# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/189120
#=GF DE RNA polymerase sigma-70 factor
#=GF AC 1.10.10.10/FF/189120
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 11.427
#=GS Q9LD95/460-544      AC Q9LD95
#=GS Q9LD95/460-544      OS Arabidopsis thaliana
#=GS Q9LD95/460-544      DE RNA polymerase sigma factor sigF, chloroplastic
#=GS Q9LD95/460-544      DR GENE3D; f7b240578d15c3faf266bc207a9f0b34/460-544; 
#=GS Q9LD95/460-544      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9LD95/460-544      DR GO; GO:0001053; GO:0005515; GO:0006352; GO:0009507; GO:0009536; GO:0016987; GO:0045893; GO:0071482; GO:0071483; GO:0090351; 
#=GS A0A078JL81/251-335  AC A0A078JL81
#=GS A0A078JL81/251-335  OS Brassica napus
#=GS A0A078JL81/251-335  DE BnaAnng21640D protein
#=GS A0A078JL81/251-335  DR GENE3D; 1d8a9b1bee3c0c28766bc6b4d663a950/251-335; 
#=GS A0A078JL81/251-335  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078G1I1/457-541  AC A0A078G1I1
#=GS A0A078G1I1/457-541  OS Brassica napus
#=GS A0A078G1I1/457-541  DE RNA polymerase sigma factor
#=GS A0A078G1I1/457-541  DR GENE3D; 74f552cccdf27363562ceb282b884749/457-541; 
#=GS A0A078G1I1/457-541  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS D7LJA3/459-543      AC D7LJA3
#=GS D7LJA3/459-543      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LJA3/459-543      DE RNA polymerase sigma factor
#=GS D7LJA3/459-543      DR GENE3D; 7904448e26047b21f03de2a37e15c274/459-543; 
#=GS D7LJA3/459-543      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A087H377/460-544  AC A0A087H377
#=GS A0A087H377/460-544  OS Arabis alpina
#=GS A0A087H377/460-544  DE RNA polymerase sigma factor
#=GS A0A087H377/460-544  DR GENE3D; 96e9dbcebcf3cf73f03f2df23cc46f92/460-544; 
#=GS A0A087H377/460-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS M4DL32/446-530      AC M4DL32
#=GS M4DL32/446-530      OS Brassica rapa subsp. pekinensis
#=GS M4DL32/446-530      DE RNA polymerase sigma factor
#=GS M4DL32/446-530      DR GENE3D; e65743d6a8aa6cb20c81043548ed90f0/446-530; 
#=GS M4DL32/446-530      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A0D3C4P0/454-538  AC A0A0D3C4P0
#=GS A0A0D3C4P0/454-538  OS Brassica oleracea var. oleracea
#=GS A0A0D3C4P0/454-538  DE RNA polymerase sigma factor
#=GS A0A0D3C4P0/454-538  DR GENE3D; f1ddbb46a6f8fd8594028f2296874ae6/454-538; 
#=GS A0A0D3C4P0/454-538  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS V4M7N8/460-544      AC V4M7N8
#=GS V4M7N8/460-544      OS Eutrema salsugineum
#=GS V4M7N8/460-544      DE RNA polymerase sigma factor
#=GS V4M7N8/460-544      DR GENE3D; 45cee363e0bb78a26556e6e5f895daf1/460-544; 
#=GS V4M7N8/460-544      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS E4MX68/460-544      AC E4MX68
#=GS E4MX68/460-544      OS Eutrema halophilum
#=GS E4MX68/460-544      DE RNA polymerase sigma factor
#=GS E4MX68/460-544      DR GENE3D; 45cee363e0bb78a26556e6e5f895daf1/460-544; 
#=GS E4MX68/460-544      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema halophilum; 
#=GF TC 194.0 1.3E-61
#=GF SQ 9
Q9LD95/460-544              IETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD
A0A078JL81/251-335          IETPDMSVGKQMMRNHVRNLLNVLSPKERKIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLNAYAD
A0A078G1I1/457-541          IETPDMSVGKQMMRNHVRNLLNVLSPKERKIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLNAYAD
D7LJA3/459-543              IETPTMSVGKQMMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQHMNSHGLHAYAD
A0A087H377/460-544          IETPTISVGKQMMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD
M4DL32/446-530              IETPDMSVGKQMMRNHVRNLLNVLSPKERKIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLNAYAD
A0A0D3C4P0/454-538          IETPDMSVGKQMMRNHVRNLLNVLSPKERKIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLNAYAD
V4M7N8/460-544              IETPSMSVGKQLMRNHVRNLLNVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLNAYAD
E4MX68/460-544              IETPSMSVGKQLMRNHVRNLLNVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLNAYAD
#=GC scorecons              9999479999969999999999999999779999999999999999999999999999999999999999999796999969999
#=GC scorecons_70           ****_***************************************************************************_****
#=GC scorecons_80           ****_******_*****************_*********************************************_****_****
#=GC scorecons_90           ****__*****_****************__*******************************************_*_****_****
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