PDB Information

PDB6DZP
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Zinc depletion induces ribosome hibernation in mycobacteria.
Li, Y., Sharma, M.R., Koripella, R.K., Yang, Y., Kaushal, P.S., Lin, Q., Wade, J.T., Gray, T.A., Derbyshire, K.M., Agrawal, R.K., Ojha, A.K.
Proc. Natl. Acad. Sci. U.S.A.
HeaderRibosome
Released2018-07-05
Resolution3.420
CATH Insert Date16 Dec, 2018

PDB Images (60)

PDB Prints

PDB Chains (34)

Chain ID Date inserted into CATH CATH Status
3 16 Dec, 2018 Rejected
a 16 Dec, 2018 Chopped
A 16 Dec, 2018 Rejected
b 16 Dec, 2018 Chopped
B 16 Dec, 2018 Rejected
c 16 Dec, 2018 Chopped
C 16 Dec, 2018 Holding pen
d 16 Dec, 2018 Chopped
D 16 Dec, 2018 Chopped
e 16 Dec, 2018 Chopped
E 16 Dec, 2018 Chopped
f 16 Dec, 2018 Rejected
F 16 Dec, 2018 Chopped
g 16 Dec, 2018 Write scan list
G 16 Dec, 2018 Holding pen
H 16 Dec, 2018 Holding pen
I 16 Dec, 2018 Chopped
J 16 Dec, 2018 Chopped
K 16 Dec, 2018 Chopped
L 16 Dec, 2018 Chopped
M 16 Dec, 2018 Holding pen
N 16 Dec, 2018 Chopped
O 16 Dec, 2018 Holding pen
P 16 Dec, 2018 Chopped
Q 16 Dec, 2018 Chopped
R 16 Dec, 2018 Chopped
S 16 Dec, 2018 Chopped
T 16 Dec, 2018 Chopped
U 16 Dec, 2018 Chopped
V 16 Dec, 2018 Chopped
W 16 Dec, 2018 Chopped
X 16 Dec, 2018 Holding pen
y 16 Dec, 2018 Chopped
Z 16 Dec, 2018 Chopped

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
6dzpa00 28 Feb, 2019 3.30.1390.20 Assigned
6dzpb00 28 Feb, 2019 Holding pen
6dzpc00 28 Feb, 2019 2.20.28.120 Assigned
6dzpd00 28 Feb, 2019 1.10.287.3980 Assigned
6dzpD00 28 Feb, 2019 Holding pen
6dzpe00 28 Feb, 2019 Holding pen
6dzpE00 28 Feb, 2019 Holding pen
6dzpF00 28 Feb, 2019 Holding pen
6dzpI00 28 Feb, 2019 3.30.70.1730 Assigned
6dzpJ01 28 Feb, 2019 3.30.1550.10 Assigned
6dzpJ02 28 Feb, 2019 1.10.10.250 Assigned
6dzpK00 28 Feb, 2019 Holding pen
6dzpL00 28 Feb, 2019 2.40.150.20 Assigned
6dzpN01 28 Feb, 2019 3.90.1170.10 Assigned
6dzpP01 28 Feb, 2019 3.30.420.100 Assigned
6dzpQ00 28 Feb, 2019 Holding pen
6dzpR00 28 Feb, 2019 Holding pen
6dzpS00 28 Feb, 2019 Holding pen
6dzpT00 28 Feb, 2019 3.90.470.10 Assigned
6dzpU00 28 Feb, 2019 3.30.70.330 Assigned
6dzpV00 28 Feb, 2019 Holding pen
6dzpW01 28 Feb, 2019 Holding pen
6dzpW02 28 Feb, 2019 Holding pen
6dzpy00 28 Feb, 2019 Holding pen
6dzpZ00 28 Feb, 2019 Holding pen

UniProtKB Entries (28)

Accession Gene ID Taxon Description
A0QS45 RL11_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L11
A0QSD6 RL22_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L22
A0QSD4 RL2_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L2
A0QYU7 RL35_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L35
A0R150 RL27_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L27
A0QSF9 RL14_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L14
A0QSD1 RL3_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L3
A0QSD8 RL16_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L16
A0QSG0 RL24_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L24
A0QYU6 RL20_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L20
A0QSD9 RL29_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L29
A0R552 A0R552_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L28
A0QSG4 RL6_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L6
I7FGD9 I7FGD9_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L18
A0QSG1 RL5_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L5
A0R551 RL332_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L33 2
A0QSL9 RL17_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L17
A0QSP8 RL13_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L13
A0R7K0 RL34_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L34
A0QSG8 A0QSG8_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L15
A0QSD3 RL23_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L23
A0QV42 RL19_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L19
A0QS62 RL10_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L10
A0R554 A0R554_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L31
A0R3D2 A0R3D2_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L25
A0R7F6 RL9_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L9
A0QSD2 RL4_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L4
A0QSG7 RL30_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L30