# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/153642
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.10.10/FF/153642
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 27.629
#=GS P45215/112-193  AC P45215
#=GS P45215/112-193  OS Haemophilus influenzae Rd KW20
#=GS P45215/112-193  DE Probable RNA polymerase sigma factor HI_1459
#=GS P45215/112-193  DR GENE3D; bd4dbdd340a5cf59107fcb7e5e99e8aa/112-193; 
#=GS P45215/112-193  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS I2NF18/102-180  AC I2NF18
#=GS I2NF18/102-180  OS Haemophilus paraphrohaemolyticus HK411
#=GS I2NF18/102-180  DE RNA polymerase sigma-70 factor, TIGR02943 family
#=GS I2NF18/102-180  DR GENE3D; f78e45d87e9230c3ea67b89f9fe542b7/102-180; 
#=GS I2NF18/102-180  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus paraphrohaemolyticus; 
#=GS F9QB18/33-98    AC F9QB18
#=GS F9QB18/33-98    OS Haemophilus pittmaniae HK 85
#=GS F9QB18/33-98    DE Sigma-70, region 4
#=GS F9QB18/33-98    DR GENE3D; 9a0dbf6cf9eeff88dd50267845da36fb/33-98; 
#=GS F9QB18/33-98    DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus pittmaniae; 
#=GS E1W4S5/128-193  AC E1W4S5
#=GS E1W4S5/128-193  OS Haemophilus parainfluenzae T3T1
#=GS E1W4S5/128-193  DE Uncharacterized protein
#=GS E1W4S5/128-193  DR GENE3D; 4821d5e15492a96fdb855e68a9879915/128-193; 
#=GS E1W4S5/128-193  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus parainfluenzae; 
#=GF TC 156.4 2.4E-50
#=GF SQ 4
P45215/112-193          KPEYHPSELQGEEETVYSDEFWLIFETCLNCLPAKQAKIFMMREFLELSSEEICQETHLTSSNLHTTLYRARLQLQNCLSKK
I2NF18/102-180          ---YYPSELQGEEEMVYSDEFWLIFETCLTCLPAKHAKIFMMREFLELSSDEICQETQLTTSNLHTTLYRARLQLQNCLSKK
F9QB18/33-98            ---------------VYSEEFWLIFETCLTCLPAKQAKIFMMREFLELSSEEICQENQLTISNLHTTLYRARLQLQNCLS-H
E1W4S5/128-193          ---------------VYSEEFWLIFETCLTCLPAKQAKIFMMREFLELSSEEICQENQLSISNLHTTLYRARLQLQNCLS-H
#=GC scorecons          0001111111111109996999999999969999969999999999999979999956963999999999999999999915
#=GC scorecons_70       _______________**************_**************************_***_*******************__
#=GC scorecons_80       _______________***_**********_*****_**************_*****__*__*******************__
#=GC scorecons_90       _______________***_**********_*****_**************_*****__*__*******************__
//