# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/123008
#=GF DE DnaJ homolog subfamily C member 1
#=GF AC 1.10.10.60/FF/123008
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 42.828
#=GS Q61712/493-541      AC Q61712
#=GS Q61712/493-541      OS Mus musculus
#=GS Q61712/493-541      DE DnaJ homolog subfamily C member 1
#=GS Q61712/493-541      DR GENE3D; 7ff68cac7b373c3063c07bc7e84adb03/493-541; 
#=GS Q61712/493-541      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q61712/493-541      DR GO; GO:0005515; GO:0005634; GO:0005783; GO:0005788; GO:0005886; GO:0006417; GO:0006457; GO:0016020; GO:0016021; GO:0043022; GO:0050708; GO:0051087; 
#=GS Q96KC8/489-553      AC Q96KC8
#=GS Q96KC8/489-553      OS Homo sapiens
#=GS Q96KC8/489-553      DE DnaJ homolog subfamily C member 1
#=GS Q96KC8/489-553      DR GENE3D; d1081c5101119e45cf6302e6d7bf4a6d/489-553; 
#=GS Q96KC8/489-553      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q96KC8/489-553      DR GO; GO:0001671; GO:0005515; GO:0005783; GO:0016020; GO:0045861; GO:0050708; 
#=GS A4VCI1/158-222      AC A4VCI1
#=GS A4VCI1/158-222      OS Homo sapiens
#=GS A4VCI1/158-222      DE DNAJC1 protein
#=GS A4VCI1/158-222      DR GENE3D; 614e39b1a0238143b9f3746cb400a6fa/158-222; 
#=GS A4VCI1/158-222      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS F6ZL86/298-346      AC F6ZL86
#=GS F6ZL86/298-346      OS Mus musculus
#=GS F6ZL86/298-346      DE DnaJ homolog subfamily C member 1
#=GS F6ZL86/298-346      DR GENE3D; 45e31051c84762bbba88a763756716f5/298-346; 
#=GS F6ZL86/298-346      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS F7GZD6/492-555      AC F7GZD6
#=GS F7GZD6/492-555      OS Macaca mulatta
#=GS F7GZD6/492-555      DE DnaJ homolog subfamily C member 1
#=GS F7GZD6/492-555      DR GENE3D; 43a09acf9c2c0b1062552239e36e775f/492-555; 
#=GS F7GZD6/492-555      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS L5L018/483-547      AC L5L018
#=GS L5L018/483-547      OS Pteropus alecto
#=GS L5L018/483-547      DE DnaJ like protein subfamily C member 1
#=GS L5L018/483-547      DR GENE3D; 24cf50730c77ec32f86efda5ee3af615/483-547; 
#=GS L5L018/483-547      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Megachiroptera; Pteropodidae; Pteropodinae; Pteropus; Pteropus alecto; 
#=GS I3M060/481-544      AC I3M060
#=GS I3M060/481-544      OS Ictidomys tridecemlineatus
#=GS I3M060/481-544      DE Uncharacterized protein
#=GS I3M060/481-544      DR GENE3D; 5adb8487dc15791079133ab91582eccb/481-544; 
#=GS I3M060/481-544      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys; Ictidomys tridecemlineatus; 
#=GS G3R8B5/471-535      AC G3R8B5
#=GS G3R8B5/471-535      OS Gorilla gorilla gorilla
#=GS G3R8B5/471-535      DE Uncharacterized protein
#=GS G3R8B5/471-535      DR GENE3D; 2da807a57f5b5362bd558d7718dcd750/471-535; 
#=GS G3R8B5/471-535      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A096P3P9/491-553  AC A0A096P3P9
#=GS A0A096P3P9/491-553  OS Papio anubis
#=GS A0A096P3P9/491-553  DE Uncharacterized protein
#=GS A0A096P3P9/491-553  DR GENE3D; 6774a1f4befd1e1f4a732a5f9fc44c5e/491-553; 
#=GS A0A096P3P9/491-553  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS H2Q1Q2/492-556      AC H2Q1Q2
#=GS H2Q1Q2/492-556      OS Pan troglodytes
#=GS H2Q1Q2/492-556      DE Uncharacterized protein
#=GS H2Q1Q2/492-556      DR GENE3D; d794a019097750187c3c4dd593a5bcba/492-556; 
#=GS H2Q1Q2/492-556      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS H2N9Y1/493-558      AC H2N9Y1
#=GS H2N9Y1/493-558      OS Pongo abelii
#=GS H2N9Y1/493-558      DE Uncharacterized protein
#=GS H2N9Y1/493-558      DR GENE3D; eb519832a748a080355e45043eeddf9f/493-558; 
#=GS H2N9Y1/493-558      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS F1MJX8/478-542      AC F1MJX8
#=GS F1MJX8/478-542      OS Bos taurus
#=GS F1MJX8/478-542      DE Uncharacterized protein
#=GS F1MJX8/478-542      DR GENE3D; bf3a50ff67bc9ab06d12d38914608317/478-542; 
#=GS F1MJX8/478-542      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS F7C3D3/344-411      AC F7C3D3
#=GS F7C3D3/344-411      OS Equus caballus
#=GS F7C3D3/344-411      DE Uncharacterized protein
#=GS F7C3D3/344-411      DR GENE3D; 3b2c61a8883fb816b2abc423b00eaf02/344-411; 
#=GS F7C3D3/344-411      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS M3WD12/492-555      AC M3WD12
#=GS M3WD12/492-555      OS Felis catus
#=GS M3WD12/492-555      DE Uncharacterized protein
#=GS M3WD12/492-555      DR GENE3D; 22ed45cb01a7b8ba27221ca8f8dcd97e/492-555; 
#=GS M3WD12/492-555      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS F1MK90/480-544      AC F1MK90
#=GS F1MK90/480-544      OS Bos taurus
#=GS F1MK90/480-544      DE Uncharacterized protein
#=GS F1MK90/480-544      DR GENE3D; df486369411725681fb7622ac2c4418f/480-544; 
#=GS F1MK90/480-544      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS G1LHW7/407-470      AC G1LHW7
#=GS G1LHW7/407-470      OS Ailuropoda melanoleuca
#=GS G1LHW7/407-470      DE Uncharacterized protein
#=GS G1LHW7/407-470      DR GENE3D; 2cc608dee7a56428e2da9ad1681cd626/407-470; 
#=GS G1LHW7/407-470      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda; Ailuropoda melanoleuca; 
#=GS F7HXA5/491-554      AC F7HXA5
#=GS F7HXA5/491-554      OS Callithrix jacchus
#=GS F7HXA5/491-554      DE DnaJ homolog subfamily C member 1
#=GS F7HXA5/491-554      DR GENE3D; a4ae79aacc8978ddb5ac773af82a3741/491-554; 
#=GS F7HXA5/491-554      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS G1LHW1/473-536      AC G1LHW1
#=GS G1LHW1/473-536      OS Ailuropoda melanoleuca
#=GS G1LHW1/473-536      DE Uncharacterized protein
#=GS G1LHW1/473-536      DR GENE3D; a1fa6f3ce117f4d166a3790f3b78ffe5/473-536; 
#=GS G1LHW1/473-536      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda; Ailuropoda melanoleuca; 
#=GS M3YKU7/491-554      AC M3YKU7
#=GS M3YKU7/491-554      OS Mustela putorius furo
#=GS M3YKU7/491-554      DE Uncharacterized protein
#=GS M3YKU7/491-554      DR GENE3D; c17dfffd8a95828639c88fbb78e4199f/491-554; 
#=GS M3YKU7/491-554      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Mustelinae; Mustela; Mustela putorius; Mustela putorius furo; 
#=GS G1PR39/422-485      AC G1PR39
#=GS G1PR39/422-485      OS Myotis lucifugus
#=GS G1PR39/422-485      DE Uncharacterized protein
#=GS G1PR39/422-485      DR GENE3D; 775119c606c9e33f63ec8d072dfde3a7/422-485; 
#=GS G1PR39/422-485      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis lucifugus; 
#=GS F1PMR9/497-560      AC F1PMR9
#=GS F1PMR9/497-560      OS Canis lupus familiaris
#=GS F1PMR9/497-560      DE DnaJ homolog subfamily C member 1
#=GS F1PMR9/497-560      DR GENE3D; 5507c1a7d09dc0f5aa8f6509b96040db/497-560; 
#=GS F1PMR9/497-560      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS A0A0D9RJ79/491-554  AC A0A0D9RJ79
#=GS A0A0D9RJ79/491-554  OS Chlorocebus sabaeus
#=GS A0A0D9RJ79/491-554  DE Uncharacterized protein
#=GS A0A0D9RJ79/491-554  DR GENE3D; 3ba69bca4b8dbaf656c1b63e6a987ea4/491-554; 
#=GS A0A0D9RJ79/491-554  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS F7I4B9/154-217      AC F7I4B9
#=GS F7I4B9/154-217      OS Callithrix jacchus
#=GS F7I4B9/154-217      DE Uncharacterized protein
#=GS F7I4B9/154-217      DR GENE3D; 51d9731453f2c013fc79fed748714ad0/154-217; 
#=GS F7I4B9/154-217      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS G1RQR4/461-524      AC G1RQR4
#=GS G1RQR4/461-524      OS Nomascus leucogenys
#=GS G1RQR4/461-524      DE Uncharacterized protein
#=GS G1RQR4/461-524      DR GENE3D; 83d694fb66bda28415195bb294315ab4/461-524; 
#=GS G1RQR4/461-524      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS L5M5X7/448-511      AC L5M5X7
#=GS L5M5X7/448-511      OS Myotis davidii
#=GS L5M5X7/448-511      DE DnaJ like protein subfamily C member 1
#=GS L5M5X7/448-511      DR GENE3D; df6fc5f920da843cb039b712bd846dfb/448-511; 
#=GS L5M5X7/448-511      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis davidii; 
#=GS A0A061IAA5/413-461  AC A0A061IAA5
#=GS A0A061IAA5/413-461  OS Cricetulus griseus
#=GS A0A061IAA5/413-461  DE Putative dnaJ subfamily C member 1
#=GS A0A061IAA5/413-461  DR GENE3D; 827538572463afdb01f7807b28ed7d0b/413-461; 
#=GS A0A061IAA5/413-461  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GS I3L6W6/478-541      AC I3L6W6
#=GS I3L6W6/478-541      OS Sus scrofa
#=GS I3L6W6/478-541      DE Uncharacterized protein
#=GS I3L6W6/478-541      DR GENE3D; 8b1072898f9872b1a52924d0c09831b6/478-541; 
#=GS I3L6W6/478-541      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; 
#=GS G3T9T2/468-531      AC G3T9T2
#=GS G3T9T2/468-531      OS Loxodonta africana
#=GS G3T9T2/468-531      DE Uncharacterized protein
#=GS G3T9T2/468-531      DR GENE3D; cf24752cdf60b9c181c6e62a54ec87d7/468-531; 
#=GS G3T9T2/468-531      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Afrotheria; Proboscidea; Elephantidae; Loxodonta; Loxodonta africana; 
#=GF TC 121.9 1.2E-38
#=GF SQ 28
Q61712/493-541              --------EAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLV-----------
Q96KC8/489-553              --RARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
A4VCI1/158-222              --RARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
F6ZL86/298-346              --------EAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLV-----------
F7GZD6/492-555              ---ARAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
L5L018/483-547              --RGHTAEEPWTQTQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
I3M060/481-544              ---THAAEEPWTQNQQKLLEMALQQYPKGASDRWDKIAKCVPAKSKEDCIARYKLLVELVQKKKQAK-
G3R8B5/471-535              --RARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
A0A096P3P9/491-553          ---ARAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKK-AK-
H2Q1Q2/492-556              --RARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
H2N9Y1/493-558              --RARAAEGPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKNKEDCIARYKLLVELVQKKKQAKS
F1MJX8/478-542              ---PRASEEPWTQNQQKLLELALQQYPRGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQARS
F7C3D3/344-411              RERTRAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKEAKS
M3WD12/492-555              ---ARAAEEPWTQSQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
F1MK90/480-544              ---PRASEEPWTQNQQKLLELALQQYPRGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQARS
G1LHW7/407-470              ---TRAAEEPWTQSQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
F7HXA5/491-554              ---ARAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
G1LHW1/473-536              ---TRAAEEPWTQSQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
M3YKU7/491-554              ---TRAAEEPWTQSQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
G1PR39/422-485              ---SRTAEEPWTQNQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
F1PMR9/497-560              ---TRAAEEPWTQSQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
A0A0D9RJ79/491-554          ---ARAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
F7I4B9/154-217              ---ARAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
G1RQR4/461-524              ---ARAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAK-
L5M5X7/448-511              ---SRTAEEPWTQNQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
A0A061IAA5/413-461          --------EAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLV-----------
I3L6W6/478-541              ---TRATEEPWTQNQQKLLELALQQYPKGSSERWDKIAKCVPSKTKEDCIARYKLLVELVQKKKQAK-
G3T9T2/468-531              ---TRAAEEPWTQNQQKLLELALQQYPKGSSDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQAK-
#=GC scorecons              00023334869996999999899999979698999999799989899999999999944444443440
#=GC scorecons_70           ________*****_*******************************************___________
#=GC scorecons_80           ________*_***_***************_***************************___________
#=GC scorecons_90           ________*_***_*************_*_********_******************___________
//