_*___**___**__*_*__***_*_**_****_*****_*__*__***__***_*****_**___**__**_******_*******_**__***********___
#=GC scorecons_80           _*_*___**___*___*____***_*_**_****_***___*__*__***___**_***_*_**___**__**_******_*_*****_**__******_***____
#=GC scorecons_90           _*_*____*___*___*____**__*_**_*_**_***___*__*__***___**_***_*_**___**__*__***_**_*_*****_**__******_***____
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