# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/103489
#=GF DE DOMINA protein
#=GF AC 1.10.10.10/FF/103489
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 17.098
#=GS Q9XTP7/405-508      AC Q9XTP7
#=GS Q9XTP7/405-508      OS Drosophila melanogaster
#=GS Q9XTP7/405-508      DE DOMINA protein
#=GS Q9XTP7/405-508      DR GENE3D; 0feae0b4aaa69a67da0762044a209b33/405-508; 
#=GS Q9XTP7/405-508      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9XTP7/405-508      DR GO; GO:0000791; GO:0000976; GO:0003700; GO:0005634; GO:0005700; GO:0005701; GO:0005730; GO:0006325; GO:0007000; GO:0007391; GO:0007400; GO:0007476; GO:0007517; GO:0008105; GO:0035050; GO:0048666; GO:0048749; GO:0048813; GO:0050832; GO:0051302; 
#=GS B4K530/435-545      AC B4K530
#=GS B4K530/435-545      OS Drosophila mojavensis
#=GS B4K530/435-545      DE Uncharacterized protein
#=GS B4K530/435-545      DR GENE3D; 191e6c2b16f4bcd1df6377066e8317cd/435-545; 
#=GS B4K530/435-545      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A0M4EV20/385-492  AC A0A0M4EV20
#=GS A0A0M4EV20/385-492  OS Drosophila busckii
#=GS A0A0M4EV20/385-492  DE Jumu
#=GS A0A0M4EV20/385-492  DR GENE3D; 2e64b2d90e665034d2a942fed35a65d1/385-492; 
#=GS A0A0M4EV20/385-492  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B3P1N8/405-508      AC B3P1N8
#=GS B3P1N8/405-508      OS Drosophila erecta
#=GS B3P1N8/405-508      DE GG17529
#=GS B3P1N8/405-508      DR GENE3D; 447f72d65e5fa8d4406e587d5921fd7f/405-508; 
#=GS B3P1N8/405-508      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4N8X3/449-553      AC B4N8X3
#=GS B4N8X3/449-553      OS Drosophila willistoni
#=GS B4N8X3/449-553      DE Uncharacterized protein
#=GS B4N8X3/449-553      DR GENE3D; 49b1a45e9fe6e77dbcc8d48a615b82f7/449-553; 
#=GS B4N8X3/449-553      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS Q29AL5/400-505      AC Q29AL5
#=GS Q29AL5/400-505      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29AL5/400-505      DE Uncharacterized protein, isoform A
#=GS Q29AL5/400-505      DR GENE3D; 772440dcc4533f0eea80dde81a39789d/400-505; 
#=GS Q29AL5/400-505      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4LW49/434-546      AC B4LW49
#=GS B4LW49/434-546      OS Drosophila virilis
#=GS B4LW49/434-546      DE Uncharacterized protein
#=GS B4LW49/434-546      DR GENE3D; 805421ab66058bcbe419a6d8f513c789/434-546; 
#=GS B4LW49/434-546      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JIM9/450-557      AC B4JIM9
#=GS B4JIM9/450-557      OS Drosophila grimshawi
#=GS B4JIM9/450-557      DE GH19127
#=GS B4JIM9/450-557      DR GENE3D; 8f2f641be03208c387fe533d6b039b13/450-557; 
#=GS B4JIM9/450-557      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4HIU0/405-508      AC B4HIU0
#=GS B4HIU0/405-508      OS Drosophila sechellia
#=GS B4HIU0/405-508      DE GM23879
#=GS B4HIU0/405-508      DR GENE3D; 94d8ccae587125d0cfe9396da917fa94/405-508; 
#=GS B4HIU0/405-508      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0R3NFN1/400-505  AC A0A0R3NFN1
#=GS A0A0R3NFN1/400-505  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NFN1/400-505  DE Uncharacterized protein, isoform B
#=GS A0A0R3NFN1/400-505  DR GENE3D; b755eddfe85dceff4535cc2e73032d38/400-505; 
#=GS A0A0R3NFN1/400-505  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4QV86/405-508      AC B4QV86
#=GS B4QV86/405-508      OS Drosophila simulans
#=GS B4QV86/405-508      DE GD18690
#=GS B4QV86/405-508      DR GENE3D; b7b6b82b7dbb624ebf14fea24f8b6a04/405-508; 
#=GS B4QV86/405-508      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4PKP4/405-508      AC B4PKP4
#=GS B4PKP4/405-508      OS Drosophila yakuba
#=GS B4PKP4/405-508      DE Uncharacterized protein
#=GS B4PKP4/405-508      DR GENE3D; cefd850789489403eff3896e321e62d9/405-508; 
#=GS B4PKP4/405-508      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B3LVZ7/404-508      AC B3LVZ7
#=GS B3LVZ7/404-508      OS Drosophila ananassae
#=GS B3LVZ7/404-508      DE Uncharacterized protein
#=GS B3LVZ7/404-508      DR GENE3D; da966139f44a747299d6b0a972bd020b/404-508; 
#=GS B3LVZ7/404-508      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GF TC 239.2 3.1E-75
#=GF SQ 13
Q9XTP7/405-508              ---------VGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEEVQKWSRKD
B4K530/435-545              -QKV-KPAAMSSAFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPERICKMDEEVQKWSRKD
A0A0M4EV20/385-492          -----KLPSGANLFPKPAFSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPERICKMDEEVQKWSRKD
B3P1N8/405-508              ---------VGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEEVQKWSRKD
B4N8X3/449-553              --------PVGNAFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPVTNGNQRKGCRWAMNPERITKMDEEVQKWSRKD
Q29AL5/400-505              -------PVVGSAFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPERITKMDEEVQKWSRKD
B4LW49/434-546              QQKVKLPAAMNSAFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPERICKMDEEVQKWSRKD
B4JIM9/450-557              -----LPAAMSSVFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPERICKMDEEVQKWSRKD
B4HIU0/405-508              ---------VGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEEVQKWSRKD
A0A0R3NFN1/400-505          -------PVVGSAFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPERITKMDEEVQKWSRKD
B4QV86/405-508              ---------VGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEEVQKWSRKD
B4PKP4/405-508              ---------VGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEEVQKWSRKD
B3LVZ7/404-508              --------PVGSAFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPVTNGNQRKGCRWAMNPERISKMDEEVQKWSRKD
#=GC scorecons              00000001255759999989999999999999999999999999999999999999999999999999999999999999799999999999999979949999999999999
#=GC scorecons_70           ___________*_**************************************************************************************_*************
#=GC scorecons_80           ___________*_**************************************************************************************_*************
#=GC scorecons_90           _____________*******************************************************************_***************_**_*************
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