# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/100988
#=GF DE Sigma L-dependent transcriptional regulator YqiR
#=GF AC 1.10.10.60/FF/100988
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 15.692
#=GS G4EU16/634-688      AC G4EU16
#=GS G4EU16/634-688      OS Bacillus subtilis subsp. subtilis str. SC-8
#=GS G4EU16/634-688      DE Transcriptional regulator
#=GS G4EU16/634-688      DR GENE3D; 4a56e027763b527a3af02034f0cb6d73/634-688; 
#=GS G4EU16/634-688      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS G4EU16/634-688      DR EC; 2.7.13.3; 
#=GS E1UKF5/632-685      AC E1UKF5
#=GS E1UKF5/632-685      OS Bacillus amyloliquefaciens DSM 7
#=GS E1UKF5/632-685      DE Transcriptional regulator
#=GS E1UKF5/632-685      DR GENE3D; b8cfbfac031bd69efbb0c2e87827ed8d/632-685; 
#=GS E1UKF5/632-685      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group; Bacillus amyloliquefaciens; 
#=GS E1UKF5/632-685      DR EC; 2.7.13.3; 
#=GS A0A1A5V8U4/632-685  AC A0A1A5V8U4
#=GS A0A1A5V8U4/632-685  OS Bacillus amyloliquefaciens
#=GS A0A1A5V8U4/632-685  DE Histidine kinase
#=GS A0A1A5V8U4/632-685  DR GENE3D; b8cfbfac031bd69efbb0c2e87827ed8d/632-685; 
#=GS A0A1A5V8U4/632-685  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group; Bacillus amyloliquefaciens; 
#=GS A0A1A5V8U4/632-685  DR EC; 2.7.13.3; 
#=GS A0A172XKA3/632-685  AC A0A172XKA3
#=GS A0A172XKA3/632-685  OS Bacillus velezensis
#=GS A0A172XKA3/632-685  DE ATPase AAA
#=GS A0A172XKA3/632-685  DR GENE3D; fa18a992ffa5b04338cedc35f57810bf/632-685; 
#=GS A0A172XKA3/632-685  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group; Bacillus velezensis; 
#=GS A0A172XKA3/632-685  DR EC; 2.7.13.3; 
#=GS A0A1L6CED6/632-685  AC A0A1L6CED6
#=GS A0A1L6CED6/632-685  OS Bacillus amyloliquefaciens
#=GS A0A1L6CED6/632-685  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A1L6CED6/632-685  DR GENE3D; fa18a992ffa5b04338cedc35f57810bf/632-685; 
#=GS A0A1L6CED6/632-685  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group; Bacillus amyloliquefaciens; 
#=GS A0A1L6CED6/632-685  DR EC; 2.7.13.3; 
#=GS P54529/635-688      AC P54529
#=GS P54529/635-688      OS Bacillus subtilis subsp. subtilis str. 168
#=GS P54529/635-688      DE Putative sigma L-dependent transcriptional regulator YqiR
#=GS P54529/635-688      DR GENE3D; a563d2634e9c619348675bc27ba61c61/635-688; 
#=GS P54529/635-688      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A199WK86/635-688  AC A0A199WK86
#=GS A0A199WK86/635-688  OS Bacillus subtilis subsp. subtilis
#=GS A0A199WK86/635-688  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A199WK86/635-688  DR GENE3D; a563d2634e9c619348675bc27ba61c61/635-688; 
#=GS A0A199WK86/635-688  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A0A0YFC7/635-688  AC A0A0A0YFC7
#=GS A0A0A0YFC7/635-688  OS Bacillus subtilis
#=GS A0A0A0YFC7/635-688  DE Arginine utilization regulatory protein RocR
#=GS A0A0A0YFC7/635-688  DR GENE3D; a563d2634e9c619348675bc27ba61c61/635-688; 
#=GS A0A0A0YFC7/635-688  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A125UJZ2/635-688  AC A0A125UJZ2
#=GS A0A125UJZ2/635-688  OS Bacillus sp. LM 4-2
#=GS A0A125UJZ2/635-688  DE Transcriptional regulator
#=GS A0A125UJZ2/635-688  DR GENE3D; a563d2634e9c619348675bc27ba61c61/635-688; 
#=GS A0A125UJZ2/635-688  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. LM 4-2; 
#=GS L8AMX9/635-688      AC L8AMX9
#=GS L8AMX9/635-688      OS Bacillus subtilis BEST7613
#=GS L8AMX9/635-688      DE Transcriptional regulator
#=GS L8AMX9/635-688      DR GENE3D; a563d2634e9c619348675bc27ba61c61/635-688; 
#=GS L8AMX9/635-688      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A080UQI6/635-688  AC A0A080UQI6
#=GS A0A080UQI6/635-688  OS Bacillus subtilis subsp. niger
#=GS A0A080UQI6/635-688  DE Sensory box protein
#=GS A0A080UQI6/635-688  DR GENE3D; fed67e54023036e168d0827f48a63916/635-688; 
#=GS A0A080UQI6/635-688  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. niger; 
#=GS A0A0H3E3Q8/635-688  AC A0A0H3E3Q8
#=GS A0A0H3E3Q8/635-688  OS Bacillus atrophaeus 1942
#=GS A0A0H3E3Q8/635-688  DE Transcriptional regulator
#=GS A0A0H3E3Q8/635-688  DR GENE3D; fed67e54023036e168d0827f48a63916/635-688; 
#=GS A0A0H3E3Q8/635-688  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus atrophaeus; 
#=GF TC 0.0 0.0E+00
#=GF SQ 12
G4EU16/634-688              NIEGEKLSVAVEKFEAHLIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLAN
E1UKF5/632-685              -VEGEKLSQAVEKFEAHVIQKTLEKHKFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A1A5V8U4/632-685          -VEGEKLSQAVEKFEAHVIQKTLEKHKFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A172XKA3/632-685          -VEGEKLSQAVEKFEAHVIQKTLEKHKFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A1L6CED6/632-685          -VEGEKLSQAVEKFEAHVIQKTLEKHKFNRTKTAKALGVSIRNLYYKMDKYGLAN
P54529/635-688              -IEGEKLSVAVEKFEAHLIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A199WK86/635-688          -IEGEKLSVAVEKFEAHLIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A0A0YFC7/635-688          -IEGEKLSVAVEKFEAHLIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A125UJZ2/635-688          -IEGEKLSVAVEKFEAHLIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLAN
L8AMX9/635-688              -IEGEKLSVAVEKFEAHLIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A080UQI6/635-688          -IEGEKLSSAVEKFEAHVIQQTLEKHRYNRTKTAKALGVSIRNLYYKMDKYGLAN
A0A0H3E3Q8/635-688          -IEGEKLSSAVEKFEAHVIQQTLEKHRYNRTKTAKALGVSIRNLYYKMDKYGLAN
#=GC scorecons              0799999949999999969969999958999999999999999999999999999
#=GC scorecons_70           _*******_*****************_****************************
#=GC scorecons_80           __******_********_**_*****_****************************
#=GC scorecons_90           __******_********_**_*****__***************************
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