# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/266023
#=GF DE Transcriptional regulatory protein CitT
#=GF AC 1.10.10.10/FF/266023
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 62.017
#=GS Q9KRN2/161-221      AC Q9KRN2
#=GS Q9KRN2/161-221      OS Vibrio cholerae O1 biovar El Tor str. N16961
#=GS Q9KRN2/161-221      DE Transcriptional regulatory protein
#=GS Q9KRN2/161-221      DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS Q9KRN2/161-221      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS Q9KRN2/161-221      DR GO; GO:0000156; GO:0000160; 
#=GS O34534/158-225      AC O34534
#=GS O34534/158-225      OS Bacillus subtilis subsp. subtilis str. 168
#=GS O34534/158-225      DE Transcriptional regulatory protein CitT
#=GS O34534/158-225      DR GENE3D; 980afc78ca855d8247e68782ec62fefa/158-225; 
#=GS O34534/158-225      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A132BFV3/164-223  AC A0A132BFV3
#=GS A0A132BFV3/164-223  OS Bacillus malacitensis
#=GS A0A132BFV3/164-223  DE Transcriptional regulator
#=GS A0A132BFV3/164-223  DR GENE3D; 07a5aefef35536f8c9f1d427db54f0a2/164-223; 
#=GS A0A132BFV3/164-223  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus mojavensis subgroup; Bacillus malacitensis; 
#=GS A0A080UBA7/160-227  AC A0A080UBA7
#=GS A0A080UBA7/160-227  OS Bacillus subtilis subsp. niger
#=GS A0A080UBA7/160-227  DE Transcriptional regulatory protein CitT
#=GS A0A080UBA7/160-227  DR GENE3D; 26cf29453058ac441c4a4d4bcc61729a/160-227; 
#=GS A0A080UBA7/160-227  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. niger; 
#=GS A0A0H3DYS8/160-227  AC A0A0H3DYS8
#=GS A0A0H3DYS8/160-227  OS Bacillus atrophaeus 1942
#=GS A0A0H3DYS8/160-227  DE Two-component response regulator
#=GS A0A0H3DYS8/160-227  DR GENE3D; 26cf29453058ac441c4a4d4bcc61729a/160-227; 
#=GS A0A0H3DYS8/160-227  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus atrophaeus; 
#=GS L8ADV9/158-225      AC L8ADV9
#=GS L8ADV9/158-225      OS Bacillus subtilis BEST7613
#=GS L8ADV9/158-225      DE Two-component response regulator
#=GS L8ADV9/158-225      DR GENE3D; 980afc78ca855d8247e68782ec62fefa/158-225; 
#=GS L8ADV9/158-225      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A164UGS0/158-225  AC A0A164UGS0
#=GS A0A164UGS0/158-225  OS Bacillus subtilis
#=GS A0A164UGS0/158-225  DE Transcriptional regulatory protein CitB DpiA
#=GS A0A164UGS0/158-225  DR GENE3D; 980afc78ca855d8247e68782ec62fefa/158-225; 
#=GS A0A164UGS0/158-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A1B2B2D1/158-225  AC A0A1B2B2D1
#=GS A0A1B2B2D1/158-225  OS Bacillus subtilis subsp. subtilis
#=GS A0A1B2B2D1/158-225  DE Transcriptional regulator
#=GS A0A1B2B2D1/158-225  DR GENE3D; 980afc78ca855d8247e68782ec62fefa/158-225; 
#=GS A0A1B2B2D1/158-225  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A0X1KX47/161-221  AC A0A0X1KX47
#=GS A0A0X1KX47/161-221  OS Vibrio cholerae MO10
#=GS A0A0X1KX47/161-221  DE Transcriptional regulatory protein
#=GS A0A0X1KX47/161-221  DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS A0A0X1KX47/161-221  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H6E8D8/161-221  AC A0A0H6E8D8
#=GS A0A0H6E8D8/161-221  OS Vibrio cholerae
#=GS A0A0H6E8D8/161-221  DE Transcriptional regulatory protein
#=GS A0A0H6E8D8/161-221  DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS A0A0H6E8D8/161-221  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3PZ97/161-221  AC A0A0H3PZ97
#=GS A0A0H3PZ97/161-221  OS Vibrio cholerae B33
#=GS A0A0H3PZ97/161-221  DE Transcriptional regulatory protein
#=GS A0A0H3PZ97/161-221  DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS A0A0H3PZ97/161-221  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0K9V0V5/161-221  AC A0A0K9V0V5
#=GS A0A0K9V0V5/161-221  OS Vibrio cholerae 2740-80
#=GS A0A0K9V0V5/161-221  DE Transcriptional regulatory protein
#=GS A0A0K9V0V5/161-221  DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS A0A0K9V0V5/161-221  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS C3LMT1/161-221      AC C3LMT1
#=GS C3LMT1/161-221      OS Vibrio cholerae M66-2
#=GS C3LMT1/161-221      DE Transcriptional regulatory protein
#=GS C3LMT1/161-221      DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS C3LMT1/161-221      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3AFP3/161-221  AC A0A0H3AFP3
#=GS A0A0H3AFP3/161-221  OS Vibrio cholerae O395
#=GS A0A0H3AFP3/161-221  DE Transcriptional regulatory protein
#=GS A0A0H3AFP3/161-221  DR GENE3D; c65c24c14e24b9019035b29dac999a04/161-221; 
#=GS A0A0H3AFP3/161-221  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H8SDQ3/110-170  AC A0A0H8SDQ3
#=GS A0A0H8SDQ3/110-170  OS Vibrio cholerae
#=GS A0A0H8SDQ3/110-170  DE Response regulator
#=GS A0A0H8SDQ3/110-170  DR GENE3D; dcfca6d0b6402014e37cbd8749b56644/110-170; 
#=GS A0A0H8SDQ3/110-170  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS Q65P28/158-225      AC Q65P28
#=GS Q65P28/158-225      OS Bacillus licheniformis DSM 13 = ATCC 14580
#=GS Q65P28/158-225      DE Two-component response regulator
#=GS Q65P28/158-225      DR GENE3D; eb0ef82cc5c0ccb1131011db4746f03b/158-225; 
#=GS Q65P28/158-225      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus licheniformis; 
#=GS A0A0H6DBH7/54-114   AC A0A0H6DBH7
#=GS A0A0H6DBH7/54-114   OS Vibrio cholerae
#=GS A0A0H6DBH7/54-114   DE Response regulator
#=GS A0A0H6DBH7/54-114   DR GENE3D; f6b853cdca7273b46973befe45c9cb3d/54-114; 
#=GS A0A0H6DBH7/54-114   DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS D0IF59/161-211      AC D0IF59
#=GS D0IF59/161-211      OS Vibrio sp. RC586
#=GS D0IF59/161-211      DE Transcriptional regulatory protein
#=GS D0IF59/161-211      DR GENE3D; 8eaa6f1171a430b20ac41fb703c1a037/161-211; 
#=GS D0IF59/161-211      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio sp. RC586; 
#=GF TC 104.3 6.0E-34
#=GF SQ 18
Q9KRN2/161-221              ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
O34534/158-225              NSITLRKIKEALQTASEGLTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAA
A0A132BFV3/164-223          ------KIKEALCTAAGGMTAEELGEAMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYL--
A0A080UBA7/160-227          SSITLRKIKDTLRNAQQGMTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAA
A0A0H3DYS8/160-227          SSITLRKIKDTLRNAQQGMTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAA
L8ADV9/158-225              NSITLRKIKEALQTASEGLTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAA
A0A164UGS0/158-225          NSITLRKIKEALQTASEGLTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAA
A0A1B2B2D1/158-225          NSITLRKIKEALQTASEGLTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAA
A0A0X1KX47/161-221          ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
A0A0H6E8D8/161-221          ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
A0A0H3PZ97/161-221          ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
A0A0K9V0V5/161-221          ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
C3LMT1/161-221              ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
A0A0H3AFP3/161-221          ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
A0A0H8SDQ3/110-170          ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
Q65P28/158-225              NSITLQKIRDVLRDAAKGMTAEELGEKMGASRTTARRYAEYLVSKEEARAELEYGIIGRPERKYYLAD
A0A0H6DBH7/54-114           ---TLDKIR-LLFQTATMLTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYR---
D0IF59/161-211              ---TLDKIR-VLFQASGMLTADEAGEKIGASRTTARRYLEYLISSGELEADLSYG-------------
#=GC scorecons              11177499714934654479979599869999999999599976569559795995577777474211
#=GC scorecons_70           ___**_***__*__*___*****_**************_****___*__***_**__*****_*____
#=GC scorecons_80           ___**_**___*______***_*_***_**********_***____*__*_*_**__*****_*____
#=GC scorecons_90           ______**___*_______**_*_**__**********_***____*__*_*_**_____________
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